| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00420 |
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| Symbol | |
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| ID | 3258508 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 153621 |
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| End bp | 156191 |
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| Gene Length | 2571 bp |
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| Protein Length | 764 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 638257165 |
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| Product | SLY1 protein, putative |
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| Protein accession | XP_571469 |
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| Protein GI | 58268626 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5158] Proteins involved in synaptic transmission and general secretion, Sec1 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.255006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCTC GACGGCATAC AGATGCGCAT GGCAGTCCTG GCTTCTCTCA TCTCCACCCC
GCGATGACCC GCCCCTCGCT GCTGAACGCA CAGACGCACG CGCTCCTCAC GCTGCTCAAC
CTCAACAACC CGCCGCCGGC AAACCCGGCG GCGGCCGGCC CGTTCCCCCG CCCGTCCTCC
CCCGGCGCCC CGTTCGACGA CGCCGCCCAG CCGCCCCTCG TGTGGAAGGT GCTGATCCTC
GACGACGCCA GCCAGGACGT GCTCGCCACC ACGCTGCGCG TCCAGGACCT CCGGGAGCAG
GGCGTCACTC TCCACATGTG AGTCCTCCGT CGCCACGCCG GCCGTGTTGC TCATGCACCC
ACAGGCAGCT GCACTCGGCG CGGCCGCCAC TCGCCGATGT GCCTGCCGTC TACTTTGTCT
CGCCGACGCT CTCCAACATC CGCCGCATCG CCGAAGACCT CAACCCGCCC TTATACGCCT
CCTACTACCT CGCCTTCACC TCTTCCCTGC CCCGCTCGTT GCTCGAGGAG CTCGCATCTC
TCATCTTGTC CAACGACCCT TCCGGACAGA CCGGCCAGCT CATCGCCAGC GTCACGGACC
AGTTTTTGGA CTTTGTCGTC CCCTCACCGA ATATGTTCTC CCTCTTGCCA AGGAGAGAGC
TCAGGCAGGA TGCCGACGGC GCGGCAGGGA AAGGAAAGAA GGGGAAGGAT GTCAGGGAGG
AATGGGTGGA AGGGCGGGGA AGTTACGTGG TTCTCAACGA CCCGAGAGCG ACAGAGGTTG
ATATTGAAGA AGAGGTTGGA CGTATTGCCA ACGGACTGTT CAGCGTGATC ACCACCATGA
GTATGTCGAC TAGATGCCAA CGGATGGATA AAGGCTGATT ATTTTGGCAG ACATGACGCC
TATCATCAGG TGTCCGCGAG GTAATGCGGC AGAGATGGTC GCTCGTCGTT TAGATGCCAA
GCTGCGCGAC CATATCGCAT CAACCTCTTC CCGCAATACA CGCGATGCAT ACACTGTCGA
TGCTCTCCAG CGTCCCCGTA AGTCGCCAAG GTAACATAAA TACTATTGCT GACGAACGTT
GAACTAATAG TCCTCGCGAT TATGGACCGA AACATTGACC TCATCCCCAT GCTCTCCCAC
TCTTGGACAT ACCAAGCTCT CGTGTCCGAC GTGCTCGACA TGAAACTCAA CAGAGTCACC
GTCTCTTCCC CCGAAAACGG TCGTCTCACA AAAAAATCTT ACGATATCGA TTCCAAAGAT
TTCTTCTGGG CCAAAAACGC GGGCAACCCT TTCCCAGCCG TGGCGGAAGA TATCGACACT
GATCTGAGCA AGTACAAGAC GGATGCGGCT GAAATCACGA GGTCAACAGG GATAAGCGAT
GTCAATGACG TTTCCCAAAT CGACTTTACA TCCAACACTG CAAACTTGAA AACCGCCATT
ACCGCTTTAC CCGAACTCAC CGCGCGCAAA CAGATTCTCG ATACGCACAT GAACATTGCC
ACCGCATTGT TACAATCCAT CAAAGAACGT GGACTGGACA ACTTGTTCCA AGTCGAGGAA
ACAGCGAGCA AACAGACAAA AGCTACCATC CTCTCCGTCC TGAACGGCGC TACCGACGAG
CCGGGGCAAA CTGCCTCCCC TTCCCCGCTC GACCAACTCC GCTTGGTCAT CATCTACTTT
CTCTCCACCC AAGATGGGGC GCTTTCAAAG GAGGATATGA AGGAGCTCGA GGGCGTGTTA
AAGGAGCACG GGGCGGATAC GCGCGCATTG GAATATGTGA AGAAAGTGAG GGATATTCAT
CGCATGTCCA CGTTGGCGGT CCAGCCGGCC GTGGCGGCCC AGAGTCAGTC GGGAGGTGGA
GGTGAATGGA CAAGAGGGTT CAGTGCGCTT GGTAACCGTG TAAGTCTTTC CCTTCACTCT
GCCCTGCATC CACACTCATC AGATCATTAT TTTTTCAACA TAGATCACGG ATAGATTAAG
AGAAGGCGGT ATCCCAACCG TAGGGCTCGA CAACCTCATC TCTGGCGTCA AATCCTTCCT
CCCCGCACGG AAAGACCTCA CCCTAACCCG GCTGGTGGAA GCGCTCATGG ATCCGGCATC
GGCGTCTAGT CAAGCATTGC AGGATACGGA TGATTACCTG TTCTTCGATC CGAAAACGTC
TCGCGCGAGA CCCGGTCATG CAGGTGGTGG TGGCGGTGGA GGTGGTGGCG GTGCCGGTGC
CGGTGGCGGG GGAGCAGGCG GACCAGGGGG AGGAAGAAGT CAGTTTAGTG AAGGGTTGGT
GTTCGTAGTA GGAGGAGGAG GTTATGTCGA GTATGGCAAT CTGATGGATT GGGCGAATAG
GTCGGGAGGC GGTGGGAGAG ATGGCGGCGG CGGTGGAGCA GGTGCCGGCG GAGGAGCGGG
GGCGCAAGGG GTAACGGGAC AAGGAGGAAG GAAAGTGACG TATGGCAGTA CGGAGATTTT
GAATCCCGAA AAGTTTTTAA AGAGTCTGGA AGAGCTGGGG AGTGTCTAGC TGTAGGATTT
TTATGGAGTT CTTAGATGGG GACCATTGAT GGATGTGCAT GAATAAAAAA T
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| Protein sequence | MPPRRHTDAH GSPGFSHLHP AMTRPSLLNA QTHALLTLLN LNNPPPANPA AAGPFPRPSS
PGAPFDDAAQ PPLVWKVLIL DDASQDVLAT TLRVQDLREQ GVTLHMQLHS ARPPLADVPA
VYFVSPTLSN IRRIAEDLNP PLYASYYLAF TSSLPRSLLE ELASLILSND PSGQTGQLIA
SVTDQFLDFV VPSPNMFSLL PRRELRQDAD GAAGKGKKGK DVREEWVEGR GSYVVLNDPR
ATEVDIEEEV GRIANGLFSV ITTMNMTPII RCPRGNAAEM VARRLDAKLR DHIASTSSRN
TRDAYTVDAL QRPLLAIMDR NIDLIPMLSH SWTYQALVSD VLDMKLNRVT VSSPENGRLT
KKSYDIDSKD FFWAKNAGNP FPAVAEDIDT DLSKYKTDAA EITRSTGISD VNDVSQIDFT
SNTANLKTAI TALPELTARK QILDTHMNIA TALLQSIKER GLDNLFQVEE TASKQTKATI
LSVLNGATDE PGQTASPSPL DQLRLVIIYF LSTQDGALSK EDMKELEGVL KEHGADTRAL
EYVKKVRDIH RMSTLAVQPA VAAQSQSGGG GEWTRGFSAL GNRITDRLRE GGIPTVGLDN
LISGVKSFLP ARKDLTLTRL VEALMDPASA SSQALQDTDD YLFFDPKTSR ARPGHAGGGG
GGGGGGAGAG GGGAGGPGGG RSQFSEGLVF VVGGGGYVEY GNLMDWANRS GGGGRDGGGG
GAGAGGGAGA QGVTGQGGRK VTYGSTEILN PEKFLKSLEE LGSV
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