Gene CNF01380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF01380 
Symbol 
ID3258229 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp403361 
End bp405938 
Gene Length2578 bp 
Protein Length471 aa 
Translation table 
GC content47% 
IMG OID638257262 
Productdihydropyrimidinase, putative 
Protein accessionXP_571283 
Protein GI58268254 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTGC TCATTTTACC CCAATGGTAT CCATCCTTTT TTCTGCGTCC CTCATTACAA 
GAACTACCAT CACCCAACAA CATGTCTAAA CAGTTCGACC TCGTCGTGAA AAATGGCATC
GTAGTCACAT CCGGAGATAC TGGAAAGCTT GATATCGCCA TCAAGGACGG CAAAATCGCC
CATCTCGCTG CAAACATCTC AGAGGATCTT GCGGAAAAGG TCGTCGATGC CGAGTGAGTA
GATGAGGAAG TTGGTGCGAG AGATTCAACG GCTGAAACCT ACGCAGAGGG GGATATGTTA
TGCCCGGGGG CGTAGATGCG CACGTCCACC TTGCTCAGGA TTTCCCCAGT GGTACGTATT
CGCATTGCCT GATCTCCTGG TTGTTCTGGA TAACCATGAA CGTTGAGCTG ATATAGAACA
GGTCCCAGTG GGAGGCTGGG AAGATGTGCC GATGACTTTG AGACCGGCTC GCGTTCGGCG
ATCTGCGGAG GAACCACCAC CTTCATCTCG TTTGGTAATA AAAGCCTTTC AGTACTGAAT
ATTACGTAAT AGATACTCAT GTTTGTTTTG ATTCTATAGC TCAACAGAAC CGTTGGGAAG
AGTCTCTGCT CCAAGTCGTT GAGAACTACG ATGCTCGAGC GAAAGCCACG GGCAGCTACT
GCGACTATGG TGGGTTTTAA ATTAGATGTC TAGTACACAT ACAGAGTACT GATGGACGTC
CTCCTTGTTT CCTTTCTCCT GCTTGCATTG TAGCATACCA TGTCATCATC ACGAGACCCG
AATTAGAGAC ACTCAAAATT GAGCTTCCAG TAATCGTTGA AAAATGGGGC AGTAAGTTCG
CGATAAGGTT GGCCAATCAA AGCTGATAGA ATTCTCAGTC ACCTCTTGCA AACTCTTCAT
GACTTATGCT GCTTTACAGC TTCGAGATAA TGAACTCTTG GATGTTATGT ACGAAGCCCG
CAAGCTTGCG ATCACTACTG TAAGCAGAGG AAAAGAGCGT GAAATGCGGT GGCTGATATA
CGCTAACATC CAAGCAGATG ATTCACGCTG AAAATGGCGA CCTCATAAGC TGGCTGACAG
GTAGGTTTTG GATTCCTTGA GCACTTCAAC ACTGTGATTC TGTACTGACG CCGGTGCAGA
CAAACTGGAA GAGAGGGGAA TGGTAGAACC CGGCTATCAT GCAGAGTCTC GACCGCCTAT
CGTTGAGATG GAGGCGACCA GCCGAGCCAT AGTTCTCGCT GAGATGATTC AGAACCCGGT
CCTTTTTGTG CACGTCGGTT CAGCAGTACG TATAGCCTCA TGATTGGCGA GGTAAAAATT
CGCTTTTCGA GCTAATATGT CGGGCAGTCT GCAGCCGAGG TCATTCGAAA CGCACAAACC
CGTGGCTTCC CCGTTTTCGC TGAGACATGC CCGCAATACC TTCATCTCAC TTGGGAAGAC
CTGGTACGTA CTCCGTCATG CCGTTGTTAG ATAAGTGATT AACAAGTTAT ATAGAAAAAG
TTCCATTCCC CCCAGTGTTT CGAGAACTCC AAGATGATCT GTTCCCCTCC CCCAGGACCT
GATGACTCTG ATCAGGAAGC CCTATGGACG TATGTAGCTT CCGGCCAGCT ACCAATAGTA
TCTGCTAAGT CAATTGTAGC GGTCTGCGCA ACGGTACTTT CACTATCTAT TCTAGTGACC
ATTGCCCTTT CCGGTGAGCG TCATTTATGT GCCAATTATT ACCGTGACTC ATCCTCGTTA
GTTATGGAGA TATCGATGGC AAGGCTCTCG GTGTTGTACA GCATGAGGAG AGTATGCAGA
GCGTAACATG CCCAGTCGAT CAGGATCATG TACACGAAGT CATGCACGGA AAAAGCGGTC
ATTTTAAGTA TATCCCCAAT GGTAAGTGCT TGATTAATCG TAATAGATAA CAGAGTTGAC
CGTTCAGGCT GCCCGGGGAT TGAGACCAGA CTCCCTCTTT TATTCAATTA CGGTCTCAGT
GAAGGACGTA TCACGCCTGA GCGTTTTGTA GATCTGGTAT CCGCCGCACC TGCTAAGCTG
GTGATTTTTG CGCCGCGACA CTTTCTGAAC GTCAGGACTG ATGCTTTAAT GCTCGTAGTA
TGGATTATAT CCTCGAAAAG GTGCCCTCTT GCCTGGCCTT TCTGACGCTG ATCTTGTCAT
TTGGTGAGTG CTTGTTTTTT TCGTTTGTCC TTTATTCAAT TTCTGATCAT TAATTTTCGC
CGGCATATTG CAGGTATCCT GAAAATAAAA TGGTACCTTT CAGCCTCACC AATGATCATT
TACACCATGG TGCTGATTGT AGGTCAATAC GGTTCATTCA AACAAATGCT GACAAAAGGT
CAGACTCTCC GTATGAGGGC ATGATGTTCA ACAACTGGCC CCGTTACACT ATCATTCGAG
GCAAAATTGT CTGGGCTGAA GGAAAGCTTT GCGGCTCGCC GAAAGATGGA GAGTACTTGA
AACGACAGGC GAGTCAGCTT ACCATGTCGG CTGTTAAATC CATCGCGAAT GATAAACGAA
GAGTCGCTAC TTGGTTGTAT GACAACAATG GGAAGTAAAG AGTACAAGTA TCTATATT
 
Protein sequence
MRLLILPQWY PSFFLRPSLQ ELPSPNNMSK QFDLVVKNGI VVTSGDTGKL DIAIKDGKIA 
HLAANISEDL AEKVVDAEGG YVMPGGVDAH VPVGGWEDVP MTLRPARVRR SAEEPPPSSR
LNRWEESLLQ VVENYDARAK ATGSYCDYAY HVIITRPELE TLKIELPVIV EKWGITSCKL
FMTYAALQLR DNELLDVMYE ARKLAITTMI HAENGDLISW LTDKLEERGM VEPGYHAESR
PPIVEMEATS RAIVLAEMIQ NPVLFVHVGS ASAAEVIRNA QTRGFPVFAE TCPQYLHLTW
EDLKKFHSPQ CFENSKMICS PPPGPDDSDQ EALWTGLRNG TFTIYSSDHC PFRYGDIDGK
ALGVVQHEES MQSVTCPVDQ DHVHEVMHGK SGHFKYIPNG CPGIETRLPL LFNYGLSEGR
ITPERFVDLV SAAPAKLVIF APRHFLNVRT DALMLVVWII SSKRCPLAWP F