Gene CNL06550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL06550 
Symbol 
ID3254993 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand- 
Start bp824093 
End bp825090 
Gene Length998 bp 
Protein Length269 aa 
Translation table 
GC content58% 
IMG OID638254130 
Productorotidine-5'-phosphate decarboxylase, putative 
Protein accessionXP_568176 
Protein GI58261532 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.115741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCACC CGACCACGCT CAAGACGTAC GCCTCTCGCA TTCCCTTGCA CACCAACCCG 
ACCGCGCGGC GGATCCTGAG CATCATGGAC CGCAAACGCA CGAACCTGTG TGTGAGCGTG 
GACGTGACCA AGGCGGCCGA GGTTCTGGAG GTTGTCAGAA GGGTCGGCGC GAGTGTCTGT 
ATGGTCAAGG TGCGTTATTA CACGGGCGCG GGAGGGGCGG GGGGGTCAAA GAGAAGAAAC 
AGTGGGTGAG GGACTAGGTT TTTGGCTGAC TGTTTTGTCT GCGTGGTTGG GTATTTATCC 
AGACGCACTG CGATATTATT GAAGACTTTA CTCTCGAGTT TGCAGATGAG CTTGTCAAGC 
TTTCAAAGCA GCTTGATTTT GTGATTTTCG AAGATCGCAA GTTTGCGGAT ATCGGTGAGA 
TTTTTTTATT TTCCAACTGT CGTCGTCGTC ACTTGGGTAC ATGGAAGCTA ATACATCTCC 
TAACAAAAGG CAACACGGTC TCCCTGCAGT ACTCTTCCGG GACGCACAAG ATTGCTTCGT 
GGTCAGACTT GACCAATGCG CATTCCGTCC CCGGCCCTGG TATCATCACC GGCCTCGCGT 
CTATCGGTCT CCCCCTCGGA CGTGCGCTTT TGCTGCTCGC CAACATGTCT TCCAAAGGCG 
CGCTCGCGAC TGGGGAGTAC ACGAAACAGA CGATGCGAAT GGCGCGCGAA GCCGGGCGGG 
AGTTTGTCGT CGGGTTTATC GCGCAAGAGC GGGTAGACGC GGGAGAAGAC GGGGACTGGC 
TGATCATGTC CCCCGGGGTG GGGCTGGCCG CCAAGGGGGA TAAGCTGGGG CAGCAGTACA 
GGACGCCGAA AGAGGTGGTG CGCGATGCCG GGGCGGACGT GATTATCGTC GGACGAGGGA 
TCTATGGGGT GCAGGGCGGG GAAGAGGCGG TCAAGGCGGA GGCGGAGAGG TACAGGGAGG 
AAGGGTGGAA GGCGTACGAG GAGAGGCTGA GTAGATAG
 
Protein sequence
MPHPTTLKTY ASRIPLHTNP TARRILSIMD RKRTNLCVSV DVTKAAEVLE VVRRVGASVC 
MVKTHCDIIE DFTLEFADEL VKLSKQLDFV IFEDRKFADI GNTVSLQYSS GTHKIASWSD 
LTNAHSVPGP GIITGLASIG LPLGRALLLL ANMSSKGALA TGEYTKQTMR MAREAGREFV 
VGFIAQERVD AGEDGDWLIM SPGVGLAAKG DKLGQQYRTP KEVVRDAGAD VIIVGRGIYG 
VQGGEEAVKA EAERYREEGW KAYEERLSR