Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1021 |
Symbol | |
ID | 4201964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1172854 |
End bp | 1173396 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081902 |
Product | DNA-binding protein |
Protein accession | YP_695467 |
Protein GI | 110800489 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000053147 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATTG GTTATAGGCT ACAAAAATTG CGAAAGAAAA GAAAATTAAC TCAAAAGGCT TTAGCTGAAA TGACAGGTAT ATCTCGTTCT TATCTCTCAG ATATAGAACA TAACAGGTAT AACCCTAGCT TTGATACTAT TGAGGCATTA GCCACATCTC TAAAGCTTGA TTTAAAATCA TTTTTTGATG ATACTCTCTT AGAAGAAGAT TATTATTTAA AACCTCTAAA TGAAGAGCTA GAAGATGAAA GATTTGAAGA AATTGAGGAG CTTTCTGAAA ATGAAATTAT TGAAAAGCAA ATAATTAACA ATGATTTGAA TACTTCTTAT AAAACTAGCT CCCTTTCAAA AAAGGAAACC TTAAATATTA AAGCAGATTT AGAGAAAACT CTAAATAACT TAGATAATTT TGAAAAGAAT ATAGCCTTTG AGGGGTTCCT CTTAGATGGT GAAACAAGAA AAGCTTTTAA GGAAAGCTTA GAACATTCAA TGAAAATGGC AAAACTAATT GCCAAAAACA AATTTTCTTC TAAAGCAAAT TAG
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Protein sequence | MFIGYRLQKL RKKRKLTQKA LAEMTGISRS YLSDIEHNRY NPSFDTIEAL ATSLKLDLKS FFDDTLLEED YYLKPLNEEL EDERFEEIEE LSENEIIEKQ IINNDLNTSY KTSSLSKKET LNIKADLEKT LNNLDNFEKN IAFEGFLLDG ETRKAFKESL EHSMKMAKLI AKNKFSSKAN
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