Gene CPF_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0808 
Symbol 
ID4203867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp958023 
End bp959036 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content32% 
IMG OID638081692 
Productputative ferrichrome ABC transporter, permease protein FhuB 
Protein accessionYP_695259 
Protein GI110800873 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG GAAGGAAAAG GACCTTGGCT TATGGATTAA TGTTTATAGG TTTATTACTT 
TTGCTTAGTG GAATCATTCT ATCTATATCT ATAGGGGCAA AAGAAATTGA TTTTTCTATG
ATAATAAATG CTATTTTTAC AAATGATGCA GATATAAATA CTAATATAAT TAGGGATGTA
AGAATACCTA GAGCACTTGC AGCAGCTTTA GTAGGAGGAT TTTTAGCCGT AGCTGGTGCC
ATCATGCAAG GAATAACTAG AAATCCAATT GCAGAACCTT CTGTAATGGG TATAACTCAA
GGAGCTACAT TTATGATAGC TGTAGCATTT GTTTTACAAA GAATATATCC TAATTTAGTC
ATAAATAGCT TTGCTCTTAT GATTTTTGCA TTTTTAGGAG CAAGTATAAG TGGTCTTTTA
GTATATTTTA TAAGCTCTAG AGCATCTAGA AAAGTTGATC CTGTTAAGTT AGCCCTTGCA
GGGACAGCCT TAGGAACTTT ACTTATATCC TTAGCAATGG GAATATCAAT GTATTTTAAT
TTATCTCAAC AGTTAAGTTT CTGGGTATCA GGTGGATTAG TAAGTGCTAA ATGGGAAGGG
GTAATTTTAT TATCTTTAAT TGGAGGAATA GCATTTATTG GGGCCATGAT TATGTCACCT
AGAATAACAA TTTTGAGTTT AGGAGAAGAA GTAGCCATAG GACTTGGAGA AAAAACCAAT
CTTGTAAGAT TTATATCCAT AATGATAGTT ATATGTCTAA CAGGTGCTTC TGTTTCGGTA
GCTGGTAATA TTGTCTTTGT AGGATTAATA ATTCCTCAAA TATGCAAAGG AATAGTAGGA
TCTGATTATA GATATATAAT ACCTAGTTCA ATGATATTAG GTGCTGTTTT ATTAGTGTAT
AGTGATATAT TAGCAAGGAT TATAAACCCT CCTTATGAAA CACCAATAGG ATCTTTAACT
GCCTTATTAG GAGTTCCAGT GTTTATATAC TTAGTTAGAA AGGGAGGTAA GTAA
 
Protein sequence
MKIGRKRTLA YGLMFIGLLL LLSGIILSIS IGAKEIDFSM IINAIFTNDA DINTNIIRDV 
RIPRALAAAL VGGFLAVAGA IMQGITRNPI AEPSVMGITQ GATFMIAVAF VLQRIYPNLV
INSFALMIFA FLGASISGLL VYFISSRASR KVDPVKLALA GTALGTLLIS LAMGISMYFN
LSQQLSFWVS GGLVSAKWEG VILLSLIGGI AFIGAMIMSP RITILSLGEE VAIGLGEKTN
LVRFISIMIV ICLTGASVSV AGNIVFVGLI IPQICKGIVG SDYRYIIPSS MILGAVLLVY
SDILARIINP PYETPIGSLT ALLGVPVFIY LVRKGGK