Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0630 |
Symbol | |
ID | 4201904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 757763 |
End bp | 758887 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081515 |
Product | spore germination protein |
Protein accession | YP_695083 |
Protein GI | 110801303 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.635137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAA AGAAAGTTAT AGCTAGTTTA CTAAGCATAA TAATTATGTC AACCATGCTT ATTGGTTGCT ATAATTATAA GGATATAAAT AGAGTTACAT TTGTAACAAG CTTAATATTT GATGAAAATG AAGTGGGAAA TATAGATATA TATTTAGATT GTGTAAAACC TTATAGAAGT TCAAATGAAA GTTCTGATAA AGGAAGAAGA GTATTATATA AAGGTACTGG AAAAACAGTT TTAGAAGCTA TTAAGGATAT AAATATGTAT TCTAGTAGTA AGTTAGACTT TACTCAATGC AAGGGATATA TATTTACAGA GAAGGCTGCT AAAAATGGTA TAAGAAAGTA CATAGATATT ATAAATAAAA ATCAAGAATT CATGATTAGA CCTTATATGT TTGTTTTATT TGGTTCTCCA GAAGAACTTT TAAATGATGT AACTGTTGAT GAAGAATATT TAGGTGTTTT TATTGATGAT TTAGTTCAAA GGATGAATAA AAGCCCTAGA GTTATAGCTA TTGATGCTAA TGATTATTTA GAGCTTAGAA CTAATTATGG AAACCTACTA GTTTTAGGAG CATTAAGTAT AAGAGATGAT ATGGAAGAAA AAAGATTAGA GTTAAGCGGA GGAGCCTTGT TAAAAAATGA GGTCTTAGTG AGAAGAATAA CTGCAGAGGA AGGAATGAGC TATAATCTTT TAATGGGAGA TTTAAAAAGA GGAACTCTAG AAGTTATGAA CCCTCAAGAC CCTAATACTT TTATAACATT AGATATATCT AATGCAAAAA CAAAGACATC AATAAGTTAT GATGGAGAAA ATATAACTCT TTATAAGGAT ATAAAAGTTA AATGTTTAAT TGGGGAATCA CAATCAAGAC TCATTGTAGA TGAAAAACTT TTAAATCTTT TAGAGTTAGA AGAAGAGGCA GTAATAAAAC AATACTTAGA ACTTTTCTTT GAAAGCTTTA AAGAGAGTGA TATAGACATT GTAAATGTTG GTAATCTTTT TTATAGAAAA TATCCAGACG AGGTATTAGA AAAGGATCCT ATAAGCATTA CAAATTTAAA GATTAATGTT GATGTTGAAA TTGATGGCAC AACAATTACA GGAAATACAC TTTAA
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Protein sequence | MNLKKVIASL LSIIIMSTML IGCYNYKDIN RVTFVTSLIF DENEVGNIDI YLDCVKPYRS SNESSDKGRR VLYKGTGKTV LEAIKDINMY SSSKLDFTQC KGYIFTEKAA KNGIRKYIDI INKNQEFMIR PYMFVLFGSP EELLNDVTVD EEYLGVFIDD LVQRMNKSPR VIAIDANDYL ELRTNYGNLL VLGALSIRDD MEEKRLELSG GALLKNEVLV RRITAEEGMS YNLLMGDLKR GTLEVMNPQD PNTFITLDIS NAKTKTSISY DGENITLYKD IKVKCLIGES QSRLIVDEKL LNLLELEEEA VIKQYLELFF ESFKESDIDI VNVGNLFYRK YPDEVLEKDP ISITNLKINV DVEIDGTTIT GNTL
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