Gene CNF03500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF03500 
Symbol 
ID3258349 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand- 
Start bp1035442 
End bp1036543 
Gene Length1102 bp 
Protein Length164 aa 
Translation table 
GC content45% 
IMG OID638257468 
Productcell wall organization and biogenesis-related protein, putative 
Protein accessionXP_571425 
Protein GI58268538 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.556439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGAGA AAGAGTTGTT GTGCAAACTC AAAAGCCGCA CGAATAGCGA AATTGCGATA 
AAACAGTATG CTTTTGTCGT ATGGCTCAAA ATCATCTTAC ACGTTACGTG AAGACGGTCG 
TGTGAGGACG TATGAATGAC ATGATGGGAA GCAGCAAGGG AGGCCACAGT GACAGTTTCT 
CCTTCATCCG TCGGTCTTCG AGTCTTCTCG GCCAGGCATG TTTGATCGTT TGATAATTAA 
TTAAAATAAG AATAATAAAT AATAAGAGGC CGGCAATAAC CGCCACGGGG TCTTAATTAT 
TGCTTCTCGT ACAGACTTAT TATTCCGACG GCTCTCGGAA GCCGCATGGT CTAATAGTTT 
CAGTGAATCA GAGTCTGCTT TGGCGAGAAA CGCTCATCAT ACTTTTACTT TACCAAAAGT 
TAGCACCAGT TGCACGCAGA GACAATACAA AATTCAAAGA TGTCTGACCA GCTCTACGCC 
GTCGCTGACT GTGAGAAGTT ACTGCTCTCT GCTCTTTGTC CTCTCATTGA CCGAGTGTCT 
GGTTCTCTGT TCGATCCTAG TCTGTCTCAT CCCCATGGGT CTTTCTGTCC CTTCTGTTGG 
CCCTCAGATC GCAGAATGTC AGAAAGTTCT TGAGAAGTCT GGACTGGAAT ACAAGGTATG 
TCGGTCTTGT TGCTTGCAAA GCATTGTTAC TCTAATGCTT CATTTACCGT CATAGTTGCA 
GTAAGTCCGT TACCAACAAA ACAGCGTGAT CGATCAAAGG CTGAGAAGAT TAAAGCGGTT 
ACGGAACTAA CATTGAAGGT CCCTGGGATG AAGTTATGAA GGTGCGTAAT GCTTGCCTTT 
ACTTGCAGTC CCCAGTTGAT ATAATATGTA CAGGCGATCG GAGACTGTCA CAAGGCTGTT 
CACGCCATGG GTACCCCTAG AATTGCGGTA TGTCTTGGTA TGCATCATTC TATGTCCTTA 
AACAAACTGA CAATGAGCCT TAGACCGATA TCAGGATTGG TACTCGAACG GACAAGAGTA 
TCACCTCTGG AGGAAACGAT GGGAAAGTCA AGCGTGTCGA AGAGATCCTC GCCAAAGAGT 
CATCCAAAGC ATAAATAATT AA
 
Protein sequence
MEEKELLCKL KSRTNSEIAI KQCLTSSTPS LTVRSYCSLL FVLSLTECLV LCSILVCLIP 
MGLSVPSVGP QIAECQKVLE KSGLEYKLHG YGTNIEGPWD EVMKAIGDCH KAVHAMGTPR 
IAVCLDRYQD WYSNGQEYHL WRKRWESQAC RRDPRQRVIQ SINN