Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK03090 |
Symbol | |
ID | 3254377 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | - |
Start bp | 910105 |
End bp | 913883 |
Gene Length | 3779 bp |
Protein Length | 926 aa |
Translation table | |
GC content | 47% |
IMG OID | 638253800 |
Product | helicase, putative |
Protein accession | XP_567902 |
Protein GI | 58260984 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGTGAATCGC GTCGGCGGCA AGAATTGTCA TCTTTATCTA CGTAATAAAG GAAAGAGATC ATCCATCTCT CTCTAAACTC GACCTGTGGA TCGCTGCACA GGTGAATATT TTACCCATGT CTACTGTGAC ACCATCACTC GCCAATTCTA CCGCCGCCAC TTCTCCAATG TCCCAATCTC CGTCAACACG AAGCGCGTCA CCCTCAAAGG AGGAGGTCAA AATCGTTTCT AGCAGCGAAC GCGATGCCGC TGCTGACGGC GCGGATGTTG ACGGTCAGGA AGGGATAGCA GACCCTAAAA AGGTGGTTGA AGAATTGAAA GAAGAAGGAC AACATGATCC AGAGGTAAGT GCACATCAAC GAGACACAAA TCAATGTACT TGTGTAGCGT GTTTATTTGG TTCGAGAGTT GATTGTTCGA AACTAACGCC AAACGTTCCT TTGTCTCTCT CGATGCTCTT ATATTGCGAC TTCTTGCTCT GTCTTTGTTG AATTCCATAT CAATTTCCTC CAACTACTCT CCAACTACTC CGTATTATAA TGCTCTATAC ACCAATCGTC CATGATGACA TTGACTGCAC TCAACAGGCT GCAGCTCGAG CTGCTCGTCT GAATTTCTTA CTTGACAAGT CTACGATCTA CGCAAAGATC ATTGGCGATC GTATGGCCCG TCAGCAGATC GAGAAGCGAA AAGCCGAAGC TCGAGCAGAA ATTAGGAAAG CCAACAAGGA AAAGAAGGAG GCAGAAGCAA AGGAGATTAG GAGAGAAGGC GTGGGGGATA AAAGAAAGCC TAAGCGAGCG GAGATCGAAA GCAAGGATGA AGGTCGAGGC AAGAGAAAGA GGCAGAATAT TGGTGGACGA GATGAGAAGA AGGCTAAAGT GGACAAGGAT GAGGTGAATA TCTTGATCAG ATGCTTGTAA TGTAGGCTGA CTTGATCTTT CAGGTGGATG TTGACGAGCG ACCACCTGAG CAGGTTTCAG AACAGACTCA AAGTGTCCAC GCTGAACAAG ATGGCGAGGA GGAAGACGAT GGAGACGTTC AATACTCCTT CAAGCAGCCC GAACTCGTTA CTGGTGCCAA ACTCAGAGAT TACCAGCTTG CAGGCGTCCA GTGGATGATC AGTCTGTACG AGAATGGCCT CAACGGTATT CTCGCTGATG AAATGGGTCT CGGCAAGGTG AGTCAAAAGG TTCAATCGGT CACTCATTGT GCTTACAAGC TGGACAGACT CTGCAAACAA TTTCCTTCCT TTCCCATTTG CGAAGTAAAG GCACTTGGGG CCCATTCTTG ATTGTCTGCC CTCTTTCCGT CTTGAATAAC TGGATCATGG AATTTGAAAA GTTCACACCT AGTGTCCCTG TATGTTACAT ATTCCATCTA TCATCACCAA TGCTGACTTG AGGCAAGGTC CTTATGTACC ACGGTAATCC CGATCATCGC GCTGAACTTC GCGCAACTCG TCTACAAACT CCTACTGCGT CTGATGCTGG CTCAAGTAAG ACTAAGGGGC GTAAATCTAA TAGCAATCTG GCCGGTAACA ATACTTCAAC TTTCCCTATC GTTATAACGA CGTATGAGAT GTGTATGAAG GATAAACAGT TTTTGAGCGG TATCAAGTGG AAGTTCATTG TCGTCGACGA AGGCCATAGA TTGAAGAACC TGGATTGCAA GTATGTGTTA CGTAGTATAT TCTGACGAAG GTGCTGACCC GAAGCTTAGG CTTATTCGCG AGCTTAAGTC ATATACCAGT GCCAATCGAA TGATCCTTAC AGGTACTCCT CTCCATGTTC GTCTCTCAGT TTGGATCTTA CCTGTGCTAG TCACTGATTG CGGATGTAGA ACAATCTCGC AGAGCTTTGG TCTCTTCTCA ACTTCATCCT TCCCGATATC TTTGACGATC TAGACTCATT CCAGCAATGG TTCAATTTTG ACGAGATGAA TGAGGGACAA ACGACTGAAG GCTTGCTCAA CAAATCTAAT GTCGTGGCAT CTTTACATGC CATCTTGAAA CCATTCTTGC TTCGACGCCT CAAGGTCGAC GTCGAGAAAG AGCTTCCCCC CAAAAAGGAA TACCTCCTTT ACGCCCCTCT TACTCAGATG CAAAAGGATA TTTACCAGGC TATCGTCTCT GGCCAGATCC GGGAGTACCT TATCGACAAA GTTTCCTCCA GTGGATCAGG TTCAAATACT CCCAAAGAGG AGACCCCCGA GCTCGAAGCA GCAGTTGAAG CGACCGATGG TAGAGGGCAG AGAAAGAAGA AGAAAGTCAA CTATAAGATT GAAGAGAATG ATAACAAGTA TGTCAGGGAT TTAGAGGAGG GCAGGATAAG GCCCGAGGAT GGCCCGACCG GGCTGGAAGA AAAGAGTGCT GCCGAGGTGG GAAGAGAGTG GGCGTTGAAG CAAGCGAGTG AGTATACATC AGAGACATCC ATTTTGACCG GCTTCTGATC AGAATGGCAG CCAAGCACGT CAACAACATG CGCCTACAAA ATCTCGTCAT GCAGCTCCGA AAGATCTCTT CCCATCCTTA CCTCTTCGAT TGGCCGAGCG ACCCTGCCAC GGGTGAACTA GTTGTCGATG ATAACTTGGT CAATGCAAGT GGAAAGATGC TGCTGTTAAA CAGGTTGCTC GATGCCTTAT TCCAGAAAGG TCATCGCGTA CTGTTGTTTA GTCAATTCAC TACCATGTTG GACGTTATCG TAAGTATCTT GAAGGTTGAC TATGTCTTTC CACAGCTGAG GATTTTTTGC AGGAGGACTG GGCTACGGTT TACAAGGGCT GGAAGGTTTG TCGAATTGAT GGGTCAACAC CTCAGGAGTC TCGTCGAGAA CAGATGGACG AATTTAATGG TGGTAAAGAC GATCCAAACG CCTGCAAGCT CTTTCTACTA AGCACAAGAG CCGGTGGTCT TGGTATTAAC CTTGTCAGCG CCGATACTGT CATCTTCTTT GATCAAGACT GGAGTGAGTA TTCATCTTAT CCAAAGTCTG CGCAGGATTC ACCCGCTCAT GGGCTAATGT CACGATTTTT GCAGACCCTC AAATGGACTT GCAGGCTCAA GATCGTGCTC ATCGTATTGG TCAAACCAAA CCTGTTCTCG TTTTCCGACT CGTTTCCGCC CATACTATCG AAAGCAAAAT TCTGGCCAAG GCTGGTAACA AGCGAAAGCT CGAGGCGCTT GTCATATCGC AAGGAAAATT TGGTCGAGTG GTAGATGAGA ATGGAAGGGT GCTGTTAGGT AGAAAAAGTA CCAAGAAGGC TGAGGCGAAG GAGAGTGTCA CGGAAATGGC CAAGGCGTTG TTAGATTTAG AAGGCGAAGA GATTAATGTC GCGAGCAAGG ACGATCAAAT CATCAGGTAT GTCCCTCCTC ATGGTTCTCA TATCCGCCGT AATCGTGCTA TTCATTTGGA ATGGACGCTA ACAACGGTTA TTTTTCGACA ATAAAACTAG TGATGCTGAC CTTGAAATCC TCCTCGATCG ATCCCCCGCC GCATTCGCAC GTCAAAAGGG TTGGTCCGCC GGATTGAGCA AAGCTGGTGC CCATGGCCGA GCAGAACAGC TCAAGAAGGG TGAAAAGACG ACCTTTGAGG TGTTTGAGAC TGCCAAGGAT GACGGGCAGG GGTTGTCTGG GATGTTTGGG GGAGATGGTG ATGCTGAATA GACGGGGAAA GAGGAAAAAG ATTGTAGACC GAAAGAGACG GATGGTTTGG TTTGATACCT CAAAAGATCA TTTACGTACG CGATGTTAGA GTTGGAGATA CGCGGCTGTT GATCGGCGA
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Protein sequence | MSTVTPSLAN STAATSPMSQ SPSTRSASPS KEEVKIVSSS ERDAAADGAD VDGQEGIADP KKVVEELKEE GQHDPEAAAR AARLNFLLDK STIYAKIIGD RMARQQIEKR KAEARAEIRK ANKEKKEAEA KEIRREGVGD KRKPKRAEIE SKDEGRGKRK RQNIGGRDEK KAKVDKDEVD VDERPPEQVS EQTQSVHAEQ DGEEEDDGDV QYSFKQPELV TGAKLRDYQL AGVQWMISLY ENGLNGILAD EMGLGKTLQT ISFLSHLRSK GTWGPFLIVC PLSVLNNWIM EFEKFTPSVP VLMYHGNPDH RAELRATRLQ TPTASDAGSS KTKGRKSNSN LAGNNTSTFP IVITTYEMCM KDKQFLSGIK WKFIVVDEGH RLKNLDCKLI RELKSYTSAN RMILTGTPLH NNLAELWSLL NFILPDIFDD LDSFQQWFNF DEMNEGQTTE GLLNKSNVVA SLHAILKPFL LRRLKVDVEK ELPPKKEYLL YAPLTQMQKD IYQAIVSGQI REYLIDKVSS SGSGSNTPKE ETPELEAAVE ATDGRGQRKK KKVNYKIEEN DNKYVRDLEE GRIRPEDGPT GLEEKSAAEV GREWALKQAT KHVNNMRLQN LVMQLRKISS HPYLFDWPSD PATGELVVDD NLVNASGKML LLNRLLDALF QKGHRVLLFS QFTTMLDVIE DWATVYKGWK VCRIDGSTPQ ESRREQMDEF NGGKDDPNAC KLFLLSTRAG GLGINLVSAD TVIFFDQDWN PQMDLQAQDR AHRIGQTKPV LVFRLVSAHT IESKILAKAG NKRKLEALVI SQGKFGRVVD ENGRVLLGRK STKKAEAKES VTEMAKALLD LEGEEINVAS KDDQIISDAD LEILLDRSPA AFARQKGWSA GLSKAGAHGR AEQLKKGEKT TFEVFETAKD DGQGLSGMFG GDGDAE
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