Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0642 |
Symbol | |
ID | 4202096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 772148 |
End bp | 772927 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081527 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_695095 |
Protein GI | 110800332 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACG CAAAAGGCTT TGTTTTTAAA AGACAACAGG CAATATTGAA ATATTTAAAA GAAAATAAAT TTGCTAAAAC AGAAGAATTA GCTACTTTAT TAAAAACATC TAATATAACA ATAAGAAGAG ATTTTCAAAA TCTAGAAAAA GAAGGGGTTA TAAGAAGAAA ATACGGTGGT GCTGAACTTA TTGAAGGAGC TTTGAGTGAA GACCCATATT TTAATCATAC CAACATTGAA AGAGAAAAAA TTAAAGATTC TATAGCTAAA AAAGCTGCTG AATTTATAGA AGATGGAGAT AGTATATTTA TAAACTCTAG TTCAACTGCA ATAAAACTCT TAGAATATAT AGAAGATAAA AGAGTTATGG TAATTACAAA CAATGGCAAA ATATTAGGTA TGAATTTATC ACCTAATGTA GAGATAATAC TTACAGGCGG TGAAGTATAT GGAAGAAAAC AATCTATGGT TGGTGATATA GCCACTCAGA TAATTTCTAA AATAACTGCA ACTAAATGTT TTATAGGGGT TAGTGGTATA AATGCTAATA CAGGAATCAG TACATCTGTT CTCCAGGAAA CCACAGTAAA TATGAAGATG CTTGAAAATT GTAATGGGCC AACTTTTGTC TTAGCAGATA ACTCAAAAAT AGGAATACAT CATAATTTTT CTAGTGGAGA TATTTCTAAA GTTAATTATG TAATCACAAA TGAAATTGAA GATGATAAAT CTGAACTTGA AAAATTAAAA GAAAAAGGAG TAAAAATAAT ATTCTCGTAA
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Protein sequence | MKNAKGFVFK RQQAILKYLK ENKFAKTEEL ATLLKTSNIT IRRDFQNLEK EGVIRRKYGG AELIEGALSE DPYFNHTNIE REKIKDSIAK KAAEFIEDGD SIFINSSSTA IKLLEYIEDK RVMVITNNGK ILGMNLSPNV EIILTGGEVY GRKQSMVGDI ATQIISKITA TKCFIGVSGI NANTGISTSV LQETTVNMKM LENCNGPTFV LADNSKIGIH HNFSSGDISK VNYVITNEIE DDKSELEKLK EKGVKIIFS
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