Gene CPF_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0714 
Symbol 
ID4201053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp848402 
End bp849604 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content29% 
IMG OID638081599 
ProductDHH domain-containing protein 
Protein accessionYP_695166 
Protein GI110799085 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.148713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAC TTTATTATGA AGATCAATAT ATAAAGGAGT TTAAAGGAGA AATAATTGAG 
GTTAAAGAAA TTGATGGAAA ATTCCATGTT CTTTTAGACC AAACTGCCTT TTTCCCAGGA
GGGGGAGGAC AGATGGGAGA TTTAGGACTT ATTGATGGAA TTAAAGTCCT TGATGTTTAT
GAAGAAGAAG GAAAAGTATA TCATGTTCTT GAAAAAGAAC CTAAAAAATT GAAAAATCTA
CAATGTGAAT TAGATTGGGA AAGAAGATTT GATGGAATGC AACAGCATTT AGGACAGCAT
TTACTTTCTG GATGTTTTTA TGATTTATTT GGTGCAAATA CTTGTGGTTT TCATTTAGGA
AAAGAAATAA GTACAGTTGA TATTGTAGGT TTTTTAGATG AAAAAACTAT AAGAGAAGCT
GAAAAAGAGG CAAATAGATT AATCTTTGAG AACTTAGAAG TAAAAAGTTA TGCTCCAAGC
AAAAAAGAAT TAAAGAAAGT AAAAACTAGA AGAGCATTGC CTAAAACTGA TGAAGAAATA
AGAATTGTTG AAATTGTAGG ATTAGATTTA AATGCTTGTT GTGGAGTTCA TCCAAGAAAT
ACTAGAGATC TTCAAGTTAT AAAGATAAGA AGATGGGAAA AGCATAAAAA TGCTACAAGA
ATAGAATATG TAGCTGGAAA TAGAGCTGTA TCTGACTTTT TCACTAAGGA TGAAATTTTA
GGAGAAATAT GCAAGCTTTT AAAATCAGGA GAAGGTGATA CTTTAAACGC TGTTAAGAAT
CTTTTAGAAA ATAATAAAAA TCTTGTAGAT GAAAACAGAA AAGTTAAAGC TGAAATAGGC
GATTATAAGA TAAAAGAGAT GTTAAATAAA TCAGAAAGAA TAGGAAGTAT AACTTTAGTT
AATGAAATTT TTGATGGTGA GGATACAAAA CATATAGGAA AGTTAGCTAA TAAAATAACT
GAGGAATATG AAGCAATAGT TTTATTTGCA GTGAAAAATG GAGATAGAGT AAATTTAATT
TTTAATAGTT CTAAAGATAT GAAAAAAGTT AATATGAGTG ATATATTAAA AGATACCATA
ACTTTAATTG ATGGAAGAGG TGGCGGAAAT CAGTTTGCAG CTCAAGGTGG AGGAAAAAAT
AATGGAAATA CAGAAGTTGC AATTGATTAT GCTACTAATA AAATAAGAAA TATTTTACTT
TAA
 
Protein sequence
MTKLYYEDQY IKEFKGEIIE VKEIDGKFHV LLDQTAFFPG GGGQMGDLGL IDGIKVLDVY 
EEEGKVYHVL EKEPKKLKNL QCELDWERRF DGMQQHLGQH LLSGCFYDLF GANTCGFHLG
KEISTVDIVG FLDEKTIREA EKEANRLIFE NLEVKSYAPS KKELKKVKTR RALPKTDEEI
RIVEIVGLDL NACCGVHPRN TRDLQVIKIR RWEKHKNATR IEYVAGNRAV SDFFTKDEIL
GEICKLLKSG EGDTLNAVKN LLENNKNLVD ENRKVKAEIG DYKIKEMLNK SERIGSITLV
NEIFDGEDTK HIGKLANKIT EEYEAIVLFA VKNGDRVNLI FNSSKDMKKV NMSDILKDTI
TLIDGRGGGN QFAAQGGGKN NGNTEVAIDY ATNKIRNILL