Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0808 |
Symbol | |
ID | 4203867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 958023 |
End bp | 959036 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638081692 |
Product | putative ferrichrome ABC transporter, permease protein FhuB |
Protein accession | YP_695259 |
Protein GI | 110800873 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAG GAAGGAAAAG GACCTTGGCT TATGGATTAA TGTTTATAGG TTTATTACTT TTGCTTAGTG GAATCATTCT ATCTATATCT ATAGGGGCAA AAGAAATTGA TTTTTCTATG ATAATAAATG CTATTTTTAC AAATGATGCA GATATAAATA CTAATATAAT TAGGGATGTA AGAATACCTA GAGCACTTGC AGCAGCTTTA GTAGGAGGAT TTTTAGCCGT AGCTGGTGCC ATCATGCAAG GAATAACTAG AAATCCAATT GCAGAACCTT CTGTAATGGG TATAACTCAA GGAGCTACAT TTATGATAGC TGTAGCATTT GTTTTACAAA GAATATATCC TAATTTAGTC ATAAATAGCT TTGCTCTTAT GATTTTTGCA TTTTTAGGAG CAAGTATAAG TGGTCTTTTA GTATATTTTA TAAGCTCTAG AGCATCTAGA AAAGTTGATC CTGTTAAGTT AGCCCTTGCA GGGACAGCCT TAGGAACTTT ACTTATATCC TTAGCAATGG GAATATCAAT GTATTTTAAT TTATCTCAAC AGTTAAGTTT CTGGGTATCA GGTGGATTAG TAAGTGCTAA ATGGGAAGGG GTAATTTTAT TATCTTTAAT TGGAGGAATA GCATTTATTG GGGCCATGAT TATGTCACCT AGAATAACAA TTTTGAGTTT AGGAGAAGAA GTAGCCATAG GACTTGGAGA AAAAACCAAT CTTGTAAGAT TTATATCCAT AATGATAGTT ATATGTCTAA CAGGTGCTTC TGTTTCGGTA GCTGGTAATA TTGTCTTTGT AGGATTAATA ATTCCTCAAA TATGCAAAGG AATAGTAGGA TCTGATTATA GATATATAAT ACCTAGTTCA ATGATATTAG GTGCTGTTTT ATTAGTGTAT AGTGATATAT TAGCAAGGAT TATAAACCCT CCTTATGAAA CACCAATAGG ATCTTTAACT GCCTTATTAG GAGTTCCAGT GTTTATATAC TTAGTTAGAA AGGGAGGTAA GTAA
|
Protein sequence | MKIGRKRTLA YGLMFIGLLL LLSGIILSIS IGAKEIDFSM IINAIFTNDA DINTNIIRDV RIPRALAAAL VGGFLAVAGA IMQGITRNPI AEPSVMGITQ GATFMIAVAF VLQRIYPNLV INSFALMIFA FLGASISGLL VYFISSRASR KVDPVKLALA GTALGTLLIS LAMGISMYFN LSQQLSFWVS GGLVSAKWEG VILLSLIGGI AFIGAMIMSP RITILSLGEE VAIGLGEKTN LVRFISIMIV ICLTGASVSV AGNIVFVGLI IPQICKGIVG SDYRYIIPSS MILGAVLLVY SDILARIINP PYETPIGSLT ALLGVPVFIY LVRKGGK
|
| |