Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF00610 |
Symbol | |
ID | 3258280 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | + |
Start bp | 203607 |
End bp | 206217 |
Gene Length | 2611 bp |
Protein Length | 563 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257185 |
Product | alpha-glucosidase, putative |
Protein accession | XP_571239 |
Protein GI | 58268166 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.260556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGAAGTTGGA AGGTCTCATA GCAGCAAAAC CCATCACTAA TTCTCACATT CGCAACAGCT TTGAACAAAT CATACATCAT GGTCTGTGTT ATTTCCGGTA AGATGGACTT CTTTATTCCG TAAGAGCTCA GCCTTGAAGA GGAAGACTGA CCAACTAAAT AGACCCCGAC TGGTGGCGCC AGGCCGTCGT CTATCAAATC TATCCCCGTT CCTTCGCCGA CGCGAACGGT GATGGGATTG GAGACTTAAA AGGTATAACT GCTCGTGTGC CGTATTTGAA AGCATTAGGA GTGGATGCCA TTTGGCTCAG CCCTTTCTAT CCTTCCGCTT TGCGGGATGG CGGTTGTAAG TTTAGCACTC ATTTTTGATC ACTTGACGGT TCTGATAACC TTTCGATGTA GATGATGTGG CCGACTACAG GGATGTCGAC CCGAAGATCG GGACATTGGA AGAGTTTGAC GAAATGACCG CTGCTTTCCA AAAAGTCGGA ATCCGAGTCA TCGTCGATAT CGTCCCCAAC CATTCAAGCG ATGACCATGA ATGGTTCCAA GCTGCTTTGA AAGCGGGTAA GGGGTCACCA GAGAGGGAAA GGTACATTTT CAGAGATGGT AAGTTCCCGA AGGACGATGC ACCTTTTGCC GGATTGAGCT GATCTCACAT AACTTAGGTC TCGGACCCAA CAAAGATCAG CCTCCTACCG ACTGGATCTG TTCTTTCGGT GGATCTGCTT GGTCGCCTTC TGGAATGAAC GACGGTCAAT GGTATTTCCA CTGGTTTGAC TCCTCTCAAC CGGACTGGAA TTGGGAGAAC CCAGATGTCA AAGCAGATTT CCTGAAGACC TTGAAGTTTT GGGGTGATCG GGGAGTCTCA GGTTTCCGGA TTGACGTCGC CCACGGCCTT GCTAAAGACA TGAGCGAGCC CTTGCCTAAC TGGGAGCAGT TGACTAAATT GACTCATCAA AAGCTCACTA ACGGTAACTC CGAGTTGGAT CATCCCCTTC TCGACAGGAA GGAGGTACAC GATATCTACA GATCTTGGAG AGAAGTCTTC AACCAGTTCA ATCCCCCACT CATGTGAGTC TGGAATTGTG TTTTCTTTCT GGGCCGGTGA ACCATGGTTG ACAGTGATCT CTAGGGCTGT TGCTGAAGCC TGGGTTGCTC CAGACCAAAA GCCCCTCTAC GCTTCTTCTG AGGGTCTCGG CCAGACCTTC TCTTTCGATA TTCTTTTGTG CAACTTTGAT GCTGAGGAGT ACCGTCAATG CATTAAGAGT TCATTGGCAG GAAGCAAAAA GTCCGACTCA ACTACTACCT GGGTACTGTC CAATCATGAT GTGAGTCCTG CCGGCCCATC ATTGTGCCAA TCAGACCTTG CTGATCGATA TACCATTCAT GGTTCGTAGG TAATGCGACA TCCCACCCGA TTCGGTCTCC CCAACGTCCC GAATGCGAAC CATGCAATGA CTACGGACAC CTATAACAAG TTCCTTAAAA CCAAGTTGAC GGATCCCAAG GTTGATATTG AGCAAGGGTT GAGGAGAGCC AAAGCGGCTA CTCTCATGAT TCTTGCCTTG CCGGGATCCA CATACCTATA TCAGTGAGTC ATTTTCAGCC TTGAGGTTAC ATTGCAAAGG CTCATCTCAG GTTACAGGGG TGAAGAACTT GGCTTGCAAG AAGTCGTCGA AATTCCAGAC GAGGAACGAC AAGACCCTAT ATTCATCCGA ACAAAGGGAG AAGAAGTCGG TCGTGATGGC TGTCGAGTTC CTATTCCTTG GGTTGCCGAT GAAAAGAACT TTGGCTACGG TCCTGGCAAA CGTGCGCATC TCCCTCAGCC TGCGTGGTTC AAAGACTATG CGGTCGATGT AGAGGAAAAG GATGCCAACA GCGTATTAAG CCTTTACCGA CGGGCTTTAG GATTGAGAAA AGGGCTGCAA TCTGCAGAGG AGCTTGAATG GGTGGAGAAT CCTAACAAAG AAGTCCTGCA TTTCCGAAGG CCCGGTGGAT GGGAGGTAGT TGTCAACATC GGCAAAGATT CTGTTGATCT GCCCAAGGGT TCCGTTCTTA TTAGTTCATC TAATAACGCG CTCAAGGGTG GAAGCATTCC TGGGGAGACG ACTGTTTGGC TCAAGTCTGC GTAGAATCTC GTATAACTTA CTAGGCCGTT GTAATAGAAT TGAATTGTAA ATGCAGCCAA TGTCATGCAA AGTCTGAAAG GCATCGATGA ATAATTGATG GCTGGCGAGG TGAATAAGTC AGAATGAACT CCGGGAAATC GGCATCTCTT TTTTGGCACC GCGACCGTAG TCCATACAAC AGTATCAACA TCGCGGGAAG GTTTTATCAT ATCAGGAGAA AGGCCAAAAT CTTCAAGAAG AATCAAACCT ACAGTCTATG TCAAAAGAAG AAACTTTTGA GTTCCAAATC AAGCAGTTGC CCACACACCT ACCTACCTTC TCGGCCCCCT AAAAATGTCA TTTTCTTCTT TTTTCGTCGC TATGATGGTC TTACTACGCT CCGTAACATT CATTCCAAGA TTCGTCGTGT GCCTTCAGAG CTGCCAGCCA CGTCGGGTTC CTGCAATCGT GCGTGAAGTA GCATGCTGTT CTCTGTGCTT T
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Protein sequence | MVCVISDPDW WRQAVVYQIY PRSFADANGD GIGDLKGITA RVPYLKALGV DAIWLSPFYP SALRDGGYDV ADYRDVDPKI GTLEEFDEMT AAFQKVGIRV IVDIVPNHSS DDHEWFQAAL KAGKGSPERE RYIFRDGLGP NKDQPPTDWI CSFGGSAWSP SGMNDGQWYF HWFDSSQPDW NWENPDVKAD FLKTLKFWGD RGVSGFRIDV AHGLAKDMSE PLPNWEQLTK LTHQKLTNGN SELDHPLLDR KEVHDIYRSW REVFNQFNPP LMAVAEAWVA PDQKPLYASS EGLGQTFSFD ILLCNFDAEE YRQCIKSSLA GSKKSDSTTT WVLSNHDVMR HPTRFGLPNV PNANHAMTTD TYNKFLKTKL TDPKVDIEQG LRRAKAATLM ILALPGSTYL YQGEELGLQE VVEIPDEERQ DPIFIRTKGE EVGRDGCRVP IPWVADEKNF GYGPGKRAHL PQPAWFKDYA VDVEEKDANS VLSLYRRALG LRKGLQSAEE LEWVENPNKE VLHFRRPGGW EVVVNIGKDS VDLPKGSVLI SSSNNALKGG SIPGETTVWL KSA
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