| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02470 |
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| Symbol | |
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| ID | 3259087 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 430701 |
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| End bp | 433528 |
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| Gene Length | 2828 bp |
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| Protein Length | 706 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638258238 |
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| Product | DEAD box family helicase, putative |
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| Protein accession | XP_572422 |
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| Protein GI | 58270532 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.384709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCT CGAGGTGTGC TGCCAGACTA TTTTCACTCA CCAAAGTACT CTGCCCTCAC
ACTGCTTCTC TCACTCGTCC TCCCATACAT CCAGCCAGGC CATATGCCAC TATCCTTGCC
TCATCGCAAA ATCTCCATCA ACCCCCCAGT GATCATGCCG GCCCCAACAA TACAACTCGT
AATCAGAATA TAACACTTCG ATCTTACCAG GAAGCAGCCA TTTCCGCATG TCTTGATGCC
CTCCAATCAG GATCACGCCG CCTAGGTGTT TCTTCCCCAA CTGGTAGTGG CAAAACCACG
ATATTCTTGT CCCTTATCCC TCGAGTGCCG TTTTACGCTT CCCGTGGGAA CGACAGTCAT
CCAAGAGATG GAAAGGGACA AACTTTGATA ATCGTTAATA GCGTTGAGCT GGCAGAACAG
ACTCAAAAGT CAGCAGAAAG ATTACTAGGT GATGAGTGGA CAATCGAGAT AGAGCAATCG
AAAAGAGTAG CCTCAGGGTT GGCGGATGTG TAAGCTCATT GTGCTTGGAA ATTGACAGTA
TTGCTCATGC AGACATGCCA GGACAATAGC GACATATCAA ACTCTTAATA ACCCTGATAG
GCTATCCAAG TTTGATCCTT CAAAATTCAA GCTTGTCATC GTCGATGAAG CCCATCATTC
CGCTGCCCCT TCGTATGATT ACTGTCATTT ACAATTTCTC TAATCAATGC TGACCACCAT
ATAGTTATCT CCGGCTTCTC CACTACTTCA ACGAAGATGT AAAGATTCCC AAATCACCTC
AAGCACCTTC ACCTCATCTA CATGGTTTCA AAGTTCCCAT CATCGGATTT TCAGCTACCT
TTTCGCGTGC GGACCAGCAT TCGCTCCATT CTGCTTTCGA GGAAATCGTT TTTCACAGGG
ATATGAAAGA TATGCTGAGC GAAAAACATT TAGCTCCAGC TAAACTGACA ATCGTCAAAG
CAGACTTGGA ACTGGACGAG GTGGAAACGT CAAGTGGAGA TTTCAAGAAC GCCGCATTGG
CTCGAAAGGT GAATACAACA GAGATTAATG AGCTCATTGT AAGGACATAC CTTCACCGTG
CTTGTGAGTC CTGTCCAAGG TTTCCCCTAC GGCCTTCCAC CTAGTCCCAT GCTGATGAAT
TTGTGTTATC TTGCCATGTC TTGTAAAATC TACCAGCTGA ACGTCGCTCA ACCTTGGTAT
TTTGTGTCGA TCTCGAACAC GTCAGTGCCC TCACCCAAAC GTTCCGTAGC GCGGGCATAG
ATGCGCGTTC AGTATCTTCC AAATCGAAGC CTGAAATGAG AAAAGCGACC ATAGCCGCTT
TTGGAAAGGG CGAGTTCCCG GTACTGATCA ACTGTGAGGT CTTGACTGAG GGTACAGATA
TTCCTCAGGT AAGCAATTTA AATTTCAAAT CAAATGGCAT GAGGATGGTT GCAGAATGTT
GACATGCAGC TAGATTGATT GTATCCTTCT TGCCAGACCT ACACAAAGTA GGAATCTCCT
CGTACAAATG GTAAGTGCCC TTTCACAATA CACCGTTCGC CTACCCTCTG AAAATGCGCT
ACCTCAAGGC TGACCTCTGA AATAGGTCGG GAGAGGCCTT CGATTGAGTC CCGAGTCCGG
CAAGACGGAT TGTCACATCA TAGACTTGGT AGATAGCGTG GCGAATGCTA ACGGGCTCAT
TGTCACACCG ACCTTACTCG GTCTTTCACT GGACGAGATG GATGTCGAAG ATCACGGTCG
CGAATCAACT GAGAAAGCAA AGCCTCAAGG TACGTTTCAT TCTTGCACAA TCGCCCCCGC
CATTGAAAAG AAAAAGAGAT CGGTATGGGC TAACATACCT TCCTCGCTTC TCACTTAATA
GATGAATTAG AAACAGTTCC TCCCATAGCT CCCGACTATG ATATTACTTA TCTGGACCAA
GATGATCCAT TCCATGTTGA TGTATTTGCA CAACCTGTCA TTCAAAAGGT CTCCAAAAAC
GCTTGGGTTT CATGCGGTAA CGGGAAATAT GCTCTCGAAC TCATTGGTAC GTCGCCTACC
TTCTATTATC CCATCCTTCA TGATTGATTC TCCAAATGCT GACTGGATAA AAATTTGTTC
CATGGTTTAG GCAGCGGAAC TATCATCGCA ACTCGAAACG ATCCGCAACT CTACTCCATC
AGCTACCGTC CCAACTTACC TCACGAACTC ACACCGTTAG GCAAAGGCAG ATCACCATAC
GGCAGCGTGA GAGTAGTAGG GCATGCACCT GATTTGGAGA GGGCATTGCA GGCCGGGGAC
AAGTTTGCGG AGAATAAGTT GGGTAGGGGG AGGTGCTTAG CGTGAGTCTT GGTGCTTTTT
CTATCCCAAC CGCGGTTTGT AATTCCCAAA AAAGACGCAA AACTGATCAA AAGCCGTACC
GTATAGATTG TCGAGATATG CTCCTTGGCG TCAGAGACTG GCAAGTGAAA ACGCCGTCAA
GCACCTATTG AAACGTCTAG GGGAGGACAA TGATTCGCTT CTTAACGGTC AGGGGAAGGA
GAGAGTGATC AGTTTATGGG GCAAGAAAGT GTCTGTGGGA AGCTTAACGG CGGGAGAGGT
ATCTTCTTGG TTATGTGCCA TGAAGAACGG TGCCAAGGTC AGTTTACACA CCACTTTTCC
ACTAATGACG AGGACGAGGA CGGAGCTAAT TACGAGTACA TACAGAGCAT CAGGATAGCG
AGAGATAAGT CGGAGGAGAA AGCGAGAGCA AAAGCCGAGG CTAAGGCTGA GAAGGAAAGA
CAGCAACAGC TGAGAAACTT GCCTCTCCCA CCTTCAACAT GACGAAGGCA TCGTACGTCT
CTTTTGCC
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| Protein sequence | MPTSRCAARL FSLTKVLCPH TASLTRPPIH PARPYATILA SSQNLHQPPS DHAGPNNTTR
NQNITLRSYQ EAAISACLDA LQSGSRRLGV SSPTGSGKTT IFLSLIPRVP FYASRGNDSH
PRDGKGQTLI IVNSVELAEQ TQKSAERLLG DEWTIEIEQS KRVASGLADV TIATYQTLNN
PDRLSKFDPS KFKLVIVDEA HHSAAPSYLR LLHYFNEDVK IPKSPQAPSP HLHGFKVPII
GFSATFSRAD QHSLHSAFEE IVFHRDMKDM LSEKHLAPAK LTIVKADLEL DEVETSSGDF
KNAALARKVN TTEINELIVR TYLHRASERR STLVFCVDLE HVSALTQTFR SAGIDARSVS
SKSKPEMRKA TIAAFGKGEF PVLINCEVLT EGTDIPQIDC ILLARPTQSR NLLVQMVGRG
LRLSPESGKT DCHIIDLVDS VANANGLIVT PTLLGLSLDE MDVEDHGRES TEKAKPQVPP
IAPDYDITYL DQDDPFHVDV FAQPVIQKVS KNAWVSCGNG KYALELIGSG TIIATRNDPQ
LYSISYRPNL PHELTPLGKG RSPYGSVRVV GHAPDLERAL QAGDKFAENK LGRGRCLALS
RYAPWRQRLA SENAVKHLLK RLGEDNDSLL NGQGKERVIS LWGKKVSVGS LTAGEVSSWL
CAMKNGAKSI RIARDKSEEK ARAKAEAKAE KERQQQLRNL PLPPST
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