Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL05040 |
Symbol | |
ID | 3254725 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | + |
Start bp | 414126 |
End bp | 416708 |
Gene Length | 2583 bp |
Protein Length | 556 aa |
Translation table | |
GC content | 46% |
IMG OID | 638253976 |
Product | beta DNA polymerase, putative |
Protein accession | XP_568043 |
Protein GI | 58261266 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1796] DNA polymerase IV (family X) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TCGACCATTG TTATAATATC CCGTGTCTGT ACCACTTTCC GCTTTGGTTT GCTCACCACC TTAATGCCCT CCCGGCCTCC TGTCCATCCC TACACTTCCA GTTCGACTTC AACTGGGGTG CATGGCCATC ACAACGCCGC CCCACATCAA CTGTATAAGC TCTTTGCAAA TTTGACCTTT CATATTGTAC CGGCCAAGCT TGAAGATGAC CTTGCCCGAA TTTATGAATG TATCGATGAG TTGGGGGGAA AATGTGTGGG GCCGGAGGAT GCCTGGGTTA TAGTCACTGC TTTAAAAGGG AGGCAAAGAC TGTCGAGGTC TCTGGACCAA AAATGGATGG TAAGCTCTCG CTAATGAATG GTAATACCAG TCTTCTTACA CAATATCCGC AGGAGACCAA GCAAATTGTC TACGTCAGCT ATATCTTCGA CACCTACCAG GCATGCTTGG AACACGCTGT TTCTCCAAAA ACGTCGACTC CCAAACTCCC TCTACGAAAA AATTATCTAC ACGTCCTTTC GAAAGAACAG TCTCCTATTA AGATTTCCTG TAGACTGGAC CCTGGGGACC CAAGTATCTC ACAGCCTTCT ACCAAAAGAA GGAAAGTAAA CGACGGTTAT GTGACAGCTT ATAGGGACGA TATGACTCTC TTGAAAGAGG ATGTGCCTCT CGAAGGCATC CCGGCCTCTT GCGCTCAAAG ACCATGTCCT CTGGTATGCA TCAATCAAGA TATCGTATGT CCAGGTCAAG GACAGCCACG AATCACGCTG ACATTGACGG ATTTTAGGTG GACGCTATCA AGCCAATCTT TGAAGAGCGA GAGTTTGAAG AGGCACAGCA GAAAAACTCG AATGTTTTGA GCTACCGCCG AAGTCTAAGT GTGAGTCTTT CTTACAGCCC CGGGGGCGGT CATGGCGCTT ACTGAAGATC GATGATAGAT GCTCAAATGC GAGTCTAATT GTCATCAGAC AAAATCCAGT ATAATGACCC CGTGTACATA GCTGTGCCGA GACGAATCAC ATCAGGCAAG GAAGCGCTGA GTCTTCAAGG TGTGGGTGAG AAGGTGGCTA CCAGAGTGAG CAACAACTTT ATCACCCATC TGTGATTTTC TGTAGGTTCT CAGCTGAAAT GGTGTTAGAT CGACGAGTTC TTGCAGACAG GTGAAATAGC CGAATCGCAA GAGATTTTGG CATCATCTCG GTTCAATGCG CTCCAGAATT TTGCCTCCGT GTATACTATC GGTCATTTTC GGGCCAAAGA ACTATATGAG CGACATCACT GCCGGACGCT GGACGACGTT AAACGGCATT TTGCTGATAT GGAGAAAGAT GGAGAAGCCA AGCAGGGGAG AGGGAAAGAC AAAAGAAGGA TGCGAGGTGG TATGAAGGAA CATGAGATAG TAGAGGAGTG GATGAAGTTG AAAAATGAGC TAGATCAGAA GTAAGTATAG CCTTGTGCAG AAAGGAAGGA AAGGATTGAA GTTAAATTGG AACAGAATTC CAAGGAAAGA GGTTGAGGAA ATTGCTGCGT GCGTGCTGGA CAATCTTGAG GCATTCATAC CCGGTTGTGA ATATACCATC TGTGGAGGGT TAGTTGCCTC TGTAGCCAGA AAGGAATGTA AATGGGAGCT TATTTGAAAG TAGTTATCGA CGGGGCAAGG CCCAGTCAAG CGATGTTGAT ATTGTATTTC GCCCACCGAA AGATGATCAG GACATAGGGC TCCTACGAGC ACTCTACCTT CGTCTTTCAG AGCTTGGTAT CGTCACTCAT GTCCTTCGTG AGTTACTTCT TCTATCCACT CTAACGATGA AGCCTGTGAG GTGACAGTCT CCCAGAGGTT ACGCATCGTG ATTCCAACCA GCCAATTCGT GCCGCTGCAC AAAACTTTGA CAATCTAGAC AAGGCTTTCG TCATTTTCAA ACTGCCTGGT GAAGGAAGAC TGCATAGAAG AGTGGATTTG ATCAGTGCCC CGAGAGATCG GTATGCTAGT GCTGTATTGA GCTGGACAGG GAGTATGATG TTTGAAAGGG ATCTTAAGTG AGTACACTGC GTTTTCTCGC CTATCAATTG AAAACGACAA CTAGCAACAG ATGCTTATAG CTATCTGCAG AAGATATGCC GAGAATGAGT GAGCTAGATA GTTTATTTCG AACTCATATC CGACGACAGC TGATAGCAAA TGGACTGTAG AAAGGGTCAC AAATTCCGAG CAGGTCTCAT TAAGATTGCC ACAGGGGAAG AGATTAATTT GGAAACAGAA AGAGAAATTT TTGATTATCT TGGTCTGAGA TATATCCCTC CTGAGCTGAG GAACGCCGAC GGATAACCAA GTTGCTGCGT GGGAAAGAGG TGTGCCTCGA CAATCTTGGT GGTCATCATC TACTGCATCA TCCATCATCT TTGCCGCCAT GGACTCATTC GTCTATTTCT TGCTGAATCC TAAAACGTTG TTTACTGTTG CAGCATGTTC TTTTCCTCGA TTTATACCAA TGAATTGGTG AAGCTCATTT TTGAGTTTCG GAGGAATATG GCAAATCTGG GTACACGACT TCATTCCCCA ATTTGCTCGT TCGGGCAAAT ACC
|
Protein sequence | MPSRPPVHPY TSSSTSTGVH GHHNAAPHQL YKLFANLTFH IVPAKLEDDL ARIYECIDEL GGKCVGPEDA WVIVTALKGR QRLSRSLDQK WMETKQIVYV SYIFDTYQAC LEHAVSPKTS TPKLPLRKNY LHVLSKEQSP IKISCRLDPG DPSISQPSTK RRKVNDGYVT AYRDDMTLLK EDVPLEGIPA SCAQRPCPLV CINQDIVDAI KPIFEEREFE EAQQKNSNVL SYRRSLSMLK SVPRRITSGK EALSLQGVGE KVATRIDEFL QTGEIAESQE ILASSRFNAL QNFASVYTIG HFRAKELYER HHCRTLDDVK RHFADMEKDG EAKQGRGKDK RRMRGGMKEH EIVEEWMKLK NELDQKKEVE EIAACVLDNL EAFIPGCEYT ICGGYRRGKA QSSDVDIVFR PPKDDQDIGL LRALYLRLSE LGIVTHVLQV THRDSNQPIR AAAQNFDNLD KAFVIFKLPG EGRLHRRVDL ISAPRDRYAS AVLSWTGSMM FERDLKRYAE NEKGHKFRAG LIKIATGEEI NLETEREIFD YLGLRYIPPE LRNADG
|
| |