Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI03280 |
Symbol | |
ID | 3259804 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 887885 |
End bp | 891399 |
Gene Length | 3515 bp |
Protein Length | 881 aa |
Translation table | |
GC content | 48% |
IMG OID | 638258820 |
Product | topoisomerase I |
Protein accession | XP_572925 |
Protein GI | 58271538 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3569] Topoisomerase IB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATCCCTTT GTACACAGTC CCAGCCCACA GTTATTCCTG TACTTTTCAG ACCAACCAGC GCCCTTCTAC TCTCCTCAAA CGCGTACATT CGCTCGCTAT GTCCTTCCCG CCAGTGCAGC CCGCCGACAA TGGCATGGCG GTCGTTGCTC CCAATCTCGA GTCTAACCCT ACCACTGTTG CGTCCCACGC CCCACAAATT GCCGTCAAGG ATGAAAATGA TAGTATGAGC GAGGATGAGC AGCCTTTGGC GAAAAGCAAA GCGAATGGAG CGAGGAAGAG AGTCGAAAAC AGCAGTGACG AGGAAGAGAA ACCTCTCGTG AGTTTGTCGT AACCTGGTTT TTACGCTTCA GGTGTCGAAA ACCAATGTGT CATGTGCGTA AAAGACGTTA TTCGAGACCC ACCGGACTTG TGATGATATC ATCCCATGTC GGTCAACGTT TTGGTGTATC ACTCAACTAT GGCGCTATGG CGGCGGCGAG CAGCTACCCA GAAGAAGGGG TTGTCTATGA TGTGTCCTAT GCTTATGGAC ATTGTACTGA CGAATATTGT AGAGCAAAAA GCCCAGAGCC AATGGTGTCA ACAAGAAAAG GGTCGTCGCC AGCAGTGATG AAGAAAGCGA TGTTTCACCT CCTGCTAAGG TGAGACGCGT TTCGACCCAC GCATTTCCGA CCAGAATGTT GCTGACGCGC CGTTTCGACA TCCAGAGGCC TGTTTCCAAG CAATCCAAAC CTGCCACCCC CGATTCTGAA TCTGATGACG ATCAACCTCT CGCCAAGAAG GCTAACGGAC TGGCCGCATC CAAACGTCAG GCTAAAAAAG CGGAGGAATT ATCAGAAGAA AGCTCGGAGG AAGAAAAGCC TCTTGCGAAG GTTGCCAAGA GGGTATCAGC AAAGAAGATG AAGAGCGAGA CTGAGGACTC TGAGGAAGAC CGGCCTCTTG CAAAGAAGAA GGCTCCTGTT AAGCGTGCTC CAGCAAAGAA ATCGGCGAAG AAGGAACCTA GTGAGAGTGA AGAGGATGAG AAGCCTTTAG CGAAGAACGC TAGAGGGAAG GCCAAGGCGG CGACGGTGAA GGAAGAGAAA GGTAAGAAGA CAAAGAAGGA GAAAGAGTGG GTATATTCAT TATGCTTCAT CGGAATGTTC TAACGTTATG CATAGAGAGG AAGAAGAGGA GGAAAGGTAC AAGTGGTGGG AACAGGATGC TTTGGGTGAT GGGTCATCCA AGTGGACGGT CCTTGAGCAC AACGCTGTTC TCTTCCCTCC TCCTTATGTT CCTTTACCCA AGAACGTGAA AATGAAGTAC GATGGTAAGT CTTTTGCCTA CTCTGATTTA TCCTATGACT AAAACCCAAA CGCAGGCGTC TCACTTACCC TCCCTCCCGA GTCTGAAGAA GTCGCCGGTT TCTTCGGTGC CCTCCTTGAA ACCGACTATG CTCAAGATGC CAAATTCCGT GAAAACTTTT TCCGAGACTT TAAGGCTATC GTCGAAAAAT ATCCACCCAA GGAGGACGTC AAGGTTAAGA AGTTGGAAAA GTGCGATTTT AGACCGATGT TTGAGTACTT TGAAAAGGAG AAGGAGAAGA AGAAGGCGTT GACTAAGGAA GAGAAAAAGG CGTAAGTCTG ACGTTCTAGA TTGGACAGAA TGAGACTGAC GATAAAAGGT CAGGATTAAA GCGGAGAAGG ACAAGCTTGA AGCACCGTAT CTCTATGCGA ATGTTGATGG AAGGAAGGAA AAGGTCGGCA ACTTCCGTGC AGAACCTCCT GGATTGTTCA AGGGTCGTGG TGAACATCCC AAGAAGGGTA CTGTCAAGGT GAGTTCAATA GTTTTTATCG CTGGTCTTTC GCTGTTTCCT GACGTTTCTG TCCATAGAAC CGTCTCCGAC CTGAAGATAT CATTATCAAC ATTGGCAAAG AAGCTCCTAT CCCTGTGCCC AACATTCCCG GTCAGTGGAA GGGTATCCAG CATGATAACA CAGTGACTTG GCTCGCTCAT TGGAAGGAGA ATGTCAACGG TAACGCCAAA TACGTCTTCT TGAGCGCTGG TAGTGCGTGG AAAGGTCAAA GTGATCGTGC CAAGTTTGAA AAGGCCCGTG AGCTTATCGT GGGTCATTAT TTCTCGCTCC TTTTTTTCAG GCTACTAATG TTGATTTTAG AAACATGTCG ACAAAATTCG AAAAGACTAC ACTGCCGACC TCAAATCCAA AGTCATGGCT GACCGACAAC GTGCCACCGC CCTGTACTTT ATCGATCGTC TGGCTCTGCG AGCGGGTAAT GAAAAGGGTG AAGATGAAGC GGATACTGTC GGCTGTTGTT CTCTGCGATA CGAACACGTG ACGCTCTCTC CACCGAATAC TATCATCTTT GATTTCCTCG GTAAGGACTC GATGAGGTTC CATCAGGAAG TCGAGGTCGA TCCGCAAGTG TTCAAGAACA TAAAACTGTT TAAGGCTGAT CCGAAGAAGA AGGGTGACGA TATCTTTGAC CGACTGACCG TAAGTATATT GTTAATCAAT GGGATGCCGC GCAGAGCTGA CGATCGTTTA AGACCACTCT TCTTAACAAG CACCTCAACA GCATGATGCC TGGTCTTACC GCCAAGGTTT TCCGTACCTA CAACGCCTCA TGGACTTTCC AAGAACAACT CAAAAACACA CCTAAGAACG GAACTGTAGC CGAGAAGATT GCGGCGTACA ACACTGCCAA TAGGGATGTT GCCATCTTGT GTAATCACCA AAAGAGTGTC AGCAAGGGTT TTGAGGGCAG TTTTGCCAAA GCCGAGGATA AGATTCGTGC CCTCAAGTAT CAGCGTCTCA AGCTTCGTCT CCAACTTTTT TCTCTTAACC CCAAGATTAA GAAGAAGCAT CCCGAGCTTG CGGAGGATGA GTCTGATGTG GATGACGAAT TTATGGAGCG CCACGAAGCC GAATTACTCG AAAAAGCTTT GGAGAACGCA AAGAAGAAAT GGGATACGGA TAATGTCAAG CTTGAAGGGG ATGGGAAGAA AAAGAAGACG AAGGGAGAGT TGGATGAGAG GTTGAGTGAG ATCAAGGCAG AGTTTAAGGA GTTGAAGAAG GAGAGGAAGG CTAAAAAGAT TGATGCCAAG AGAGGAGGTA AGCATTTTCT TTGATCATGC TGTTGAAAAT GCTGATAAAA GTGAACAGCC ACGGAGGAGA AACTTCTTGC TCAGGTCGCC AGGATCGACG AACGTATCGC TACCGCCAAA GTCCAGCTTC AAGATCGAGA CAAGCTCAAG GATGTTGCTT TGGGCACATC CAAGATTAAC TATATCGATC CAAGACTAAC TGTCGCGTGG GCGAAGAAGT TTGATGTTCC TCTCGAAAAA CTGTTCTCCA AAACCCTGCG AGAAAAGTTC CCTTGGGCTG AGGCGGAGGC TGGACCGGAC TGGGTTTTCT AGATGGGGTG CACGTGCTGG GGATCCGGGG ATCCGGTGTG GGAGTGGGAG TGGTATCGCA TACTTTCATA TAGGCTTTTA CACAAAACAA TGGTCTTCTC GGTTT
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Protein sequence | MSFPPVQPAD NGMAVVAPNL ESNPTTVASH APQIAVKDEN DSMSEDEQPL AKSKANGARK RVENSSDEEE KPLSKKPRAN GVNKKRVVAS SDEESDVSPP AKRPVSKQSK PATPDSESDD DQPLAKKANG LAASKRQAKK AEELSEESSE EEKPLAKVAK RVSAKKMKSE TEDSEEDRPL AKKKAPVKRA PAKKSAKKEP SESEEDEKPL AKNARGKAKA ATVKEEKGKK TKKEKEEEEE EERYKWWEQD ALGDGSSKWT VLEHNAVLFP PPYVPLPKNV KMKYDGVSLT LPPESEEVAG FFGALLETDY AQDAKFRENF FRDFKAIVEK YPPKEDVKVK KLEKCDFRPM FEYFEKEKEK KKALTKEEKK AIKAEKDKLE APYLYANVDG RKEKVGNFRA EPPGLFKGRG EHPKKGTVKN RLRPEDIIIN IGKEAPIPVP NIPGQWKGIQ HDNTVTWLAH WKENVNGNAK YVFLSAGSAW KGQSDRAKFE KARELIKHVD KIRKDYTADL KSKVMADRQR ATALYFIDRL ALRAGNEKGE DEADTVGCCS LRYEHVTLSP PNTIIFDFLG KDSMRFHQEV EVDPQVFKNI KLFKADPKKK GDDIFDRLTT TLLNKHLNSM MPGLTAKVFR TYNASWTFQE QLKNTPKNGT VAEKIAAYNT ANRDVAILCN HQKSVSKGFE GSFAKAEDKI RALKYQRLKL RLQLFSLNPK IKKKHPELAE DESDVDDEFM ERHEAELLEK ALENAKKKWD TDNVKLEGDG KKKKTKGELD ERLSEIKAEF KELKKERKAK KIDAKRGATE EKLLAQVARI DERIATAKVQ LQDRDKLKDV ALGTSKINYI DPRLTVAWAK KFDVPLEKLF SKTLREKFPW AEAEAGPDWV F
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