Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00950 |
Symbol | |
ID | 3254413 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | + |
Start bp | 297631 |
End bp | 299743 |
Gene Length | 2113 bp |
Protein Length | 557 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253585 |
Product | Pol II transcription elongation factor, putative |
Protein accession | XP_567783 |
Protein GI | 58260746 |
COG category | [B] Chromatin structure and dynamics [K] Transcription |
COG ID | [COG1243] Histone acetyltransferase |
TIGRFAM ID | [TIGR01211] histone acetyltransferase, ELP3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.110026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCAC CCACAACCTC ACAGTCGGAA CTGCACCTTC TATGTGTATC CGCCGTGGTC AGAGACCTCA TCTCAACCTA TAATTCCTCA AGCAGCTCCG CCACCCAGCC TCCAAACGTA AACAGTCTTC GAGCAAAATA CGCAAAAAAA TACGGACTCA AGGCAGTCCC TCGTTTGACA GATGTCCTCG CTGCTGTCCC TGAAGAATGG AAGGACAGGC TGAGGGGATG GCTGAGAGCA AAGCCAGTCA GGACGGCGAG CGGTGTGGCA GTTGTTGCTG TCATGTGCAA ACCCCATCGA TGTCCTCACG TAGCCATGAC CGGAAACATC TGCGTGTAAG TGTTTCTAGT GGCACTGATC TGTGATCGCT ACTTATAGAA TACGATAGCT ACTGCCCCGG CGGTCCCGAC TCTGACTTTG AATACTCAAC CCAGTCATAC ACTGGATATG AGGTACGTAC ATTCTGCTAC CCGCTTTGTG TGCCTCGTCT GACATTCTGA AGCCTACTTC TATGCGAGCC ATCCGGGCCA GATATGACCC ATATGAGCAA GCGCGTGGAC GTGTGAACCA GCTCCGTGAC CTTGGACACA GCGTCGACAA GGTTGAGATC ATGTACGTAG CTTTTCTTTT TCTTTTTTGG TTTTCAAAAG TTTTTCCGCT CACTGGATCA CAGTATCATG GGAGGAACGT TCATGTCCAT GCCGGAAGAC TACCGCCATA AATTCATTGC TGGACTTCAC AATGCCTTGA GTGGTCACAC TGGAGAGGAC GTTGACGAGG CTGTCAAGTA AGTCTATTTG CCAACTCAGC AAAAAGTTCG AGTAAACTAA TATACCACAG ATTCTCTGAG CAAAGCAAGG TCAAATGCGT TGGTATCACT ATTGAAACTC GTCCCGATTA CTGCTTGAAG CCTCATCTGA GTCAGATGTT GAGGTATGGA TGCACCCGTC TGGAAATCGG TGTTCAATCA GTCTATGAAG TGAGCCAACT CCATTTTTAC TCACCCCCTC CCCCCTCTCC CCACCAAAAA AAAAATCCAG CTGACACCCA GTCAAGGACG TGGCACGAGA CACCAACCGA GGACACACTG TCCGAGCTGT CAGTGAATCC TTCCACATGT CCAAAGACGC CGGCTACAAG ATTGTCGCCC ACATGATGCC TGACCTCCCC AACTGCGGTA CCGAGCGAGA CATTTGGCAA TTCCAAGAAT TCTTTGAAAA CCCCGCTTTC CGCTCAGACG GTCTCAAACT GTACCCAACC TTGGTCATCC GTGGTACCGG TCTTTACGAA CTGTGGAGGA CTGGCAAGTA CAAGAATTAC CCTCCCAACG CCCTTGTCGA TATCGTAGCG AGGATCATGG CGCTCGTACC CCCCTGGACG CGAGTCTACC GCGTCCAACG AGATATCCCG ATGCCGCTCG TCTCTTCCGG CGTGGAGAAT GGTAATTTAC GTGAACTCGC ACTTGCGCGT ATGAAGGATT TCGGTGCCGA GTGTCGAGAT GTGCGATACC GTGAGGTCGG TCTGCACGAG ATTCACCACC GTGTGCGACC GCGTGATATC GAGCTTATCC GAAGAGATTA CGCGGCGAAT GGCGGATGGG AGACGTTCTT GTCGTATGAG GATCCTCAGT CTGATATCTT GGTCGGTCTT TTGAGGTTGA GAAAGTGTTC AGAGGAAGGG ACGTTTAGGA AGGAGTTGGT TGGTATGCAA GGTGGATGCA GCCTTGTGCG AGAGCTGGTA GGTTTTTTTT ATTTTTTTAA TGGGGTTGAA GTATGGATAC TGATCCAAGG TTGATTAGCA CGTGTATGGT ACTGCTGCAC CCGTTCACTC TCGTGACCCC AAGAAATTCC AGCATCAAGG TATCGGTACA TTGTTGATGG AAGAGGCGGA GCGTATCGCC CGTGAGGAGC ACGGTAGCGG TCGGATCGCT GTAATCTCTG GTACGTATAC GAGCCAAACA GCTTTGCCGA ACAAGGATTT TATTGATAAT CATGTACACA CAGGTGTTGG AACGCGTGAT TACTATCGAC GGCTTGGTTA CTTTCTCGAT GGGCCTTATA TGGTCAAGGA TCTTTTGTAC GATGACGAGT AGATTTGAGC TTGTGATTTT TGA
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Protein sequence | MIAPTTSQSE LHLLCVSAVV RDLISTYNSS SSSATQPPNV NSLRAKYAKK YGLKAVPRLT DVLAAVPEEW KDRLRGWLRA KPVRTASGVA VVAVMCKPHR CPHVAMTGNI CVYCPGGPDS DFEYSTQSYT GYEPTSMRAI RARYDPYEQA RGRVNQLRDL GHSVDKVEII IMGGTFMSMP EDYRHKFIAG LHNALSGHTG EDVDEAVKFS EQSKVKCVGI TIETRPDYCL KPHLSQMLRY GCTRLEIGVQ SVYEDVARDT NRGHTVRAVS ESFHMSKDAG YKIVAHMMPD LPNCGTERDI WQFQEFFENP AFRSDGLKLY PTLVIRGTGL YELWRTGKYK NYPPNALVDI VARIMALVPP WTRVYRVQRD IPMPLVSSGV ENGNLRELAL ARMKDFGAEC RDVRYREVGL HEIHHRVRPR DIELIRRDYA ANGGWETFLS YEDPQSDILV GLLRLRKCSE EGTFRKELVG MQGGCSLVRE LHVYGTAAPV HSRDPKKFQH QGIGTLLMEE AERIAREEHG SGRIAVISGV GTRDYYRRLG YFLDGPYMVK DLLYDDE
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