Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNG04200 |
Symbol | |
ID | 3258674 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006692 |
Strand | - |
Start bp | 1183411 |
End bp | 1186241 |
Gene Length | 2831 bp |
Protein Length | 486 aa |
Translation table | |
GC content | 46% |
IMG OID | 638258043 |
Product | alpha-amylase, putative |
Protein accession | XP_572174 |
Protein GI | 58270036 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.917737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTGCATCTC TGGGCAAGAT ATAAATTCCT CTTCTTCTCT TCCACCAATT CCTTCTTCCG AACCTGACTA GGCCGACACA TACGTATCAG TAGAGTTATT CAAGATGGCT CACCACGCGA ACGAAGATCA CCATGGCAAG CCTGGTATGT TCTCTTTCGA TGAGTCGTTT CCTCCGTAAT CAAACTAGCT AACTTCAACT AGGAAACTTT ACAATGATGC AGTACTTCGA ATGGTACGCT GAAGGTGGTG GTGTACATTG GAAAAAGTAT GAAAGCGAAT CCGAAAGACT GGCCAACATG GGCATCACTG CCTGTTGGAT TCCTCGTGAG GCTTTCTATT GAGACAGAAC AAAGCCAGGG AAATGTGCTG AATAAGACTA ATCGGCAGCT CCTACTAAAG GCTCTAGCCC TAAGGGTACA GGATATGATA TGTGAGTAGG CTTCAGACTT TCTCCGCTCT TTTCTCGACT GACGTGATGG CCCCTCAGTT ATGATGTTTG GGACTTGGGA GAATTCGACC AGAAAGGATC TGTCGGTACC AAATGGGGTA CTAAAGAAGA TCTTTTAAAA GCAATTAAGG CTGCTTCTGA GAAGGGCATT ATCACGTACA TTGATGCTGT CTTGAATCAC AAGTAAGTCA GCGCTGAGTA TCTTTGTCAG TAATGGTTAG GCTGATAAGG ACATTCCTTA GGGCCGGCGC TGATGATAAA GAAGAATTTA TGGCCACCAT GGTGGACGAG AATAACCGTA ACAAGGAAGT AGGAGAAATG CACAACATTG AAGGCTGGAC CAAGTGCGTC CGCCACTGAA CAAATTACGT CGACACCACT AATGTCATGG GTTTGCCAAG GTTCACTTTC CCTGGCAGAG GCGACAAGTA CTCCGACATG AAGTGGAATT TTAACCATTT CACAGGGGTA GACTATGACG CAAAGACTGA GACCACCGCT ATCTTCAAGG TGGGTCCCGT TTCCGACAGG ACACCCAGTC TAATTATCGT TCGGAGGAAC TGATGATAGA TTTTCAGATT CAAGGGGACG GGAAGCATTG GGCCACCGAT GTTGATAAAG AAAACGGGTC TTTCGATTAT CTCATGTTTG TAAGTCTTCT TCCCGTTAAG GGTGAGTTGT GAGGAGGGCT AATGAGGATT AGGCCGATAG TAAGCGTTGC TGCAGGCAGC GAACGTGGCG TTGTTGAACT AATCTTGAAT TGCAGTTGAC CATTCACACC CGGATGTTGA GGCCGAACTC AAGTGAGTCA TGATATGACA ACATTCCATC AATTCGGCTG TTGACGATTG GCTCTAGCAA ATGGGGTAAA TGGGTCCTCC AAGAGACAGG TGCCTACGGT TTCCGGTTCG ACGCCGTCAA ACACATCTCT GTGAGTAATT CATTCCCTCG TATTACTATC TGTTCCATAT GCTTATATTC GCTGTCTAAT TTATAGCAAT CTTTCATTGC CCAGTTTGTC AAGCAACTTC GAGAAGGCGA GAACTCCAAG ACAAAGGCTT TCTGCGTCGG AGAGTTCTGG CATGGTGCGT AACGTCATCC TCCCTTGGAT AGGATTAAGA AGAGATATTG ATCAACCTTG CAGACTCTGT CGACGCTCTT GAAGCATATC TTGATGGACT TGGGACACAG TTTTCCTGCT TTGACTCATG CTTGCAAGGT TTGTTCAGCA CTGCTTTTTC ACTGTATTCT TCGAGCAAAG AGGGTAGCTG ATATCTTCAT CACAGATAAT TTCCACGTAT GATATCTCGT CTAATTCGGC ATGATGATAG GGCTTGCTGA CCTTCCTTTA GCAAGCTGGA GAAGCGAGGG AGAATTACGA CCTGCGAAAG ATTTTTGACG ATTCCCTTGT TCAACGTCGA CCCCTCGATG CCGTGTAAGT TCCATTATTT CCTGTGTATT GAAAGAGCTT ATGAGATCAT TAGGACTCTC GTTGACAACG TATGATTCGT TCTGCTTTGG GATTTCATGT CCACCAAGCT AATTGATAAA CGATAGCACG ACACTCAGAT CGGTCAATCT CTTGAGAGAT GGGTATCCTC AGCCTTCAAA CCCTTGGCCT ACGCTTTAAT CCTCCTACGC GTTGACGGTT ACCCGTGAGT TTACTACCAC TTTGCCTTTA CTTATTTAAA CCGAAACATG GTGATACTTA CTTTGTGTCA TGGTCCGCAA TCGTAAAGGT GTGTGTTCTA CGGCGATCTT TATGGATGTG GCGGAGAGAA CCCCCAGGAG CCCATGAACC AGCTCGAAGA CATTGTTCGC TGCCGAAAGC TTTTCGCTCA CGGCGAGCTT CGTGATTACT GGGACCATCG TAAGTTTCAT TACTGATCTA CACCTCTCTC ATTACCAATG CCAGTCGAGC TAACATTATC GACCTAGCCA ATTGCCTCGC TTGGGTCCGT GTTGGCGACG AGGAGCATGA CGGTTGTGTT GTGGTGATTT GCAACGGGAA AGATGATGGT TCGAAGCGGT GCGAAGTTGG TGTAGAGCAT AAAGGGGAGA AATGGACTGA TGTACTCGGC TGGCATCAGG GAGAGGTTAC CATTGGGGAT GGTGAGTTTT AGCATATTTG TAGCAATTGT TGAACAGAAG AATGGGTTGG CTGACATGGG TCTCAACAGA TGGCTGGGCC GAGTTTTACT CCCCTCCCGA GAGTATTTCC ATCTGGACTA AGGTGGATGC CCGTGGAAGG GATGAATTCC AGAAGTGAAA GGAAAATGAT AGCAATAGAT TGTAGAACCA GAATCTGCGT GTGATAAGTT TGTGCCAAGC ACATGAATGT TGATGGACTG GTAGATATGG GCAATGCATC AATACCGAAA A
|
Protein sequence | MAHHANEDHH GKPGNFTMMQ YFEWYAEGGG VHWKKYESES ERLANMGITA CWIPPPTKGS SPKGTGYDIY DVWDLGEFDQ KGSVGTKWGT KEDLLKAIKA ASEKGIITYI DAVLNHKAGA DDKEEFMATM VDENNRNKEV GEMHNIEGWT KFTFPGRGDK YSDMKWNFNH FTGVDYDAKT ETTAIFKIQG DGKHWATDVD KENGSFDYLM FADIDHSHPD VEAELNKWGK WVLQETGAYG FRFDAVKHIS QSFIAQFVKQ LREGENSKTK AFCVGEFWHD SVDALEAYLD GLGTQFSCFD SCLQDNFHQA GEARENYDLR KIFDDSLVQR RPLDAVTLVD NHDTQIGQSL ERWVSSAFKP LAYALILLRV DGYPCVFYGD LYGCGGENPQ EPMNQLEDIV RCRKLFAHGE LRDYWDHPNC LAWVRVGDEE HDGCVVVICN GKDDGSKRCE GEVTIGDDGW AEFYSPPESI SIWTKVDARG RDEFQK
|
| |