Gene CPF_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0434 
Symbol 
ID4201857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp520409 
End bp521248 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content25% 
IMG OID638081318 
Productalpha/beta fold family hydrolase 
Protein accessionYP_694891 
Protein GI110798997 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATATT ATAAAGTAGT AAATAATAAA TATCTCCATA AAGATAAAGA ATGGATTCTG 
ATGCTTCATG GAATAGGTGG AAATTTAAAT ATATTTAAAA AGCAAATAGA TGTACTGTCA
GAAAATTATA ACTTACTTTT AGTAGACCTT CATGGCCATG GAAATTCACA AAATCACACT
TTGAAAAACA TGAAAAAAAC TAAAGGTGAA ATATCTTTTA AATATATTTG TGAAGATATT
GTAGAGATAT TAGATAAGTT AAATATAGAA AAAGTAAACG TATTAGGTAT ATCCCTTGGT
ACTATAGTTG GAATGCAATT TGAAAAATAT TTCCCTAATA GAGTTTCTTC TATGATATTA
GGGGGAGGAA TTGTAGGTAT GAACTTAAAG TCTAAATTTT TCTTGAATTT AGCCTTAGTT
ACAAAGAATA TTATTCCAAG GGAAATATTT TATAAAATTG TAGCTTATAT GTCAATGCCA
TGTAAAAATC ATAAGCTTTC AAGAAATATA TTTTTAAAGG CTGCTGAAAA GTTAGATAAA
AATGAATGTT TTAGATGGGT TGAGCTTATG AGGGAACATT TAGAGAATTA TAAGTATGTA
AAGAATAATG TAAAGAAAAT CTTTATTATG GGAGATCAAG ACCATGTTTT TCTTCCTACT
ATAAAAAAGT TTGTACCAGA AGAAGATATT GTTGTAATAA AAAATTGTGG ACATATATGC
AATATTGATT CCTTTAAAAC TTTTAATCAT CTTACATTAA ACTTTTTAAT AAATAATCAC
GGATATATGT TTGGGGCAAA AGAAAGAAGA AAATATGTTT ATAAGTATAA CTTTACATAA
 
Protein sequence
MLYYKVVNNK YLHKDKEWIL MLHGIGGNLN IFKKQIDVLS ENYNLLLVDL HGHGNSQNHT 
LKNMKKTKGE ISFKYICEDI VEILDKLNIE KVNVLGISLG TIVGMQFEKY FPNRVSSMIL
GGGIVGMNLK SKFFLNLALV TKNIIPREIF YKIVAYMSMP CKNHKLSRNI FLKAAEKLDK
NECFRWVELM REHLENYKYV KNNVKKIFIM GDQDHVFLPT IKKFVPEEDI VVIKNCGHIC
NIDSFKTFNH LTLNFLINNH GYMFGAKERR KYVYKYNFT