Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0714 |
Symbol | |
ID | 4201053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 848402 |
End bp | 849604 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081599 |
Product | DHH domain-containing protein |
Protein accession | YP_695166 |
Protein GI | 110799085 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.148713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAC TTTATTATGA AGATCAATAT ATAAAGGAGT TTAAAGGAGA AATAATTGAG GTTAAAGAAA TTGATGGAAA ATTCCATGTT CTTTTAGACC AAACTGCCTT TTTCCCAGGA GGGGGAGGAC AGATGGGAGA TTTAGGACTT ATTGATGGAA TTAAAGTCCT TGATGTTTAT GAAGAAGAAG GAAAAGTATA TCATGTTCTT GAAAAAGAAC CTAAAAAATT GAAAAATCTA CAATGTGAAT TAGATTGGGA AAGAAGATTT GATGGAATGC AACAGCATTT AGGACAGCAT TTACTTTCTG GATGTTTTTA TGATTTATTT GGTGCAAATA CTTGTGGTTT TCATTTAGGA AAAGAAATAA GTACAGTTGA TATTGTAGGT TTTTTAGATG AAAAAACTAT AAGAGAAGCT GAAAAAGAGG CAAATAGATT AATCTTTGAG AACTTAGAAG TAAAAAGTTA TGCTCCAAGC AAAAAAGAAT TAAAGAAAGT AAAAACTAGA AGAGCATTGC CTAAAACTGA TGAAGAAATA AGAATTGTTG AAATTGTAGG ATTAGATTTA AATGCTTGTT GTGGAGTTCA TCCAAGAAAT ACTAGAGATC TTCAAGTTAT AAAGATAAGA AGATGGGAAA AGCATAAAAA TGCTACAAGA ATAGAATATG TAGCTGGAAA TAGAGCTGTA TCTGACTTTT TCACTAAGGA TGAAATTTTA GGAGAAATAT GCAAGCTTTT AAAATCAGGA GAAGGTGATA CTTTAAACGC TGTTAAGAAT CTTTTAGAAA ATAATAAAAA TCTTGTAGAT GAAAACAGAA AAGTTAAAGC TGAAATAGGC GATTATAAGA TAAAAGAGAT GTTAAATAAA TCAGAAAGAA TAGGAAGTAT AACTTTAGTT AATGAAATTT TTGATGGTGA GGATACAAAA CATATAGGAA AGTTAGCTAA TAAAATAACT GAGGAATATG AAGCAATAGT TTTATTTGCA GTGAAAAATG GAGATAGAGT AAATTTAATT TTTAATAGTT CTAAAGATAT GAAAAAAGTT AATATGAGTG ATATATTAAA AGATACCATA ACTTTAATTG ATGGAAGAGG TGGCGGAAAT CAGTTTGCAG CTCAAGGTGG AGGAAAAAAT AATGGAAATA CAGAAGTTGC AATTGATTAT GCTACTAATA AAATAAGAAA TATTTTACTT TAA
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Protein sequence | MTKLYYEDQY IKEFKGEIIE VKEIDGKFHV LLDQTAFFPG GGGQMGDLGL IDGIKVLDVY EEEGKVYHVL EKEPKKLKNL QCELDWERRF DGMQQHLGQH LLSGCFYDLF GANTCGFHLG KEISTVDIVG FLDEKTIREA EKEANRLIFE NLEVKSYAPS KKELKKVKTR RALPKTDEEI RIVEIVGLDL NACCGVHPRN TRDLQVIKIR RWEKHKNATR IEYVAGNRAV SDFFTKDEIL GEICKLLKSG EGDTLNAVKN LLENNKNLVD ENRKVKAEIG DYKIKEMLNK SERIGSITLV NEIFDGEDTK HIGKLANKIT EEYEAIVLFA VKNGDRVNLI FNSSKDMKKV NMSDILKDTI TLIDGRGGGN QFAAQGGGKN NGNTEVAIDY ATNKIRNILL
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