Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND06010 |
Symbol | |
ID | 3256949 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 1654211 |
End bp | 1660157 |
Gene Length | 5947 bp |
Protein Length | 1765 aa |
Translation table | |
GC content | 50% |
IMG OID | 638256540 |
Product | conserved hypothetical protein |
Protein accession | XP_570489 |
Protein GI | 58266666 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.416576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGCCA TGGATGACAG ACGGTACTCT TATCCCCCAC CTCGAACATC TTATGTGCAG CCTTCAACGC ATCCTTCCCC AACTGCATCC GATTATAGAT ATCGATCCCC CGTCTTACCT CAACATCCTC CGACCCATCA CTCACCTTCG TCGTATTCTG CTTCACTTTA TGGTCAACCA AAGGAAGATC CTGCTATTGC CTACGCTCGT ATGCGGGAAG AAATGAGAAC CGCAGAAGAG GCTAGGCGTG AGGCAGAGGC ACTCGAATAC AGGCGAAAGC GCGATATGGA GTTTGCAGCC AGGCGTCCTG GGTCCGAGCT GATGGATGAC CCGCGCAGGA TACCGCATTC CTCGTTTCCT CGGTCTCAAA TGTATGGGCC GTCTGCAGAC CAATCTAGAG TCATGCCGAG TAGGAATGGC AAAGACTATA TCAGTGAACC GCCTTCTCCT AGCGAATTGT ACCCGACGGA TGAAGACACC GAAAGACTGC CTATCGATCG CTACAGACGG GATATTGATG TCCCACCATT GCCACGACAG TTACCCCCAC CGCCTTCAGA AATAGGCCGT ATGGCTGACA GGGCTCGGTC TCCTTCCGCG CCCATTGCAC CTCCGCTTTT GAAAGTCGTG CGGAAGCGTA CAAAAGTTAT CCGACCCAAT GACTTTCTTG TGGGTAATGA GGATGTATGG GAGGATGGCT TGATCAGGTA TCAAAGTAAG CGGGAAGATG AGGTCCGTGC GATTGCACAA TGGGCTGCTT CGTGTCAGGT ATGTGTTTTC TTTATTGCAA TATGAACTTT GACTAATATT TGTACTAGGT AAGAAATGGT GTGGGAGAGC CTTCTCTTCC CCAAACGCAG GATGAATCCA TCAAAGTTCG TAAAATCAAT GGTGACATTG CAACACCGAC CAACAAGAAG AAACGCAAGT CTCGCAAGCT CAATCTTGAT GATGAACTGC TGGGTCTGGC TTCGTCTCCT CCTGGCTCAC CGAATGCTGC CGCCGAAGCC GAGAAATCTG AGAGCAAGCA TCATATCTAC GGTATGAACG GTCCTATCGA TCCTGCAAAC CCTCCTTCCC CGTCTACTAT CGTCTATCCT TCCGGTCTCA CTCGGGCAGA AGTCATTGCA AAATGCGAAG CTGGGGATGT CGAAGGCTTG ACTGAAGATG ACGTCAAGGC TGTCCAGGAT GAGATGTGGA TGCGCGAGAA AGCTGCTCAG GCTGCCGAGA ATGGCGGAGT CCTTCCTACG AACAAGGATG GGACTGTTCG TCGAAAGCCT GGTCCAGCCA AGGGTTGGAG GAAGATTCGA GGCATTGATA AGAAGAAGGA GACAACACCT GGCAAAGCTC AGTCGACCAC TGCCGGTAGT GTTGCAGGTA GTGTGGCCGA CGAAGAGGCT GAAGCGGACA TAGCTGCTCT CTTGGATGAT TCAATTGCAA AGAAGGGTAA AAAGGTTAAG CGTCGTAAGC TGGAAGAGCC CGGTGCCGAG TCTCCAAGAT TCGCTGACGC TGAAGATGAA TATAATGAAC ATCGACCTTC TGACTCGGTG TTACTTGACG AGATTGAGGA TGAGCATAGT CGAGCAGGCA GCGTGGGTGA GAGCAACGCC TTGGATACCT TACCTGCCGC CTCTGCACCT CCAAAGAAGA AGAATAGCAA GACAAAAGAA CCCGGTGTGG GTAAAGGTCG GTGGACGCGA CCTACCAAAC CTGAAAAGGA GTTGGTCAAG AAAGCCGAGG CTCTCGCTTC TCGCACCAGC AAAGCATCCC TCGCTGGGCC TTCTGACGAT ACTTTCGGCG TTGGTCCAGG CCCGGCAGAG GAAGTTCAAG AAGAAATCAA GCACGAGTAT GCGCCTAACA CGCATGACCC GCGAGGAGTG TCGGAGAACG AGGCGAAGAT CAGGCATGAA TTGGTGGAGG ATCTCCAGAA GCAGGCTTGG AGCAACATAG TTCGGGATGT GCCTAGGGTA AGTGCAAATT CCCGGATATG GTTTGTTGAA TGATCAACTA ATGTTAGTGT AGATATATCG AGTTTTTCAG GGTTATGATC AGTCAATGAA GCAAATTGCT CAGCGACGTG CTCAGGCCTG CGTTCGTAAT GCCTTCGGGC AGAGAAACCA AAAGACGATG CAGAGGCAGA GTGGTAAAGT TAACAAGGAG GGTGCTGCAA AGGCGAAGCG AATTGTCAAG GAGGTAAGTC ATCCGCCCAT TCGCCGAATA GTCCAGCCCA GATCTCATCA TTGACCATCC TTGCAGCTTG CGGCATTTTG GAGGAAAAAC GAAAAAGATG AAGTTATTGC GCGTAAAAAG GCTGAACGTG AAGCTCTTGA GCGTGCCAAG GCTGAAGAAG AAGCTCGAGA AACCAAGCGT CAATCTCGCA AACTCAACTT TCTTCTCACC CAAACTGAAC TCTACTCGCA TTTCATCGGA AAGAAGATTA AGACCAAGGA AGCCGAAGCT GCGGAGGGCA TGGATGTGGA AGAGGAGGAG AAGAGGGGGA TGGAAGAGAT TGCCATTGGG GAAGACGGCG AGCCTTTGCC AGATCTTGAT TACGATGAAG GTGAGTGATG TCTTTCGTAT AATAAGTGGA TGTGGCTAAT ACCTATGGTA GATGACGAGG AGAACCTCCG GAAACATGCG GCAAGGGGTG CGCAGGCAGC TATTCAGGCA GCTAGAGATA AGGCGAGAGC GTTTGACGAT TCTATCGTTG GTAGAGGTGC GCCCCTACCT GGGGACGATA CTAGTACGTA TCGCCCATTT TCCGTCATTG GGGACTCTTT TAACGGTAAT GCAGTGGATG GCGATGAGCT CAATTTCCAG AACCCATCTC TCGGCGAGAA CAGTGTCACC ATAACCCAAC CCAAGATGCT TATGGCTCAG TTGAAGGAAT ACCAGCTCAA GGGTTTGACG TGGTTAGGGA ACTTGTATGA GCAAGGTATC AATGGTATCT TGGCTGATGA AATGGGTTTG GGTAAAGTGA GTAGCCTGAG TGATCTTAGG CCAAAGGGCT TTAAGCTGAC ATTGTTACGT TAAGACCATA CAATCTATCT CCCTTCTTGC GTATCTCGCC GAACACCATA ATCTTTGGGG TCCCTTCCTC GTCATTGCCC CCGCATCAAC TCTTCACAAC TGGCAGCAAG AACTCGCGCG ATTCGTCCCC AGGCTCAAGG CTCTACCGTA CTGGGGTTCA CCTAAGGATC GTGAGACGCT GAGAAAAATT TGGAGTAGGA AGAATCAGAC GTTTAGCGAA GACTCGCCTT TCCATATTTT GATTACTTCT TACCAACTGG TGAGTTTTCG TACCGTAACT GAAACATGGG AGTAATGTTG ACGGAACAAT TAGGCTGTAC AAGATGAGAA GTATCTCCAA GGTATGAAAT GGCAGTACAT GATTCTTGAT GAAGCCCAGG CCATCAAGTC TTCTTCCTCG GCTAGATGGA AGTCTCTTTT GAGTCTGCAT TGTAGGAACA GGTTGTTGTT GACTGGAACA CCTATTCAAA ACTCAATGCA CGGTGAGTCA TCTTCCGGAA AGGATAGAAA TGCAGCGCAT GCTGACTGTA GTGCAGAACT CTGGGCCCTT CTGCACTTTA TCATGCCTCA GCTTTTTGAT TCGCACGAAG AGTTCGCCGA ATGGTTCTCC AAGGATATCG AGAGTTCGTC AGGTGGTGTC ACTGGTAACC TCAAACCTGA ACAGCTGAAG AGGTTGCATA TGATCTTGAA GCCGTTCATG TTGCGAAGAG TGAAGAAACA TGTGCAAAAG GAGTTGGGTG ACAAGGTACG TCCCTATCAA TCCCCCTGGT TAATGTCCCA GTGGCTGATG AAGATGTAGA TTGAAATCGA CTTGCTTGTC GACTTGAGTC AACGACAACG CGAGATCTAT AAAGCCCTCC GGCAACGTGT CTCTATCACT GACCTTTTGG CGACTGCCGA AAACAACACG GACAATGGCA ATCCCAAGAA CATGCGTTCA TTGGTCAACC TCGTCATGCA GTTCCGAAAA GTGTGTAATC ACCCCGATCT TTTCGAACGG GCGGACGTTG TTTCACCTTT TGTTTTTGGC GAGTTCTCAC AATCAGGAAA TCTTGCTAGG GAAGGAGATG GCATGTACTT GCCCGACTCG GCAAGGAACG CGATCGAAGT GCAAATACCG CGAATATTAT GGACAGATGG CGGCAAATTG GATATTCCTG GAGAACAGAG TCTCGCAGGC AGCGATACGA AGATTTTGCA AAATCTCTTA AACATCTGGA CTCCTGAATG GATAAATGAG CGTACCAAGT GCGCCGACGC CGAATTCGGT TTTGTCAAAT TAGTTGGTTC TTCGCCTGGA GAAACGAGCA GGAGCGCCAA GTCGCCTGTT CTCGTGCAGC TACTTGAGGG AGCTGAGAAA GAAAGGCGAT GGACAGAGGA GGGAAGGTTC GTCGATGATT CCGAGTTTGC AGCTTCTGTC AAGAAGGGGT TCAGGGTACC TTCAGTCATT CCAGTCTTAA CACAGCCTGG ACAAGTGTCT CTTCGAGAGA TCAGCCGGAG AGTGTGGGAT GAGTCGTATC TTTCACGCGA CGATGCGAGG TGTATTGGTG ACTACGCCAT TGCGCCTATT GTCAAACCTA TTGCATCTAA CCGATCATTT CTCAATGCTC AAGACCGCAT CCTCAATCAG CCTCTCGCTC ACTCTACCCT CTATGGCCTT GCCCCTTCAG AGCTTCATGA TCCCTTGGCT GCCGAACAAT TTTCTCGCAT TGCCCCCAGC GTGCCTCTTA CAGGTCTCAT CCCATCATCC GCATCCTCTC AAACACCCGT CTCACCTCTT CATATTCCTC CCACAAAGCG TCTCATCGTT GACTCTGCCA AGCTTGCTCG TCTTGATTCG CTTCTTCGTG AACTCAAGGC CGGTGGTCAT CGGGTCCTTC TTTATTTCCA AATGACAAAG ATGATGGACT TAATTGAAGA ATACCTCATC TTCAGGCAGT ACAAGTACTT GAGACTGGAT GGTTCGTCCC CGATCGCGGA GAGAAGAGAT ATGGTGACCA GTTGGCAGAC GAATCCAGAT ATCTTTGTGT TCTGTCTGAG TACCAGGGCC GGTGGTTTAG GTATCAACTT AACCGCTGCG GACACTGTAA TTTTCTGTAA GTTTAGATTG GCCAGTGGTT ACTGAAAAAA ATACTGATTG TAAACAGACG ATCATGACTG GAACCCCTCG AGTGATGCCC AAGCCATGGA CCGAGCTCAC CGAGTTGGTC AAACCAAACA GGTCACTGTT TACCGTCTCG TGGCGTACGT CGCTTTGGTT CTAATCATAG TAGGATCGGT GCTAACACTC TATTTAGTCG TGGCACGATC GAAGAACGTA TCCTTCAAAT GGCCCGAGGC AAGAAGGACA TCCAGGATGT TGTCGTCGGC ACCAAATCTG TTTCTGACGT CGCCAAACCA TCTGAGATCG TATCCTTGTT TATGGATGAT GAAGAGCTGG CCGAGTCTGT TGCCAAGCGC AAGCAAGCAG AAGCTCACGG TTATATTGCT CCTACCATTA TTCCCAACGG CCGCAGGTCA CAGTTTGGAG ACGGTCTGGT ATTGGATGAT GGTGAGGGCG ATGATGGATT CTTCAACGCC GCGGCGGCGG CGAGAGCGAA TGCGGAAGAA GAGGAAGGTT TAGGTGCGGA GGAGGAGAGC AAAGGGAAAG GGAAGGCGAA AGCGGCTGCA GCGGTAACAT TTCCGGTACC GGGCGAAAAA AGGAGTCATA AGAAGGGTAT GGGAAAGAAG GCTCAGGCTG CAGCTGCTGC CGCCGCTTTG GAAAGAGTGA TCGCGGGCAA CGAAGGTGAG CTAATCTTTC AGTAGATAAA AAGAGCACAT GCTAACACAG CATTTTGTAG AACCTCTTGC AGCGTCAAAG CCCCCAGCTA AGAAAAAGGT CAAGATTGCC CTTGGACCTG ACGGCTTACC ACTGTAA
|
Protein sequence | MGAMDDRRYS YPPPRTSYVQ PSTHPSPTAS DYRYRSPVLP QHPPTHHSPS SYSASLYGQP KEDPAIAYAR MREEMRTAEE ARREAEALEY RRKRDMEFAA RRPGSELMDD PRRIPHSSFP RSQMYGPSAD QSRVMPSRNG KDYISEPPSP SELYPTDEDT ERLPIDRYRR DIDVPPLPRQ LPPPPSEIGR MADRARSPSA PIAPPLLKVV RKRTKVIRPN DFLVGNEDVW EDGLIRYQSK REDEVRAIAQ WAASCQVRNG VGEPSLPQTQ DESIKVRKIN GDIATPTNKK KRKSRKLNLD DELLGLASSP PGSPNAAAEA EKSESKHHIY GMNGPIDPAN PPSPSTIVYP SGLTRAEVIA KCEAGDVEGL TEDDVKAVQD EMWMREKAAQ AAENGGVLPT NKDGTVRRKP GPAKGWRKIR GIDKKKETTP GKAQSTTAGS VAGSVADEEA EADIAALLDD SIAKKGKKVK RRKLEEPGAE SPRFADAEDE YNEHRPSDSV LLDEIEDEHS RAGSVGESNA LDTLPAASAP PKKKNSKTKE PGVGKGRWTR PTKPEKELVK KAEALASRTS KASLAGPSDD TFGVGPGPAE EVQEEIKHEY APNTHDPRGV SENEAKIRHE LVEDLQKQAW SNIVRDVPRI YRVFQGYDQS MKQIAQRRAQ ACVRNAFGQR NQKTMQRQSG KVNKEGAAKA KRIVKELAAF WRKNEKDEVI ARKKAEREAL ERAKAEEEAR ETKRQSRKLN FLLTQTELYS HFIGKKIKTK EAEAAEGMDV EEEEKRGMEE IAIGEDGEPL PDLDYDEDDE ENLRKHAARG AQAAIQAARD KARAFDDSIV GRGAPLPGDD TMDGDELNFQ NPSLGENSVT ITQPKMLMAQ LKEYQLKGLT WLGNLYEQGI NGILADEMGL GKTIQSISLL AYLAEHHNLW GPFLVIAPAS TLHNWQQELA RFVPRLKALP YWGSPKDRET LRKIWSRKNQ TFSEDSPFHI LITSYQLAVQ DEKYLQGMKW QYMILDEAQA IKSSSSARWK SLLSLHCRNR LLLTGTPIQN SMHELWALLH FIMPQLFDSH EEFAEWFSKD IESSSGGVTG NLKPEQLKRL HMILKPFMLR RVKKHVQKEL GDKIEIDLLV DLSQRQREIY KALRQRVSIT DLLATAENNT DNGNPKNMRS LVNLVMQFRK VCNHPDLFER ADVVSPFVFG EFSQSGNLAR EGDGMYLPDS ARNAIEVQIP RILWTDGGKL DIPGEQSLAG SDTKILQNLL NIWTPEWINE RTKCADAEFG FVKLVGSSPG ETSRSAKSPV LVQLLEGAEK ERRWTEEGRF VDDSEFAASV KKGFRVPSVI PVLTQPGQVS LREISRRVWD ESYLSRDDAR CIGDYAIAPI VKPIASNRSF LNAQDRILNQ PLAHSTLYGL APSELHDPLA AEQFSRIAPS VPLTGLIPSS ASSQTPVSPL HIPPTKRLIV DSAKLARLDS LLRELKAGGH RVLLYFQMTK MMDLIEEYLI FRQYKYLRLD GSSPIAERRD MVTSWQTNPD IFVFCLSTRA GGLGINLTAA DTVIFYDHDW NPSSDAQAMD RAHRVGQTKQ VTVYRLVARG TIEERILQMA RGKKDIQDVV VGTKSVSDVA KPSEIVSLFM DDEELAESVA KRKQAEAHGY IAPTIIPNGR RSQFGDGLVL DDGEGDDGFF NAAAAARANA EEEEGLGAEE ESKGKGKAKA AAAVTFPVPG EKRSHKKGMG KKAQAAAAAA ALERVIAGNE EPLAASKPPA KKKVKIALGP DGLPL
|
| |