| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0875 |
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| Symbol | |
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| ID | 4203870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1038706 |
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| End bp | 1042596 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081757 |
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| Product | putative hyaluronoglucosaminidase |
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| Protein accession | YP_695324 |
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| Protein GI | 110800876 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.316601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA GGGATTTTAG AAAAAAGTTA ACTATGTGTT TAGCATCTGT TATGGCTTTA
AACCTAGGTA TAAGTGTATC GGTAAAAGCT GATGAGGGAT TAAAAAATGA GATTAAGAAT
AATGATATTA CTAAAGATAT AAGTATATAT CCAACTCCTA AGGATATGAC TGTAGGAAAT
AGTGAATTTA CCTTAGAAGA TTCAGTTAAT ATAGTTGGAG GAGATTTAGC AGATACATAT
GCCTTTGAAC TTTTGAAAAA TATGTTAACT GAATTTGGCA TAAAAATTAA TGAATCAGAA
ATTGAGGGGG CTACTACTAT TTATATAGGA GAGAGCGATG ACAATATTGA AGAGATGGAA
AATACATTAG AAGAAATGAA TGTAGACACA TCTTCAATAA GCAAAGATGA GGGCTATGTA
TTAGTAACTG ATGAAAATAC AGAGGGAAAT AAAATAGTTA TAAGAGGAAA TGATGAAACA
GGAACTTTTT ATGGGGTAAA AAGTTTAAAG CAATTAATTA AAAAGGAAGA TAATAAGGTT
ATCTTAGATG AAGTTGTTAT AAAAGATGAG CCGAGTTTTA AAATGAGAGC TGTAGTTGAA
GGTTTCTATG GAACACCATG GTCTCAAGAG GAAAGATTGG ATCAAATAAA AATGTATGGA
GAATATAAAA TGAATGCTTA TATATACGCT CCAAAGTCAG ATCCATATCA TAGAGAAAAG
TGGAGAGAGC CTTATCCAGC TTCTGAATTA GATAGAATGA AAGAACTTAT AAAAACAGCT
AATGAAAATA AGGTTGATTT TGTTTTTGCA ATATCACCAG GTTTAGATAT AAAGTTTGAG
GGAGAAGAGG GAGAAGCAGA TTTTAAAGCT TTAATAAATA AAGCGGAGAC TCTATATGAT
ATGGGAGTTA GAAGCTTTGC AATTCTTTGG GATGATATAG AGAATCGTAG TGGAGTTCAA
CAAGCAGAAG TTTTAAATAG ATTTAATAAA GAATTTATAA AAAATAAAGA AGGGGTTAAG
CCATTAATAA CTGTCCCAGT AGAATATTGG GGAAGCTCAA TGTTTAATGG AGAAGAGGTA
AAGACATATA CTAAAGAATT TGCAGAAACT TTAGATAAGG ATATTGAAGT AATGTGGACA
GGAAATGATG TAATTCCTCC AAATGGAGTT AGCTTAGAGG ATGCAAAGAA GGTTTCAAAT
GTATATAATA GAAAAATGAT GTTATGGTGG AATTATCCTG TTAATGATTA TAAAGAGGAT
AAAATGGCTT TAGGACCAAT ATATGATTTA GATAGAAATT TAGATGAGGA AGTGTCAGGA
TTCATAGTTA ATCCTATGAG ATTTTCTGAT GCATCAAAGA TTTCCACATT AACAGGAGCT
GATTATGGAT GGAATTCAGT TTCATATGAA GCAGAAAAAT CATGGGACAA AGCTATTGAA
ATTATTGCAG GAGAAATGAA AGAAGAATTT AAGATTTTTG CTAATCATTC AACTAGATTA
GATACAGGAA GACCAGATTC ACCAGAGATT AAAAATACTA TAGATAGCTT ATGGGAAAAG
TGGGAAGCAG GTTCTGATAT TAGTTTAGAA TTAAGTAATT TACAAAATGA GTTTTCTAAA
ATGGTTCAGG TACCAAATAA ATTAAGAAGT AATTTAGAAA ATAAAGCTTT ATTAAATCAA
TTAGATTCAC ACTTATCAAA GTTTGAGATT TATGGAAATG CTGGACTTAA ATCCATAGAA
ATATTACAAG ATATAGTAAA TAAGGATATG TCAGAGTTCT GGAGTGATAA TTTTGAAGGA
ATAAAACTTC TTAGAAATTT AGATGGAATA AAAGCCACAA TTGCTAACAA TGTGGTGGAT
CCATTTATAA GAAAAGTCCA TGAAGTTGGA AATGAATATT TCAATAAGGA AACTACTGTT
TTAGAGGAGA AGGAATATTC TTATACATCA ATTGGAAATA TTGCTGACCA TAAATATTCA
GAATGGTTTA TTTCTGAAGA AACGCACGTT CCAAATTATA TGTTTGATGA TAAAGATAAT
ACAGGCTTCT GGTCAGCAGC ACCAGTACAA AAGGATGAGT TCATAGGATT TGATTTAGGT
GAAGCTGAAG AGATTAAAGA CATATATCTT CTTATGGGAA GAAATAATAA TGATACAGAT
GTTTTAACAA ATGGAGTAAT AGAGTATTCA TTAGATGGAG AAAATTGGAC AGAGTTAGAA
GTTAATAAGG GAGAGAGAGA ATTACTAGTT GAAACAGGAA TAAAAGCTAG ATTTATAAGA
TATAGAGCTC TTTCAGACTC TGAAAATAAG TTATATGTTA GAGATTTTAA AGTTAATACT
GGAAAGAGTA AGGAAAAATT AATAGGAAAT GTAGAAGTTA AAGACTCAAA TATTAATAAG
TCTTCAGAGG GAGAAAATGA AATTATATCT GCAAGTAATA TAAATAAGAT TTCCTTTGAA
GAGGGAGATT CTATAGGACT TGCTATAAAT GATGTTAAAA ATGTAATTGG ATTTGAAGTC
TTAGGAGATG TAGAAAGTAA TAAATTTGTA TTAGAAAGTT CCTTTGATAA TATAGAGTGG
GAAGAAGTTT GCAATGGAAC TAGCTTTAAA GATGAGACTC CTTTAGTAGG AAAGTTCTTT
AGAATAAGAG CGAAGGAAAA AACTGAAGCT AATATTAATG AAATTAAGAT TTCATTAGAA
GGATATTCTA AGGGAATAGT TTCGACAAAT AGAAGAATAA GCTCAAACGC AAATATACAT
CCTGATTTTG TTGCTGATAA TGATTATGGT ACATCTTTTG TATGCTCAGA TACTATTAAA
AAAGGTGACT TTGTACAATT AGATCTTGGG GTAGAAAAGA AAATTAGAGA TATAAGCTTA
GTTCAAGGAC CAGGCGGAGA TTATATGGAT GGAGATATTG AGTATTCTTT AGATGGAGAA
AATTGGACAA AGTTAGGTGT TGTAGAAGGA ACTGATACCT TAATAAAAGA TTTAGATGTA
AAAGCTAGAT ATGTTAGAGT TATTTCAACT GGATATAAGG ATCGTTGGTC TAGAGTTAGA
GAATTTACTG TAAACAAAAC AGTAAAAGAA TTCGAGACTA AGGCTACTTC AGAGGGAACT
TATACAGATA GAAGTGAGAA TATAAGAGAT AATAATTTAA ATTCTGCATA TATACCAGAA
GGTGAAATTA AGAGTGGAGA TTATCTTCTA CGTAGAATTT TTAATGAGAG ACTAGTTTCA
AAAGTTACAG TTGCTCAGAG TACAGATAAT TTATCAGGAG CGAAAGTTAT TGGAAAGACT
GTAAATGGAG AAACTTTAGA CCTTGGAGTA TTAGATAAGG GATTAAATGA GCTTGTTCTT
AAGAATCCAA GACAATTAGT ATCTGTAAAG TTAGTGTGGG AAAAAGATGC TGGAAAGGTG
GAAATCTTTG AAGTAAAACC TACCTTTGTA TCTTTAGATT CTATAATTGA AGATATTAAA
AATGAAATTC AGCGTGGAAA AGATATTTTA GTTGAGAATA AAGATAAAAA AAATGAAGAA
AGAACTCAGT TAGAAGAAGC ATTAAAAAAT ATTGAGAATT TATTAAATAA TAAAGCTTCA
GATGATGAGA TTGTAAGAGC ATATGAGGAT TTAACAAATA AAATAAATAA CTTTATTGAT
TCAGAGTCAA ATAAAGAAGA GAATAAGCCA AGTAAACCAG AAGGTGGAGA AAATGGTTCT
GAAGGTGAAG GAGACAAAGA AGACTCTGGA GATAAGAATG AAAATGAAGA TAATAAGGAT
GAGAATGGAA ATCTTCCAAA CACTGGATCA CCTTTAGGAG CAGGTGAGTT AATGCTAGTA
GGTGCAGCTT TGGCTACACT TGGAGGAGTA ACTATTAAAA AGAAAAAGTA A
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| Protein sequence | MIKRDFRKKL TMCLASVMAL NLGISVSVKA DEGLKNEIKN NDITKDISIY PTPKDMTVGN
SEFTLEDSVN IVGGDLADTY AFELLKNMLT EFGIKINESE IEGATTIYIG ESDDNIEEME
NTLEEMNVDT SSISKDEGYV LVTDENTEGN KIVIRGNDET GTFYGVKSLK QLIKKEDNKV
ILDEVVIKDE PSFKMRAVVE GFYGTPWSQE ERLDQIKMYG EYKMNAYIYA PKSDPYHREK
WREPYPASEL DRMKELIKTA NENKVDFVFA ISPGLDIKFE GEEGEADFKA LINKAETLYD
MGVRSFAILW DDIENRSGVQ QAEVLNRFNK EFIKNKEGVK PLITVPVEYW GSSMFNGEEV
KTYTKEFAET LDKDIEVMWT GNDVIPPNGV SLEDAKKVSN VYNRKMMLWW NYPVNDYKED
KMALGPIYDL DRNLDEEVSG FIVNPMRFSD ASKISTLTGA DYGWNSVSYE AEKSWDKAIE
IIAGEMKEEF KIFANHSTRL DTGRPDSPEI KNTIDSLWEK WEAGSDISLE LSNLQNEFSK
MVQVPNKLRS NLENKALLNQ LDSHLSKFEI YGNAGLKSIE ILQDIVNKDM SEFWSDNFEG
IKLLRNLDGI KATIANNVVD PFIRKVHEVG NEYFNKETTV LEEKEYSYTS IGNIADHKYS
EWFISEETHV PNYMFDDKDN TGFWSAAPVQ KDEFIGFDLG EAEEIKDIYL LMGRNNNDTD
VLTNGVIEYS LDGENWTELE VNKGERELLV ETGIKARFIR YRALSDSENK LYVRDFKVNT
GKSKEKLIGN VEVKDSNINK SSEGENEIIS ASNINKISFE EGDSIGLAIN DVKNVIGFEV
LGDVESNKFV LESSFDNIEW EEVCNGTSFK DETPLVGKFF RIRAKEKTEA NINEIKISLE
GYSKGIVSTN RRISSNANIH PDFVADNDYG TSFVCSDTIK KGDFVQLDLG VEKKIRDISL
VQGPGGDYMD GDIEYSLDGE NWTKLGVVEG TDTLIKDLDV KARYVRVIST GYKDRWSRVR
EFTVNKTVKE FETKATSEGT YTDRSENIRD NNLNSAYIPE GEIKSGDYLL RRIFNERLVS
KVTVAQSTDN LSGAKVIGKT VNGETLDLGV LDKGLNELVL KNPRQLVSVK LVWEKDAGKV
EIFEVKPTFV SLDSIIEDIK NEIQRGKDIL VENKDKKNEE RTQLEEALKN IENLLNNKAS
DDEIVRAYED LTNKINNFID SESNKEENKP SKPEGGENGS EGEGDKEDSG DKNENEDNKD
ENGNLPNTGS PLGAGELMLV GAALATLGGV TIKKKK
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