| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02480 |
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| Symbol | |
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| ID | 3259297 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 427846 |
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| End bp | 430577 |
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| Gene Length | 2732 bp |
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| Protein Length | 691 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638258237 |
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| Product | mitochondrial DNA repair and recombination protein PIF1 precursor, putative |
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| Protein accession | XP_572423 |
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| Protein GI | 58270534 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.255709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGCCCATAAG CCGCAATGCC AAAACCAGGT TTCTACGCTG TCAGATTCGG GAGACGTCCA
GGAGTGTACA TTACCTGGGC AGAATGCCAA CAACAGGTCA GTTATCCATT TATTTGCTAA
ACATTTTGAC TCACCTTGCG TTATCGCGTT TTAGGTACAT ATGTTCCCCG GTGCTGTATT
CAAAAAGTTT GGCACTTATG ACGAAGCTAG TGTTAGTCAC CAAGCGGTTC TTCTCGGGAT
CTGCTAATGT TCACAAAGTT ATGGGCATCT CTAAGGCCAC AAACTCCTCC ACCGCCGGAA
ACATCAGAGA CAGATCGGAA GGATGGCCTG AAAGAATCAG ATAAGGGAAA GCGTATCAGT
GATTCTGCCG ACCCATCAGC TCAACATGGT CCGAGATCCT CTTCCAAGGC ATCACCCTCA
CATCCTCTGC ATCTCCCGTA CCAACAGGAT TGCAAGCGCG AACGGTCAGA AGACACTGAT
GATACGGAGT CACCAGGAAG GAAAGCAAAG GCAGGCAAGC ACGATCGTAA TGAAGATAAA
AACGGGTATG ATGGGTTCAC GGCCATGGAT GACTATATAT CGGTACTTCC CCCAGATGAT
GAGGCCGGCC AAAGCTCTTC AACGCAAGTA GACGGCAATA TAACGACGGC AGAGCTTCCT
GCAGTTGGAG GGGAGCCTGA ACTTTCTTCT CAGCAATCAG AAATCCTCGC AAAGATCATG
AACGGTGAAA ACTTCTTCTT TACAGGATCC GCTGGTACGG GGAAATCTGT TTTGTTACGA
GCTATCATCA AAGCATTCAA GGAGAAGGAA GGAGAGAGAG AACAGAGAGA GGCCACCCGA
TCATTCAGGA GTTGGCAAGG ATACCGTGGG GCCCAAAAAG CGGAGAAAGA AGAAGTAGTC
AAATGGTCAC TTGCAGTCAC AGCAAGCACC GGTATGGCTG GCGTGTAAGC ATTTCGTTAC
CAACCCGAGT CTCGAGACAA AACTAATTTT CATGCAAGGA ACATTGGCGG TACGACGATT
CACTCTTGGG CAGGGATAGG ACTTGGCGTA GACAATGCAG AAAAGCTGGC TAATAAAGTC
CGGGCCAATG CGCTATCTCG CAAACGTTGG AGAACAACTG CAGCTCTAGT CATTGATGAA
AGTAAGCGCC GTAAACATCA CAGCATCGTT TGTTTTTGCT TACTGGCTGT AAAAAAAGTT
TCGATGATTG ACGCCCCACT CCTCGACAAA CTCGACCACA TCGGCCGTAT AGTTCGCAAC
GATGACCGTC CCTTTGGAGG TATCCAACTC ATCCTCACCG GAGACTTTTT CCAACTCCCA
CCTGTGACTA AGGGCCAGAT CCCTCAATTC GCTTTCGAAG CTAAATGCTG GCCCAAACTT
TTCTCTCACA AAAATATTAA GACCCTCACC CGCGTATTCC GTCAGCGAGA TGACAGATTC
ATTAATATGC TCGAAGCTAT GCGTCGGGGT ACTATCACGC CCGATGACAC TGTACTCCTT
CAATCTCTTA ACCGTCCGAT CGAATACCCA GATAACATCG AACCGGTTGC CCTTTACCCT
CAAAAAAGAG ATGTGGAATT TGTCAATAGC GCTCGGCTAG ATGCTTTACC TGGAGCGGTA
ACGCTTTATG ACTGTCACGA CGAACCGGGA TTCACCGCTG GTGGTTTCCC AATCAGTAGA
ACAGAGGCAA CTATCAAACT GAACAAGAAT ACCATCTGGC CTCAGCACCT GTCACTCAAA
GAAGGTGCGC AGGTCATGCT CGTAACAGTG CGTCGCTTGT CCTTCGTTGT GTCTCAGAGA
GCCACATTTA ACTGAAACAA CTTCTTACTC ACCCTGACTG TAGAACATGG GTGATGGCGT
CCTAGTGAAT GGCTCAACCG GTACTGTCGT CGACTTTCTC ACTATCCCAG ATGCTATCAA
ACGGGGTATC CATCTACCCG AAGCGGCTAT CAAAGGCCAA ACATCGATGG ATCTGGAATT
TCCGGTAGTA GCATTTGCCC AATCTAAATT TGCGAGGAAG AAGGTCCCAG AAAGAGTTAT
CATCCCTTCG ATGAGCGTTG ATATGCTGAA TGCTTTGTAA GTCGCTTTTT CGCTTCTGGC
GTTTAGCTTG ATTTTGGAGA GAAATACTTA CCTTGCAAAT AATCAAGGGG ACAGCCGGAA
GCGACTAGAT ATCAAATCCC GCTGATCTTG GCATGGGCAC TTACCATCCA CAAAAGCCAG
TGAGATATAT ATCCCTTCTT CTTGCTTTCT GATCCGCGCC CAAAAGCTAA GAAATTACAG
AGGTCAAACA CTGGAGCGAG TTAAGATTGA TCTTGCCAAA ATTTTCGTTG AAGGTACGTG
CATTTCGTGT CGATCGAACT GGATTGTCCA TCTGTATGAG ACTGACTATG TTTGATGACG
TACAGGTCAG ACATATGTTG CTATCTCCCG AGCGGTCAGT TTAGATAGTT TAGAAGTCCT
CAATTTCCGT CCCCACTCGT GAGTTCTCAT TCAGATATTA TACATCACAT TATTTTTTTT
CGAAACGGGA CCTTACCTGA TGTGTGTACA GTGTAAAAGC CCATTCAAAG GTCATCGATT
GGGCAAGGCC ATACGAGGAA GAGCAAGCGG CAGAGGAGGA GTGGAATAAT CTCGAGGATA
ACATTGGTAT ATTGTATTAG AAGAGCATCT TTCATTAGCC ACGCATCATA TCTCTCAAAT
TATCATTTGT GTACTCGACC GCCCATGTCC CA
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| Protein sequence | MPKPGFYAVR FGRRPGVYIT WAECQQQVHM FPGAVFKKFG TYDEASLWAS LRPQTPPPPE
TSETDRKDGL KESDKGKRIS DSADPSAQHG PRSSSKASPS HPLHLPYQQD CKRERSEDTD
DTESPGRKAK AGKHDRNEDK NGYDGFTAMD DYISVLPPDD EAGQSSSTQV DGNITTAELP
AVGGEPELSS QQSEILAKIM NGENFFFTGS AGTGKSVLLR AIIKAFKEKE GEREQREATR
SFRSWQGYRG AQKAEKEEVV KWSLAVTAST GMAGVNIGGT TIHSWAGIGL GVDNAEKLAN
KVRANALSRK RWRTTAALVI DEISMIDAPL LDKLDHIGRI VRNDDRPFGG IQLILTGDFF
QLPPVTKGQI PQFAFEAKCW PKLFSHKNIK TLTRVFRQRD DRFINMLEAM RRGTITPDDT
VLLQSLNRPI EYPDNIEPVA LYPQKRDVEF VNSARLDALP GAVTLYDCHD EPGFTAGGFP
ISRTEATIKL NKNTIWPQHL SLKEGAQVML VTNMGDGVLV NGSTGTVVDF LTIPDAIKRG
IHLPEAAIKG QTSMDLEFPV VAFAQSKFAR KKVPERVIIP SMSVDMLNAL GQPEATRYQI
PLILAWALTI HKSQGQTLER VKIDLAKIFV EGQTYVAISR AVSLDSLEVL NFRPHSVKAH
SKVIDWARPY EEEQAAEEEW NNLEDNIGIL Y
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