Gene CNE02160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE02160 
Symbol 
ID3257503 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand- 
Start bp584863 
End bp585908 
Gene Length1046 bp 
Protein Length193 aa 
Translation table 
GC content53% 
IMG OID638256807 
Producthypothetical protein 
Protein accessionXP_570885 
Protein GI58267458 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCCACTCTC TATAGATGAC CTGGTGAGTG AATCTGGCAA GCGGCGCCAT GGATAGATGG 
GCAGGGACTG ATTGTTTTCG ACAGCGCGCC CAGGAAGCAG TCCAAGACCT ACAAGGTCCC 
TAAGAGGCCC TACGAGGCTG CCCGTCTCGA CGCCGAGCTC AAGGTGGGTC GGAATTAAGC 
AAGAACGGCA GGGATTTGAG AATGACAATG GAGAGAATCG AATGGAGTTG GGAAGTTTTT 
GGAGGAAGGA GATGAAACAT GGCCTTCCCT GCCGTTCTTG GGTGTGGAAT GATTCGACGG 
CTCTAACTTG AATTGTAGCT TGCGGGCGAG TACGGTCTCC GTAACAAGCG AGAGATCTGG 
CGTATCCAGC TCACCCTCTC CAAGGTTGGT CACTCGGGCA AAGTTTTCAT CGACATCTGC 
TGACATACCA ATAGATCCGA CGTGCTGCCC GAGAGCTCCT CAAGCTCGAC GACAAGGACC 
CCAAGCGACT CTTCGAGGGT AACGCTTTGA TCCGTCGTCT TGTTCGAATT GGTGTGCTCG 
ACGACACTCG CATGCGTCTC GATTACGTCT TGGCCCTCAA GACTGAGGAC TTCCTCGAGA 
GGCGTTTGCA GACCCAGGTA TTCAAGCTTG GGTACGTTTC AGACCGCATA TAAAGTTGCT 
ATAGGAGTGT CTGACTTTCC GCAGTCTCGC CAAGTCCGTT CACCACGCTC GTGTTCTCAT 
CAGGCAAAGG CACATCCGAG TTGGCAAGCA GATCGTCAAC GTTCCTTCTT TCGTTGTCCG 
ACTCGACTCC CAGAAGTATG TGTCCCCATC TTCTTTTATT TCACTCCTTT TCTAACAAGG 
ATTTGTAGGC ACATCGACTA CGCTCTCACC TCTCCTTACG GTGGTGGCCG ACCCGGTCGT 
GTTAAGAGGA AGAGGGCTAA GGCGGCCGCT GGTGGTGGTG ACGACGCCGA GGAGGAGGAC 
GAGGAGTAAA CTCGACGTCG CTAGGACTGA AAGTTTTACT TGGGCTTGTA AGATGGCGGT 
CAGGGATGCA TCGCTTTCAT GATTCA
 
Protein sequence
MTCAPRKQSK TYKVPKRPYE AARLDAELKL AGEYGLRNKR EIWRIQLTLS KIRRAARELL 
KLDDKDPKRL FEGNALIRRL VRIGVLDDTR MRLDYVLALK TEDFLERRLQ TQVFKLGLAK 
SVHHARVLIR QRHIRVGKQI VNVPSFVVRL DSQKHIDYAL TSPYGGGRPG RVKRKRAKAA 
AGGGDDAEEE DEE