| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0815 |
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| Symbol | |
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| ID | 4202623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 963334 |
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| End bp | 966717 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638081699 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_695266 |
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| Protein GI | 110799293 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4724] Endo-beta-N-acetylglucosaminidase D |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA GAGGCATTAT GAGTAAACGT TTGCTAGCGG TTTTGTGCAT GGCATCAGTA
ACAACATCAT TAATTAGTTT TAGAGGATTA GAAGTTAAGG CTTCACCAAA TGTGCCATAT
GATCAAAAAG AATCATTAGC ACCATTAGGA GAAGTTTATA GCATTGAAAC TTTATTAAAT
TGGACACCGG AAAGTGATCC AGATGCTAAG TATAATAGAG CAAGCATTGA GCTTCAAGAT
AGGTTTATGG GAGACATTGT AAATGAAAAT GCTAATCCAG AAGCTAAAAT AATGAATGTT
GCTTTAACTA ATCCATATGT TGATAGAGCA CCATCACAAG GTAGTGATTC AATGGATGCT
TATGTGTTTT CATATTGGCA GTATGTAAAT TCATATGTTT ATTGGGGAGG ATCAAGTAGA
GGAATATTTG CACTTCCAAC ACCAGATGTA GTTGATAATG CACATAAAAA TGGTGTTCCA
GTTTTAGCTA CAATAGGATT TCCATGGGGG CCAGGAGAAG GGTATGTTGA ACAAGTAAGA
GCATTCCTTC AAAAAGATAA GAATGGAAAC TTCCCAGTTG CAGACAAAAT GATTGAAATA
GCTGAATATT ATGGATTTGA TGGATATTTC TTTAACCAAG AATCCTATGG CTGTGTAAAA
GATGATGCAG ATAGAATGGT AGAAATGCTT GAGTATATCA AAAAGAAAGC TCCAAATATG
GTTATAGGTT GGTATGATTC TATGACTGTT GATGGAAATG TTAAGTGGCA AGATGCTTTA
AATGATAAGA ATGCTGCTTT CTTCCAAAAT GGAGAAAATA GAACAACTGA CGAATTCTTT
TTAAATTATA ATTGGACTCC AGAAAAAATA GAGACTACAG TTAATACTGC TAAATCATTA
GGAAGAAGTC CTTTTGATGT TTATGCAGGA TTAGATGTTC AACAAAATGC ATATAATACT
CCATTTAATG ATGATTACTT ATTAGATGAG AATGGAAAGC TTAGACTTTC TTTAGCTATG
TATACTCCAA ACTCAACATT CTCAATGGCT AAGGATGTTT ATGATTTCTA TAAACATGAT
CAAAAATTCT GGGTAGGACC AACAGGAGAC CCATCAAAAT CAGATACAGA GCAAGATTGG
ACAGGATTAG CTAACTATGT TCCAGATAGA TCAGCAATAA ATGATTTACC ATTTGTGACA
AACTTTAATT TAGGACATGG GGAAGATTAT TATATAGATG GTTCACTTTC AAGGGATGAA
GAGTGGAACA ATAGAGCAAT GCAAGAATAT TTACCAACTT GGAGATGGAT AGTTGAATCA
AATGGTTCAA AACTTACTCC AGATTTTGAC TTTAAAACTG CATACAATGG AGGAAGTTCA
TTAAAGGTTG AAGGTAAGTT AGAGGCTGCA AATCCAAACC ACATTAAGTT ATACAGCACT
GATTTAAATA TAGAGAATAA CTCAACAGAA TTATCAATTG TTTATAAAAC AGAATCAGCT
CCAAACATGA AAGTAGGATT ATGTTTTGGA GAAAATTATG ATGAAGAAAA CTTTACATTC
TTTGATGTAA ATAAAAATAG TAATGGAGAA TGGACAGAGG TTAAAATACC TTTAGGTGAC
CATGTTGGAA AAACAATTTC TGCAATATCA TTAAAGTTTG AAAGTGGTCA AGATGTTGAA
AACTTTAAGA TAAATGTAGG ACAAATCTCC ATAGAAGAAA CTGCTGAAAA TAATAAAGGG
TTAAAAAATA GTGATGTTAT TTTAGAAGAA ACAATGGTTC ATAATTCAAA TAGTGCAGAG
GCTAGAATTT ACTGGAATGG ATTAGAATCA GGAAATGAAG ATGATTTAGC ATTCTATGAA
ATATATAGAA TTAAGCCAGA CGGATCTAGA GAGCTTATGG GAGCAACTCC AAATGATGCT
TACTATGTTC AAGAGTTTGA GAGATATGGA GAAGAAATGG AGTTTGACAT TGAAGTAGTT
CCTGTAGATG TAAATTATAA TAGAGGAGAA GGAAAGAGAG TAACATTTAA TTGGGGAATT
CCTCATGATG CTACACAAAT TCCAGATAAA AAGGTTTATG AAAACCTTGC CTTATATAAA
TCAGTTCAAA CTAGTGCAGA AGGTGCTGCA GAACCAGGTC TTAAAGCCGT TGATGGAAAA
GTAGATAATA ATAGTAAGTG GTGTGCCGCT GGAGCTAAGG ATGGTTGGTT AACAATTGAC
TTAGGAGAGC CAAAAAATAT TCAAAGATGG GTTGTTAAAC ATGCTGAAGC TGGTGGAGAA
GCAAAAGATA TGAATACAAA AGATTTTGCT TTAGAAGTTT CATATGATGG AGGACAAACT
TATCAAGAGG TTGATGTTGT AACTGGAAAT GAGGATGCTA TTACTGATAG AAATCTAGAA
AATCCAATAG TTGCACAACA TTTAAGACTT AGAATTGATA ATTCAGGAAG TTCACCTTGG
GCAGCTATAA GAATATACGA GTTCCAATTA TATGAGGAAA CATTTAAAGA TCAAACAACT
GAGATTCCAA TGAGATTTGT AAATGCTAAA AATAATAAAG GGGCTAATGA CTCTGTATTA
TTTACAAGAG GTAAAGAAGG ACAAACTGTT AATCTTTATA AGGGATTAAA TGCTGAAACT
CCTTTTGCTA CAGCTACTAT AGACTCTAAT GGAGAAGCTA AATTTGAAGG ATTAGATTTT
GGTGAAGATG GTGGAAGAGT TTACTATGGA ACAGTTGAAG AAGGTAAGAG AGAAAGTTTA
AGAATGAGTG CTGCTTTTGA AGGAGAAAAT TGGGAATATT CAAAGGTTCC AGAAAGATTT
GAATTAACTC CTTACAAGGC ACCAGGAATG AATGGAGAAA ATCATAATTA TGGTACTTTA
AAAATAAATG ATTTAGAAGC TGGAGATATT GTAAGCATAT TTAATGACAA GGATTCAATA
TTCCCAGAGA AGGTTAGTGT TCCAGTAGCC AAAGGGGGAG ATACAGCTAT TTTAGATAGA
ATATCTATTA ATCCAGAGGG TGGAGTACTA ACATTAGAAG TTAAATCAGA AGGCAAGAAG
GCTAGAAGAA TTGAAGTTCC ATATTCAGGT TTTGGAGAAA TAGAAATGAA AATAGAAAGT
GAAGCACCTA CTAACTTAAG AACAGTAGAT GTTCAAAAGA AGAGTGTAAG TCTTGCTTGG
GATTCACCAG AAAATACTTA TGGATTAGAT GGATATATAA TCTATAAGGA TAACAAGAAA
GTTGGAGAAG TTTCAGCAGA TCAAACTGAA TTTACAGTTG GAAAGTTAAA CAGACATACA
ATTTATAACT TTAAAGTTGC TGCTAAGTAT TCTAATGGAG AAATTTCAAA AAGAGATACA
ATAACAGTAA GAACAGCTAG ATAG
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| Protein sequence | MRKRGIMSKR LLAVLCMASV TTSLISFRGL EVKASPNVPY DQKESLAPLG EVYSIETLLN
WTPESDPDAK YNRASIELQD RFMGDIVNEN ANPEAKIMNV ALTNPYVDRA PSQGSDSMDA
YVFSYWQYVN SYVYWGGSSR GIFALPTPDV VDNAHKNGVP VLATIGFPWG PGEGYVEQVR
AFLQKDKNGN FPVADKMIEI AEYYGFDGYF FNQESYGCVK DDADRMVEML EYIKKKAPNM
VIGWYDSMTV DGNVKWQDAL NDKNAAFFQN GENRTTDEFF LNYNWTPEKI ETTVNTAKSL
GRSPFDVYAG LDVQQNAYNT PFNDDYLLDE NGKLRLSLAM YTPNSTFSMA KDVYDFYKHD
QKFWVGPTGD PSKSDTEQDW TGLANYVPDR SAINDLPFVT NFNLGHGEDY YIDGSLSRDE
EWNNRAMQEY LPTWRWIVES NGSKLTPDFD FKTAYNGGSS LKVEGKLEAA NPNHIKLYST
DLNIENNSTE LSIVYKTESA PNMKVGLCFG ENYDEENFTF FDVNKNSNGE WTEVKIPLGD
HVGKTISAIS LKFESGQDVE NFKINVGQIS IEETAENNKG LKNSDVILEE TMVHNSNSAE
ARIYWNGLES GNEDDLAFYE IYRIKPDGSR ELMGATPNDA YYVQEFERYG EEMEFDIEVV
PVDVNYNRGE GKRVTFNWGI PHDATQIPDK KVYENLALYK SVQTSAEGAA EPGLKAVDGK
VDNNSKWCAA GAKDGWLTID LGEPKNIQRW VVKHAEAGGE AKDMNTKDFA LEVSYDGGQT
YQEVDVVTGN EDAITDRNLE NPIVAQHLRL RIDNSGSSPW AAIRIYEFQL YEETFKDQTT
EIPMRFVNAK NNKGANDSVL FTRGKEGQTV NLYKGLNAET PFATATIDSN GEAKFEGLDF
GEDGGRVYYG TVEEGKRESL RMSAAFEGEN WEYSKVPERF ELTPYKAPGM NGENHNYGTL
KINDLEAGDI VSIFNDKDSI FPEKVSVPVA KGGDTAILDR ISINPEGGVL TLEVKSEGKK
ARRIEVPYSG FGEIEMKIES EAPTNLRTVD VQKKSVSLAW DSPENTYGLD GYIIYKDNKK
VGEVSADQTE FTVGKLNRHT IYNFKVAAKY SNGEISKRDT ITVRTAR
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