| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00400 |
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| Symbol | |
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| ID | 3254253 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 104471 |
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| End bp | 108218 |
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| Gene Length | 3748 bp |
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| Protein Length | 828 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638253197 |
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| Product | DNA topoisomerase type I, putative |
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| Protein accession | XP_567296 |
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| Protein GI | 58259767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.772015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTCC TGTGCGTCGC TGAGAAGCCA AGTATAGCGA AGAGTATCAC CGAGATACTC
TCCGGAGGAC GGTGGGATAC TGTAAGTCCC TATCTCCATT TCCTTCTCCT TTCGTAAATG
TCAAGAAAGG GGCAGAGACT GATAAATTGG CTTCCCTTTT GGACAGAGGA ACGGAAGACA
CCAATATATA CGCAATTACG ATTTCTTATA CAACCTTGCT CCGCCGCTTG GGAATGGAAG
AGGTGCCAAT TTTACCGTCA CAGCAGTCTT GGGACATTTG ACTTCAAGTG TTAGTCACCA
GTCAATTATT CGATTAAGTA GCTCTGTAAA CGGGGATGTG AAGGGTGTAA TGAAACAAAT
GAGAGAAAAG GAACGCTGAT AGAAGCTTTT TGGGAAGTAG GATTTTGATG ATGATCATCG
GAAATGGGGG TCTTGTGATC CGTTTGCGCT GTTCGATGCA CCAGTCATCA CTTTCGTCGA
CCAAGTACGT CTAATCTCTT GCATTCCCGC GGCAAATGTG ATTAACATGG TACCTTTCTG
GCGTAGAAAT TGAAAACAGT AGAATCAAAC CTCCAAATTG AAGCCCGTAA CGCCGACATA
CTCATGATTT GGACTGATTG TGATAGAGAG GGAGAACATA TCGGATCTGA AGTCGTAGCG
GCGTGTAAGA AAGTAAATAG GAATATCCTT GTCAAAAGAG CGAGGTTTAG TGCCATTATC
CCTGCGTGGG TCTCCTTTCC CAGGATGAAG GCTTGAAACT GATAAGCTAA CGCGGTATTT
GTGATGATAT TAGGCAGATC CACCAAGCAT GTAGACAGGC GAACGACTTG GATATGAGGC
AGGCAGATGC GGTGGCCACG AGGATAAGCT TGGATCTCAA GGTTGGATCG GCGTTCACAA
GGCTTACAAC GATGACTTTG CAAGTACGAG TGCCCGATCT AGCAGAGCAA CTCATCAGTT
ACGGTAAGTC CTTCCTTCTC GCATCCCCGG TTTTTTTCCA AGAAGACCAC ACTGGCTGAC
CCAAGACCGC CTTCCTTCCA TTATATCCTC TTTCAGGTCC ATGCCAATTC CCAACTCTCG
GCTTTGTCGT CGAACAATAC ACCCGCGTCC AAGCCTTTGT TCCTGAAACG TTCTGGTACA
TCTTCGTCGC CCTCGAGCGA GAGCATGAAG ATGGTGAACC CAGCACTGTC GAGTTTAGGT
GGAAGAGGAA CCATCTGTTC GATTTAGATC TGGCGGCGGT GTTGTACGAA CAGTGTACAG
TCAATCCGCA GACGAGGGTT TTGAAGGTCG AATCAAAGCC CGCGACCAAG TGGTGGGTTC
CCATGGTTTA TAATGAGGGA GGGTCAGTAC TAAAAGCTAA GAATAGGAAG CCATTACCGT
TGACGACAGT TGAGCTTCAA CAATCTGGTT CGAGGTTACT TCATATGACT CCTAAACGAA
TTCTCGATGT AAACTATATC ATTACCAACA TCACTTGCAT AAGCTGATGG TGTTTGTAGC
TTGCCGAAAA ACTCTATCAA AAAGGTATTG TTAGTTATCC TCGTACCGAA ACCGATCAGT
ACGATCCCAA ATTTGACTTC AACTCTCTCA TCCAAAAGCA AACGCTTGAT AACCAATGGG
GAGCTTACGC TCAAAAGTCA GTCATTTTCT TCTCACCCAG AGCCGAATTT TTACTAATTT
ATAAATGCTA AAAAAATGAA GGCTACTAGA CGGTGCCTTT CAGAAACCCC GAAATGGCCG
TAAAAACGAT AAAGCCCATC CCCCTATCCA CCCTACCGCA CACGCGGGCA ACCTTGAAGG
CGACGAACGC CGCGTATTCG AACTCATCAC CCGTCGTTTT CTCGCTTCTT GCTCGACCAA
CGCCGAAGGC CAAAATACCA CTGTCGAAAT CTCCATCGCC GATGAGATCT TCTCCACTAC
AGGGCTTGTC GTCCTGAGGA GGAATTATTT GGAGGTGTAC CCGTATGACA AGTGGGCGAC
GCATGCGTTA CCGAATTTTG AGGAAGGGGA GGTTTTTATA CCGGATGTAA TTGATTTGAA
GGAGGGAACG ACGAGTCGAC CAAGTTTGTT GACTGAGGCT GATCTGGTTG GGTTGATGGA
TAAGAATGGC ATCGGTGAGT TTGTTTGTCA TGTTCGCTTG CCATCTCTCC ACCTTGGTCA
GTTATTGACC GAGACATGTA ACAGGTACCG ATGCAACCAT CGCTGAGCAT ATTGCCAAAA
TCATTGAACG CGGGTATGTT ACAGAAAAAC AAGAAGCTCG AATAAAATAC CTCGTGCCAT
CTACTCTGGG TATCGGTCTG GTCGAAGGGT TCAATGCTAT CGGTTTTGAC CGTTCTTTGA
GCAAACCACA TTTACGACGA GAGGTGAGCC TTTTTTTATC ATCACTTACA CGTCGAACAT
CAAGCTGATC GATGAATGTA AAAGACTGAG CATCGAATGC AATTGATATG TGATGGTGTA
CGAGGGAAAA GAGAGATTCT CCAGACTACG ATTGAAGAAT ACAAGGAAGT TTTCGTCAAG
GCCCGTCGAG AGTTCCAGAC CGTTATCGAT GTCAGTTTTC CCGCCTTCTT CCCAACGAAA
ATGCAAAACT AACGTGTGTT TTTCTTATAA TCAGTGCGTG GAAAACTACC TTCACGGAGC
TGGCGAAGCC CAAGAAGCTC TTCGAGCAGC AGCACGGGGT GGTCGAGGCG GACGAGGAAC
TAGAGGAGCG AGAGGTGCAA GAGGGGGGAG AGGAACTGGA GGAAGAGGCA GAGGTGGTGG
AGGAGTTGTC GCTCCCAGAG GCGGTCGAGA TGATGACAAT GACGACGACG ACGATGATGA
TGATGACCAA GGTCCGCCGA GAGGTGGTGT AAGAGAGAGA GCGAGAGGTG CGGCGACGAC
GAGAGGGAGG GGAACAAGTA CTGCCAGAGG ACGAGCGGGA GCTGCTGGAG CTGGGACGGC
TGCTGGTAGA AGGGCAGGAT CGCCTACTTT TGGTAAGTCG CCTTCTTCTC CCCATTGTCA
GAATCTAACT AAGCTTGAAT TGATTGATTT ATTCGGTAGG CGCGGATGAT GGCGGTGGCG
ATACGAAAAT GTGCAACTGC GGTAGAGAAG CTGTCTCTCG CGTTGTTGCC AAGGCGGATT
CGGCGCATAA GGGAAGATCG TTTTGGACAT GTCCTCAGCC TCAAGGAGAA CAATGCGGCT
TCTTCGTCAG TCTACTGCTT GCGTATCACA ATAGGCGGCT ACTGACGTGA GGCGCTTCAA
GGAATGGGGG ACGGATGGAG ATATGGCACG CTCGGCTGGC CCTAGTAAAT CACGAACAGC
CAGTGCTCAA CCGCCGCCAT CCAAAAGACA AAAAACCACG GTAAGTATGT TCCATGCCCC
CTTCGCGTCG AAGGAAAAAG GCACTGATAG TGAGTTTCAG AATCGGAACG ATCCCCCTCC
TTCGAAAGAT GGCGTACCTT CGTGTAAATG TGGCCTTGAT GCGGCTTTCG CCACAGTAAT
CAAAGAAGGT CCAAACAAAG GTCGACAGTT CTGGTAAGTT ATCAAGCTTT ACACGTTTGT
GCCGATGAAT GCTACTTGCT AAAGTGCAAT TCCGTCTTAC TTAGGGCTTG TCCGAACAAC
CCGAAAGCCC GTTGTGGGTT CTTCCAATGG GAAGATGATC CTAATCTCGG CAGTGGTGGT
TCTAATGGAG GTGATACTTA CAACGGAGGA GGAGGAAGGA GTGGAACCTC AGGAGGTTTG
TGCTTCGTGC TTGAAAGGTA CACCCTAA
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| Protein sequence | MRVLCVAEKP SIAKSITEIL SGGRWDTRNG RHQYIRNYDF LYNLAPPLGN GRGANFTVTA
VLGHLTSSDF DDDHRKWGSC DPFALFDAPV ITFVDQKLKT VESNLQIEAR NADILMIWTD
CDREGEHIGS EVVAACKKVN RNILVKRARF SAIIPAQIHQ ACRQANDLDM RQADAVATRI
SLDLKVGSAF TRLTTMTLQV RVPDLAEQLI SYGPCQFPTL GFVVEQYTRV QAFVPETFWY
IFVALEREHE DGEPSTVEFR WKRNHLFDLD LAAVLYEQCT VNPQTRVLKV ESKPATKWKP
LPLTTVELQQ SGSRLLHMTP KRILDLAEKL YQKGIVSYPR TETDQYDPKF DFNSLIQKQT
LDNQWGAYAQ KSKPRNGRKN DKAHPPIHPT AHAGNLEGDE RRVFELITRR FLASCSTNAE
GQNTTVEISI ADEIFSTTGL VVLRRNYLEV YPYDKWATHA LPNFEEGEVF IPDVIDLKEG
TTSRPSLLTE ADLVGLMDKN GIGTDATIAE HIAKIIERGY VTEKQEARIK YLVPSTLGIG
LVEGFNAIGF DRSLSKPHLR RETEHRMQLI CDGVRGKREI LQTTIEEYKE VFVKARREFQ
TVIDCVENYL HGAGEAQEAL RAAARGGRGG RGTRGARGAR GGRGTGGRGR GGGGVVAPRG
GRDDDNDDDD DDDDDQGPPR GGVRERARGA ATTRGRGTST ARGRAGAAGA GTAAGRRAGS
PTFGKNGGRM EIWHARLALV NHEQPVLNRR HPKDKKPRIG TIPLLRKMAY LRVNVALMRL
SPQSKQRSTV LMILISAVVV LMEVILTTEE EEGVEPQEVC ASCLKGTP
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