Gene CNH03140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH03140 
Symbol 
ID3259148 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp224028 
End bp225722 
Gene Length1695 bp 
Protein Length378 aa 
Translation table 
GC content52% 
IMG OID638258171 
Productexpressed protein 
Protein accessionXP_572483 
Protein GI58270654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.238117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAATTAACCG AACGCAGGAT CACATCTGTG ACCTGTGCTG GAGAACATTC GGGCCGAGTC 
GTTGACCTCG CCTCGGCACG CTGGCTGTGC TCGGTACGTT CTACCAAGTT GATTTCGCCG
CAAGCAGGAT CCCATTTATC TTGAAAAAGG CAGTGACTAT GTATTTACCT CGACGGACAA
AAATCACTCT TGCAATCTGC ACTTTGTCTT AGTGATTTCA CCAGTTCTCC ACATTGTCTT
CCTTATTCTA TCATCTTTCC CATTAAATCG AACATGACAC CGGTACAAGT CACCGCCGAA
CGACTGGCGA CGATTCCGAT CGGGAACTGC ATCCAGTGTC TTGGATCACA CCCAAATCAT
ACGCTTGAAC GCAAGTTCGA AGCTCTGCAG AAAGGAGGAT GGAAGCATAC CGAGTTCTCG
TTTGCGGAAT ACTTCAAATG GGTCAGGCAG AAGGAGCCTA ACTCCGTGTG AGTATTCTGC
ATCGCCAAAT CCCAGAGTTT GGTTTTAGCT TATATTGTCG CCGTCTCAGG CCCAACGTCG
ATCCCGAAAC CTATGGAGAC GCCGAGGCCG AAGCTGGGGA AGAAGAGGCG TGGGAGGCGC
TTTATCGGCA CGCACCCGAG GCCAAGGCTT TGGCCACCAA GCACGGGGTG AAAATGTGGT
CCTTGCAATG CCTTGGACAA GTTGACAGCT GGCCAGCGGG GAGCAAGAGG GAGATCCGAG
GGCGGGAGAA AGCTGTTCAC TGGCTGGAAT TGTGTTCCCG CTTAGGCCTC GAGTTCTGCC
AGGTAGGTCA AGGTCTCGCA ATGTCGTCAT TTCTGGTTGG TGCTGCTGAC TAACATCTCC
ATAGATCGGT GTGAACGATC AATACGATGC AGTCGCGCCT TTCGAGAAGA CCGTGCAGGA
TCTAGTTTGG ATTGCCGACC AAGCGGCAGC ACGGGGTGTC AAAGTCGCCT ACGAATCCTG
GAATTTTGCG CCGAAGAATA ACCAGTGGGA GGCAACATGG GCAATTGTGC AGGCGGCGGT
GAGTCTTGTA TACCCGACGG ATGTTGTCTA ATGCATGCTT TCGGATAGAA CCATCCCAGC
CTCGGTTTGT GTATCGACAC TGCTCAATGT GCGTTGGCGC CCGCTTACGG CTTCGACCCT
ACTTCTGGAC GTGGATTCAC CCCGGTGGCA GTGCAAGCAT TACTTGAGCG TCTTGCTTCA
GTGCCCGGTG ACAAGATCTT TTTTGTGGAA ATCTCAGACG TCCTCGCGCC CCAACCTGCT
CTTCTCTGCG GTAGCCCCTT CGATCAGTGG CATCTCGACC AAGGGCCCGG TTACCGAACC
GGATTCACGT GGTGTCGATG TGCAAGGGTC ATCCCCCACA TTGGGAGGGG AACGGGCAAA
CTAGTGCAGG GTGAAAAGGG TCTCGGAGCC GGTAGGACTG CCGAGATTGT CAAAGCCATT
CTAAGCACAG GTTTCAACGG TGAGTTTCCC CATCTTTTCT GTCTTCATTT CTCGATTACG
TCCTAACATC GCAATTTCCA CGTAGGCCCG ATGTTCTACG AGTGTTTCGA GGTGGCGGAG
CAGGAAAAGC CTGACCTTTC AATCCCTGAC GAACTTGTAC AAGCTTCAGT CTTGTCATGG
GAGCGCATGA GCAAGGCGAT TCTCAGTTGA TGTACTCAAT AATTAAAGGA ATCAAATGCA
TTCATCAATC ACATG
 
Protein sequence
MTPVQVTAER LATIPIGNCI QCLGSHPNHT LERKFEALQK GGWKHTEFSF AEYFKWVRQK 
EPNSVPNVDP ETYGDAEAEA GEEEAWEALY RHAPEAKALA TKHGVKMWSL QCLGQVDSWP
AGSKREIRGR EKAVHWLELC SRLGLEFCQI GVNDQYDAVA PFEKTVQDLV WIADQAAARG
VKVAYESWNF APKNNQWEAT WAIVQAANHP SLGLCIDTAQ CALAPAYGFD PTSGRGFTPV
AVQALLERLA SVPGDKIFFV EISDVLAPQP ALLCGSPFDQ WHLDQGPGYR TGFTWCRCAR
VIPHIGRGTG KLVQGEKGLG AGRTAEIVKA ILSTGFNGPM FYECFEVAEQ EKPDLSIPDE
LVQASVLSWE RMSKAILS