Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0600 |
Symbol | rfbB |
ID | 4202447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 721994 |
End bp | 723043 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081485 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_695053 |
Protein GI | 110800083 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0365968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT ACTTAGTTAC AGGTGGAGCA GGATTTATAG GATCTAACTT TGTATTATAT ATGTTAAAGA AATACAAAGA TATAAAAATA ATAAACTTAG ATAAATTAAC TTATGCAGGA AATTTAGAAA ACTTAAAATC AATAGAAAAT GATGAAAGAC ATATATTCGT TCAAGGAGAT ATATGTGATA AAGAATTAGT TTCAAGTTTA TTTGAAAAAT ATGAGATAGA CTATGTAGCT CACTTTGCAG CAGAATCACA TGTTGATAGA AGTATAAGAG AGCCAGAAGT ATTTGCTAAA ACTAATGTAT TAGGAACAGT AAATTTACTT AACTGTGCTA AAAATGCATG GGAAACAGAA GAAGGATGGA AAGAAGGAGT TAAATTCCTG CATGTTTCAA CAGATGAAGT TTATGGTTCA TTAGGAGAAA CAGGATATTT CATGGAAACA ACACCATTAG ATCCACATAG TCCATATTCA TCAAGCAAAG CAAGTTCAGA TTTAATGGTT AAGGCTTATG CAGATACATA TAAAATGCCA GTAAACATAA CAAGATGTTC AAATAACTAT GGACCATTCC AATTCCCAGA AAAACTTATA CCACTTCTAA TAAATAACTG TTTAAATCAT AAGGATTTAC CAGTTTACGG AGATGGAATG AATATAAGAG ACTGGTTATT CGTTGAAGAC CATGCAAAAG CAATCGATAT GGTAATAAAC GGGGGAAGAC TTGGAGAAGT TTACAATGTT GGTGGACATA ATGAAAGAAC TAACATACAA ATAGTAAAAA CAGTTATAGA ATACTTACAT GATAATGTAG ATGAAGAAAT AACTGAAAAC TTAATAAAGT ATGTTGAAGA TAGAAAAGGT CATGATAGAA GATACGGAAT AGATCCAACA AAGATAAAAG AAGAGTTAGG ATGGTATCCA GAAACAACTT TTGAAGTTGG AATAAAGAAA ACAATAAAAT GGTACTTAGA TAATAAAGAA TGGATGGAAA ATGTAACATC AGGAGATTAT CAAAAATATT ATGAGAAGAT GTATAGATAA
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Protein sequence | MKTYLVTGGA GFIGSNFVLY MLKKYKDIKI INLDKLTYAG NLENLKSIEN DERHIFVQGD ICDKELVSSL FEKYEIDYVA HFAAESHVDR SIREPEVFAK TNVLGTVNLL NCAKNAWETE EGWKEGVKFL HVSTDEVYGS LGETGYFMET TPLDPHSPYS SSKASSDLMV KAYADTYKMP VNITRCSNNY GPFQFPEKLI PLLINNCLNH KDLPVYGDGM NIRDWLFVED HAKAIDMVIN GGRLGEVYNV GGHNERTNIQ IVKTVIEYLH DNVDEEITEN LIKYVEDRKG HDRRYGIDPT KIKEELGWYP ETTFEVGIKK TIKWYLDNKE WMENVTSGDY QKYYEKMYR
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