| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM00880 |
|---|
| Symbol | |
|---|
| ID | 3255116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | - |
|---|
| Start bp | 256724 |
|---|
| End bp | 258338 |
|---|
| Gene Length | 1615 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638254239 |
|---|
| Product | DNA polymerase processivity factor, putative |
|---|
| Protein accession | XP_568321 |
|---|
| Protein GI | 58261822 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTATCGTCAA AAACTCACTT CATCGATTTC TCCATTCACT CAACAAAACA CAAGATGCTT
GAAGCACGCG TAAAACAAGC TGTAGTCCTC AAGAAACTCT TGGATGGTAG GCCTCATTTC
CGCTTCAATT GAAGACTAAG GCCCACAGCC TACGCGTCGG TATTGCAAGA TATCTTCGCG
TCGTTAGCTT CCACAACACT ACGGAGAACG TGATGCTGAC AATATGCTGT AGCTATCAAG
GAACTTGTCT CTGATGGTAA TCTCGATTGT ACTGAGGAAG GTATCGTGAG TATCTTTCAA
GGGCGCGCGT CGCGCCCATC GACGCGTTGA TTGTAATGAG TCTGACGGAG TCTTGTTAGT
CTCTTCAAGC CATGGACAAT TCCCATATCG CTTTGGTCGC CCTAAAGCTT GAAGCTTCCG
AATTTGATGA ATACAGATGC GACCGAAACA TGCCACTCGG TGTCAATGTA AGTCTCATTC
ATCCCTCAAT TGATATCTCA ATGGCGTTAA CGCAGACCGT AGCTTGCCTC TTTGACCAAG
ATTCTCAAAT GTGCTAAAGA TACTGATGTT GTCACACTTA AGGCTTCTGA CGATGCCGAT
GCACTCAACC TTATATTTGA ATCTCCTAGT AAGCCATTCC ACGTTTCCAT CAGATCAAGG
GCTAAAACGA CCTGACGCAT AGAGGAGGAT CGTGTTGGCG AGTACGAAAT GAAGCTAATG
GACATCGATC AAGAACACCT TGGCATCCCC GACACTCAAT ACGATGCCAC CGTTTCCATG
TCCTCTGCTG AATTTGCTCG CATCTGCCGC GATCTCGCTG TCCTCGGCGA GTCAGTCAAA
ATCGAATGCT CCAAGGAGGG TGTCACCTTC TCCGCAGACG GTGAAGTTGG GAAGGGTTCT
GTTCTTCTCC GTCAAAATGC TGGTCAGGAC AGAAGCAGAG TCAAGGATGA GAATGAGATG
GATGAGGATG GAAAGTTGGA TATCAAGCCC AAAACAAAAC GGGAAGCCAG ACGGGACCCT
GACGAGGATG ACGAGGACGG CCAGAGGTCC GACGTTGATG TGAAGCCGGA TATTGAGGGC
GGTCAGTTAA AATTTTCTTT ACATATACAC GTGGCTAACC TATCGTGTAG AGGACGAACT
TCAGGACGAA GAAGAGCAAG AAGGAGAGGA GCAGCCCAAG AAGCGAAAGG CGGCTGGCAA
GAAGGACAAG GTGAGCTTAC TGAATGGTAG TCATTTCAGT TTCTGACGCA GACATAGGCC
AATAAGCGAG CCAAGAAGGA GGACGTTGAA GATCCTGGAG TATCTATCAT CCTTGAACGA
CAAGTTTCTC TCACGTTTTC TTTAAAATAC CTCACCAACT TTGCCAAATC CGCTCCTCTT
GCCAGAGAAG TCACTTTGCA TATGAGTAAC GATGTGCCTC TTCTGGTGCA GTTTGAGTTT
GAACAGGGAA CATTGCAATT CTTTTTGGCG CCGAAGGTGA GTGATCACTT AACTGACCCA
GCAAAGACTA ACGGGAAGTT AGATTGCGGA CGAATAAGGT TGATTGTAAT AGTCCCTCTT
GGTATAAACA TTGTGTACAG ATTTCAATCC CTCATGCAAA CAAATAAGAT ATCTC
|
|---|
| Protein sequence | MLEARVKQAV VLKKLLDAIK ELVSDGNLDC TEEGISLQAM DNSHIALVAL KLEASEFDEY
RCDRNMPLGV NLASLTKILK CAKDTDVVTL KASDDADALN LIFESPKEDR VGEYEMKLMD
IDQEHLGIPD TQYDATVSMS SAEFARICRD LAVLGESVKI ECSKEGVTFS ADGEVGKGSV
LLRQNAGQDR SRVKDENEMD EDGKLDIKPK TKREARRDPD EDDEDGQRSD VDVKPDIEGE
DELQDEEEQE GEEQPKKRKA AGKKDKANKR AKKEDVEDPG VSIILERQVS LTFSLKYLTN
FAKSAPLARE VTLHMSNDVP LLVQFEFEQG TLQFFLAPKI ADE
|
|---|
| |