Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0434 |
Symbol | |
ID | 4201857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 520409 |
End bp | 521248 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638081318 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_694891 |
Protein GI | 110798997 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTATATT ATAAAGTAGT AAATAATAAA TATCTCCATA AAGATAAAGA ATGGATTCTG ATGCTTCATG GAATAGGTGG AAATTTAAAT ATATTTAAAA AGCAAATAGA TGTACTGTCA GAAAATTATA ACTTACTTTT AGTAGACCTT CATGGCCATG GAAATTCACA AAATCACACT TTGAAAAACA TGAAAAAAAC TAAAGGTGAA ATATCTTTTA AATATATTTG TGAAGATATT GTAGAGATAT TAGATAAGTT AAATATAGAA AAAGTAAACG TATTAGGTAT ATCCCTTGGT ACTATAGTTG GAATGCAATT TGAAAAATAT TTCCCTAATA GAGTTTCTTC TATGATATTA GGGGGAGGAA TTGTAGGTAT GAACTTAAAG TCTAAATTTT TCTTGAATTT AGCCTTAGTT ACAAAGAATA TTATTCCAAG GGAAATATTT TATAAAATTG TAGCTTATAT GTCAATGCCA TGTAAAAATC ATAAGCTTTC AAGAAATATA TTTTTAAAGG CTGCTGAAAA GTTAGATAAA AATGAATGTT TTAGATGGGT TGAGCTTATG AGGGAACATT TAGAGAATTA TAAGTATGTA AAGAATAATG TAAAGAAAAT CTTTATTATG GGAGATCAAG ACCATGTTTT TCTTCCTACT ATAAAAAAGT TTGTACCAGA AGAAGATATT GTTGTAATAA AAAATTGTGG ACATATATGC AATATTGATT CCTTTAAAAC TTTTAATCAT CTTACATTAA ACTTTTTAAT AAATAATCAC GGATATATGT TTGGGGCAAA AGAAAGAAGA AAATATGTTT ATAAGTATAA CTTTACATAA
|
Protein sequence | MLYYKVVNNK YLHKDKEWIL MLHGIGGNLN IFKKQIDVLS ENYNLLLVDL HGHGNSQNHT LKNMKKTKGE ISFKYICEDI VEILDKLNIE KVNVLGISLG TIVGMQFEKY FPNRVSSMIL GGGIVGMNLK SKFFLNLALV TKNIIPREIF YKIVAYMSMP CKNHKLSRNI FLKAAEKLDK NECFRWVELM REHLENYKYV KNNVKKIFIM GDQDHVFLPT IKKFVPEEDI VVIKNCGHIC NIDSFKTFNH LTLNFLINNH GYMFGAKERR KYVYKYNFT
|
| |