Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ03090 |
Symbol | |
ID | 3254194 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | - |
Start bp | 954272 |
End bp | 960233 |
Gene Length | 5962 bp |
Protein Length | 1593 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253457 |
Product | Glycogen debranching enzyme, putative |
Protein accession | XP_567389 |
Protein GI | 58259958 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | [TIGR01531] glycogen debranching enzymye |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGGGGATAAG AGCATCTCTT CCTCAGACAT CTCCTTCTCT CGACAATTCC CCATCCCCAG TGTCCCTTTC ATCGGACACT CCTTCCTTCC ACGCCTTATT CGTTTACCAT CCTTCCAACA ACTCGCTCAT CATCCCACTA TGACTATCCT CGACTCCCTC AAACCAAGCA ACATCGAGAT CCCCAAGCCC AAGGCTGTCC TTCAGGGCGA TGGCAAGAAG ACTCCCAAGA CACCGCAAGA TGAAGCCATT TCATTCTTCT CGAGAGAAGG AGATGGTGAG CCAGTGCAGG TCTGGGAACT GTCGTTGGAG GATGACGGAG GCCCTAGTCC AGAAAAGAGT GTGAGCCTAT ATGTTCGGTG CAGGACATGT GAATGACCTG GCTGACATAC ACACAGTACA TTCGACTTCC GCCTCCCTTC AAGCCGTACG TCTTGAGGTT TACTCTTCAG CCCGGTACGG ATGTCACTCG CAATGGCGTG CTTAAAAGCG ACTTTCCGAT GGACGGGGGC GCGTTTAAGC GGGATGACTG GAAAGAGCGA AAGTTGCCCT CCAACCTGAG CAAGTGAGTG CTTCTGGTGC ATTGTAGCGT TTAAGAGAGC TAATTCAGAT AGACCTATCG AGGTCGACCT TCCGATTTCC GCTCCCGGAG CATTCTGCTA CTTTATCGAG TATGACTCGC CCGATTCCAC CGGTCGAGTT CAAGGCCGAA AAGGCTACTT TAACGTTGAT CCCATCATCA CTCTTCCTGC TCGTACCCCA TTCTTCCCTC CCGATACCCC CATCACATCT GGCCCTCTGA AAGATGAGTC TTCAGGTGCC ATCCTTCCCA AGGACAAGCA GCTCAGTCTT GATGGTCTTA TCATCATCTC TGTTCTTGCT AAATGGATGG GCAAAACTAC AGAATGGGAA CCATTCTTCG CGGAAGCTAG CAGAAGAGGC TACAATATGC TTCATTGGGC GCCTCTTCAA CAAAAAGGCA TGTCTGGCAG TCCCTACTCT ATTCAAAACC AACTGGTCTT TGATATAGAC CTTTTGAAGG ACTCCAAGGC GAAGGATGGT GGGGTAAAGG AGGTTGAAGA AGTGTTGAAG TTTGCAAAGG AAAAGTACGG ATTGGGGGGT GTCACTGACG TGGTGTTAAA TCACACTGCG TATGACTCGC CTTGGTTGCA GGAGCACCCT GAAGCTGGTA AGTCGTCACA AAGGGGAGCG ATCGTTAGCT AAGTCAAATG TAGGTTATTC ACCATACAAC ACTCCTCATC TCGCCCCTGC TCTCGAATTT GAGGATGCTC TGCTTGGCTT GACATCAAGG CTCTCGTCCG TTGGTCTCCC CACCAACCTC AAATCCGAAT CCGACCTCCA GGCGTTAATC CCCCACATCA AATCTTCCAT CGACGACGCC AAATTGTGGG AGTACTACAT CTTTGACGTC CAAGGTTCTG AGCGTGCTGT TGCCGATTCT TTGCTCAATT CCAAGCCTGA AGCGCCCAAG CCTTGGGAGG GATCTTCCCT TCAAGGCAAG TCACTCAATG AACTCGCCGA AATTGTCAAG TCTTCCGATA TCATCACTTC TTATCGCGCT TACTCCTCTC GGTACTGCAC CTCTGTCCCT CCCGCTGTGG CTGCAGGATT TATTCAAGCT GCTTACCCAG GTGATTCGGC AGAGAACCAA GCCAGTCGAT GGGGCAAGAT CTTGGATGTG CTGAATGTGG ACCTTTATAA GGAATGTAAT GAGGATATCC AGGCTGGTAT CGATGGTGTT GTGGGGAGGT TGAGATATAC TAGATTGGAG GAGGGTGGAC CTAAGCTTGG AGAGCTTACC GAAGAGTGAG TTGTATTTCA ACTGCCATAG GCAGTAGTTA ACAAAATCAG GCGGGCGATC CTGGAGCGCT ACTTCACTCG AATCCCCAAG AACGACATTA CCAAGAAACA CCCCGAGAAT GCCCTCGCTG TCGCCAACAA CGGGTGGATG TGGGCTGCTG ATCCTCTAAA CAACTTTGCC GAATACCCTT CTAAAGCCTA CCTCCGCCGT CAGGTCATTG TCTGGGATGA TTGTGTCAAG CTCCGATACG GTTCTCAAGC TTCTGACAAC CCGTGGCTAT GGCAGCACAT GATCTCCTAC GCCGAACTTC TCGCTGGGAT GTTTGATGGT TTCCGTTTGG ACAATTGTCA CTCTACCCCG TTGCCCTTGG GCAAGGCCAT CATCGACGCT GGTCGACGAG TGAACCCGAA TCTCTACGTC ATGGCTGAAC TCTTTACTGG AAGCCAGGAG ATGGACTTGA AGTTTGTCAG GGAGTTGGGT ATCAACAGTC TCGTCAGGGA GGCTTACAAC GGCAACACTG TCAAGAACTT TGCGGATCTC CTCTGGAGAT TTGGTCTTGG GAAGCCTGTG GGTTCTATGG ACGTTGCATG CCTTACATCA TCAGGAGAAG TCCACCTTAG CCTTTCATCG TCAAAGTCCA GCACCCGTCC GGCGCTTGTC ACCCCTCTTC AAGGCTCTGT GCCCCACGCA GTCTTCTATG ACCTTACCCA CGACAACCAG TCCCCTCGAG ACAAGCGAAC TGCTGAAGAT GCCTTGTCTA CAGGTGCTCT TGTGACCTTT TGTGCTGCCG CTTTGGGATC CAACAAAGGT TTTGATGACC TCTACCCCAA GCTACTTGAT CTGGTCACCG ATAACAGAAA GTATGAAGTC ATTAGTAAGG AGAAGGAGAA GTCTAGCGGT ATCGGTAATG TCAAGCGAGT GTTGAACGCC CTTCATGTGG AGATGATGGA GGGTGGTTAC TCTGAAGGCT ACGTGCATGA GGACGGCGAG GTGAGTTTCA TGATCGTCGT GCAAAATAAA AGGCTGATAA GAGTTTCAGT ACCTCATGAT TCACCGAATT CACCCCGTCA CCCACAAGGG ATACATGCTT GTTGCTCATA CGGCTTACCC GGGCTTCAAA GGTCGAGGAT GGGGTTAGTA AAACTCGATG TACAGTAGGG AGATACCACT GACTTTGTGT ACATTAGTCA AACCCATTAG ACTCGGTCGA ACCTCTATCT CATATATCTT CGGTGCCTCT ATCAAGACCC GCTTTGAAGA ATGGGAGGAC GACCCCTCTA CTCATCGTGG CATCCCGTCG ACCCTTACAG AGATTGGCCC CCCTGAGATT ACCAAAGGCA TTGAGAATGG AGAGGAGTAT CAAGAGGTTG TTGTGCCAGA AGATTTCGCT CCCGGAAGCA TCATGGTCTT TGCTACTCAG ATGAGCGTGA GTGAACTTTG TGATATTTAG TCACGCTTGG CGACTGACAG CGTCTGCTTC TATATAGGAT ATTTCTGGTG ATCTGGATGC GTTCTGCAAA GAAGGTGCTA TAGATGCTAT GAGCCAACTG GACTTGGTGG ACCTCAACGT CATCCTCCAC AGGGCTGACG GTGAAGAGCA GGATGCTACC GGTAAAGCTT CCACTACGTA CCTCTCCGTT TTCAGTGTAC TGACCCTTTT TATCAAGGTG GTGATGGTAC TTACACTATC CCCAACTACG GCGCCATTAC TTTCTGCGGT CTTGAAGGCT GGATGCACCC CTTGCGAGAG ATCACTAAGA AGAACGATCT CGGTCATCCT CTCTGTCAAC ACTTGCGAGA AGGTACTTGG GCTTTTGACT ATGTTGTAAA CAGGTTAAAC AAGTGAGTCA TTGCCGCAGC CACCGTGAGA ACTTGCTAAT ATTGATCAAT AGGCAAACCT TTGATCTCCC TCGCCTTGAG GCTCCTGCCA AGTGGTTCGC TTCCCGCTTC GATCAGATCA AGGCTACCGC CCCTTCTTTC ATGCGCCCAA AGTACTTCTC CCTCGTCATC CACGAAGCTT ACAAGGCAGC TCGCCGAGCT GTTGTTGAGC AATGCTCTGA GTTTGTTTCT TCTGGCCATT CGCTCACTCA CAATCTTGCC TTGTGCTCTG TGCAAATGTA TGGCTTGGTG AAGAGTGCCA GCTTGGATCC CGGAAGAGCT GTGCCAAGTC TGGCAGCCGG CTTGCCCCAT TTCGCCGCTG GTTGGGCTAG ATGTTGGGGA CGAGACGTCG TAAGTCGTCC TCTGAACGAA CGTGAGGTTA AGGTCGCTAA TCAATGTCAT AGTTCATCTC TCTTCGAGGT CTTTTCCTTA CTACTGGTAA CTATCCAGCT GCTAGGGCCC ATATATTATC CTTCGGCAGC ACTCTCAAAC ACGGCTTGAT CCCCAACTTG CTCGACTCAA CGCGAAATCC CAGGTATAAC TGTCGCGATG GCCCTTGTTA GTAGCGAGTC AAAAGACATT CCTGCCCCTG CTAATGATCT TGACAGGGTG GTTCATTCAA AATATCCAGG ATTACACCCA TATGGCTCCC AACGGTTTGA CCATCCTCTC TGACAAAGTC AAGCGCCGAT TCCCTGCGGA TGACACCTGG GTTGCTTGGG ATAGCCCCAG AGCGTACGAG TATGAAAGCA GCGTCGCTGA ATTGATCCAA GAGATCTTGC AGAGGCATGC AGAGGGTATT GAATTCAGGG AGTACAATGT AAGTAAAAAC CTGACGTTAT CTGGACTTCA GGCAACTGAC AGTGATTAAT CAGGCTGGGC CCAACCTTGA TATGGACATG CGCGACGAAG GGTTCAACCA GAAGATTTGG GTTGATTGGG AGACTGGAAT CATCTTTGGT GGCAACAGAT ACAACTGTGG TACCTGGATG GACAAGATGG GTTCGTCTGA AAAGGCAGGT AACAAGGGCC TTCCTGCTAC CCCCCGGGAT GGTGCTCCCA TTGAGATCAC CGGTCTACTC AAGAGTGCCC TTACTTGGCT TGATAAGTTG AGCAAAGGTG GCAAATTTCC TTTTAAGGGC GTGAATGCTT CTGGTGAGTG TCTAAATATG CTACGCAGGT CCGGGCTAAC TTTTTTCTCA GTCAAGGGCA AAAAGCGTCT CGTGACGTAC AAAGAATGGT CTGACCTCAT TCAAGCCTCT TTTGAGAAGC ATTACTACGT TCCCAGCGAC CCCGCTGAAG ACGATAAATA CGTTATCAAC AAGGGTTTGG TCAACCGCCG GGGTATCTAC AAGGATGTAT TTGGAACTCC AAAGGATAGG GAGTGGAGTG ACTACCAGGT GTGTATCTTT CAAATCAATT CTTCTTTACC ATACTGATCA TTTATCGTGT GTCAGCTTCG ATGCAACTTC ACGCTTCCGA TGGTTGTCGC TCCTGAGCTT TTCACTCCTT CCAAAGCCAT TGGCGCTTTG AGTATTGCCG ATGCTGTGCT TCGCGCTCCT CTTGGTATGA AGACCCTTGA CCCTTCTGAC AGCCAATATC GAGGCGACTA TGACAACTCG AACGATGGTA CAGATCAAGC CATTGCCAAG GGCTGGAACG TGAGTATAGC TAAGCGAATG ATTGGAACCC AGCTGACGGC GATACTGCAG TATCACCAGG GCCCTGAGTG GGGCTTCCCT CTTGGTTGGT TCCTCATGGC TTACCTCAAG TTCGACCGTC TCGCTGGTGA AGGCAAATCT GTAAGCTTCA CACCTGAATA CCTCTGTGTA TCAGTGCTGA CCCTCTTTTT CTGACAGAAT CCCACCAAGA CTATGCATTA CATCTCCAAT ATCCTTAGGA ATCTCGCCCG CCACATTGAA AGTGACCCAT GGCGAGGCTT GCCGGAGCTA ACCAATAGCA GTGAGTGTCC TCCCAGGTTG TTTTTGGTTT GCCTTTTACG CTGACAACTA CATCAACTAA GATGGAAGCT TCTGCTATGA CTCCTGTAAC ACTCAGGCAT GGAGCGCAAG TACGATTCTC GATGTATTGG AGGAAATGCA CAAGATTGGG AAGAATTAGG TACCGAAAAG TGATTGTAAA AATGCCAAAG ATGCTTAATG ACTTGTGAAG GGAAGTAGGA AGACCAATGA GAAAAGCTTG TTTTCAGAAA TTTCTTAGAT GTATTGCATA TGGACTTTGG AATGAATATC AATCCCCAAT CT
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Protein sequence | MTILDSLKPS NIEIPKPKAV LQGDGKKTPK TPQDEAISFF SREGDGEPVQ VWELSLEDDG GPSPEKSYIR LPPPFKPYVL RFTLQPGTDV TRNGVLKSDF PMDGGAFKRD DWKERKLPSN LSKPIEVDLP ISAPGAFCYF IEYDSPDSTG RVQGRKGYFN VDPIITLPAR TPFFPPDTPI TSGPLKDESS GAILPKDKQL SLDGLIIISV LAKWMGKTTE WEPFFAEASR RGYNMLHWAP LQQKGMSGSP YSIQNQLVFD IDLLKDSKAK DGGVKEVEEV LKFAKEKYGL GGVTDVVLNH TAYDSPWLQE HPEAGYSPYN TPHLAPALEF EDALLGLTSR LSSVGLPTNL KSESDLQALI PHIKSSIDDA KLWEYYIFDV QGSERAVADS LLNSKPEAPK PWEGSSLQGK SLNELAEIVK SSDIITSYRA YSSRYCTSVP PAVAAGFIQA AYPGDSAENQ ASRWGKILDV LNVDLYKECN EDIQAGIDGV VGRLRYTRLE EGGPKLGELT EERAILERYF TRIPKNDITK KHPENALAVA NNGWMWAADP LNNFAEYPSK AYLRRQVIVW DDCVKLRYGS QASDNPWLWQ HMISYAELLA GMFDGFRLDN CHSTPLPLGK AIIDAGRRVN PNLYVMAELF TGSQEMDLKF VRELGINSLV REAYNGNTVK NFADLLWRFG LGKPVGSMDV ACLTSSGEVH LSLSSSKSST RPALVTPLQG SVPHAVFYDL THDNQSPRDK RTAEDALSTG ALVTFCAAAL GSNKGFDDLY PKLLDLVTDN RKYEVISKEK EKSSGIGNVK RVLNALHVEM MEGGYSEGYV HEDGEYLMIH RIHPVTHKGY MLVAHTAYPG FKGRGWVKPI RLGRTSISYI FGASIKTRFE EWEDDPSTHR GIPSTLTEIG PPEITKGIEN GEEYQEVVVP EDFAPGSIMV FATQMSDISG DLDAFCKEGA IDAMSQLDLV DLNVILHRAD GEEQDATGGD GTYTIPNYGA ITFCGLEGWM HPLREITKKN DLGHPLCQHL REGTWAFDYV VNRLNKQTFD LPRLEAPAKW FASRFDQIKA TAPSFMRPKY FSLVIHEAYK AARRAVVEQC SEFVSSGHSL THNLALCSVQ MYGLVKSASL DPGRAVPSLA AGLPHFAAGW ARCWGRDVFI SLRGLFLTTG NYPAARAHIL SFGSTLKHGL IPNLLDSTRN PRYNCRDGPW WFIQNIQDYT HMAPNGLTIL SDKVKRRFPA DDTWVAWDSP RAYEYESSVA ELIQEILQRH AEGIEFREYN AGPNLDMDMR DEGFNQKIWV DWETGIIFGG NRYNCGTWMD KMGSSEKAGN KGLPATPRDG APIEITGLLK SALTWLDKLS KGGKFPFKGV NASVKGKKRL VTYKEWSDLI QASFEKHYYV PSDPAEDDKY VINKGLVNRR GIYKDVFGTP KDREWSDYQL RCNFTLPMVV APELFTPSKA IGALSIADAV LRAPLGMKTL DPSDSQYRGD YDNSNDGTDQ AIAKGWNYHQ GPEWGFPLGW FLMAYLKFDR LAGEGKSNPT KTMHYISNIL RNLARHIESD PWRGLPELTN SNGSFCYDSC NTQAWSASTI LDVLEEMHKI GKN
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