Gene CPF_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0172 
Symbol 
ID4201593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp205912 
End bp206886 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content29% 
IMG OID638081053 
Productputative esterase 
Protein accessionYP_694636 
Protein GI110801286 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.32739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTTA AGAAATTATA TGTAGGAACT ATAGATTTAT TATCAGCCAT TGTGGAAAAG 
ATAGCTAAAT GCAATTTAGC ATGTAAAATT TATAAAGCAG TCTTTCAATT GGGAGTTTTT
CCAAAGCCGA AGAACTTTGA TAAGATAGTT AGTAACCTAG TAATAGAGAA AGATATAGCT
TATGAATCAT CAATTTTAGA GGGGAATAAG TTAGATGTAT ATTATCCTAA GAATCTTAAT
AAAAAGGCGC CAATATTAAT GTGGATACAT GGTGGGGGAT ATATAGCTAA TAGTAAGGAG
ACTGTTAAGA ATTATATGAT GACATTGGCT AATAAAGGCT TTGTCGTATT TAATATAGAT
TATGCCTTAG CTCCAAAATA TAAATATCCA AGTCAAATAC TTCAATGTAA TGAAGCTTTA
AAATATGTCT TTGAAAATGC AGAAAAGTTT AATGGGGATA GAGAGAATAT TTTTATTGGA
GGAGATTCTG CTGGGGCTCA GATGGCAAGC CAGTTAGCTG CAATTATAAG CAATGAGGAA
ATATCTAATA AAATGAATTT AAAACCAAGT ATAACAAATA AGTTTTTAAG GGGAGTAATA
TTATTTTGTG GATTATATAA TATGGATTCT CTAAGGGCAA CTAAATTTCC AGGTATAAAA
ACTTATATGG AAGCATTAAC TGGGGAGAGC AATTTTGAAA ATTATGAAAG AATAGATGAA
CTAGCTACTA TTAAATATAT AACTCCTAAT TATCCAAGTA CCTTTATAAC TGTGGGAGAT
ATTGACCCCT TTGTAGATCA AGGAAAAGAG TTAGCATCTT CTTTAAGAGC TTTAGGAGTA
AAGGTTGTTT CAAGATTTTT TGAAAATAAA GGACTTTGGC ATGAATATCA ATTTAAATTT
TCAGTTAAAG AAGCTAGAAA AACCTTTAAA AGTGTAATTG AATTTTTAAA TGATAATAGT
AAAAGTATGA ATTAA
 
Protein sequence
MWFKKLYVGT IDLLSAIVEK IAKCNLACKI YKAVFQLGVF PKPKNFDKIV SNLVIEKDIA 
YESSILEGNK LDVYYPKNLN KKAPILMWIH GGGYIANSKE TVKNYMMTLA NKGFVVFNID
YALAPKYKYP SQILQCNEAL KYVFENAEKF NGDRENIFIG GDSAGAQMAS QLAAIISNEE
ISNKMNLKPS ITNKFLRGVI LFCGLYNMDS LRATKFPGIK TYMEALTGES NFENYERIDE
LATIKYITPN YPSTFITVGD IDPFVDQGKE LASSLRALGV KVVSRFFENK GLWHEYQFKF
SVKEARKTFK SVIEFLNDNS KSMN