Gene CND04930 details

Gene Information

• Locus tag: CND04930
• ID: 3256992
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 1351864
• End bp: 1353932
• Gene Length: 2069 bp
• Protein Length: 409 aa
• GC content: 44%
• IMG OID: 638256429
• Product: conserved hypothetical protein
• Protein accession: XP_570479
• Protein GI: 58266646
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0688] Phosphatidylserine decarboxylase
• TIGRFAM ID: [TIGR00163] phosphatidylserine decarboxylase precursor

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTGTAGCGT ACAAGTACAT TTATTCAGCA GACAGCCCTA TTTGCGATGG ACCCCATATC 
AGACCCTTCA ACTCAGGAAT CTCCTCATCC TGTCCAAGCT CTTCCTGAAG AGCTCGGCAA 
ACCACTCGAG GACTCGCTCG ACCATATCGT GTCCAATTCG AAAGCTGTTA GGGGCGCTCG 
GAAAGATCAG CTTGCTCGTA CGCAAACATC TAGTATACAT AAATGGCAGG AAAATTCTAA 
TATATTGTAA AGCAAGCGAG CTTAGATCGG ACGCCGTTCA TTCCCATGGT CCTGAGGCTA 
AACATTGGAT AGCAAAGTTC TTCCCCTCCG AGGAGACTTT AGATCATGTA CGTCCGATCG 
GATAGATATC GTCTGTATTA ATGTAGCTCT GATGCCCTTA ACGTACTTGT TCAGCTGTTT 
GCCATGGAGC ATATGGGTAA GCTTGTCTCC TTGTCCTCCT CCATTCCTAC CAACCTAACA 
TAGCATCTGT AGGCAATTAC GTGATCGATC GTATGACTGG GAAGAAATTC TTTGAAACAA 
TGCCGATCTG TAAGCCCCCA CAACCGCTAT ATGCTTACCC AAGCCGCACA TAATAACGAA 
AGGCAGATGT GCGCGTCGGT ATGCATCTCC TGTTTGTTTC AGGTGTGAGC CTTGTCCAGC 
ACGCAATACA AATACCTGGC ACTGCTAATT TCTCGTCTAG AACAGCTACA TGTCATACGC 
ATCTGTTGAA AAGCTTTTGC GAGAAAAGTC CATCAAGCGT GAGTTTGTGT CATAATCTAA 
TATGCAGTTT ATCTACGTAT ACTGAATACT AAGTAGAGGG GCAGACGTAT GATCAGACTG 
GACCCGACGT AGAGGAACAT ATAAGGTCAT TCATTAGAAC ATATGAATTG CCTCTTGACG 
AGCTTTTAGT GAAAGATTTG AGCCAGTACC CAGTAAGCTG TTTTGTACTC CGCGCGAGTG 
GTGATAACAA TTATCCCCAG ACATTCAACT CATTCTTTTC CCGTCGTCTG ATCGCCAGCG 
CCCGACCAAT CACCTCCGTG GGAGACCCAA CCATTATTGT CTCCGCTGCG GACTGTCGGT 
TGACAGTGTA CCAGACAGTC GACCAAGCTA AGAAGTTCTG GTATGTAACT TCAGTCTGAA 
AGGTGGTTTT GCTAGGCTAA ATTATGATCG ATAACGTGAT AAAGGATCAA GGGGCAGCAA 
TTCACGCTTC CGAACCTCTT GACTGGGAAG GATGTCGCAG ACATGACATT CAAAGCAGTA 
CAGGATGATC GTGAAGCCGC TCTCTCAATC CATAGGTTGG CCCCACAAGA TTATCATAGG 
TTCCATTCAC CCGTGGAAGG TATGATTGTT GCTATCAAAG ATATCGATGG TGCGTTTTCA 
ACTTGGTCAC TTGTGGAAGA AAGTTGATGG CGGATTATTC TAGGAGAACT GTACAGTAAG 
TCGGCTACAA TTTTTAGGCA AGTTTGCATG ACATGAACCC TATAAAACTA GCTGTGAATC 
CTCAAGCTAT CAATGAAGGT GTGTTCTGGT GGCCTTGCGC GCTTGACTCT TAGATGATTT 
GTTCATTTCA AATATTTAGA TCTCAATGTC TTCACTTTGA ACAAGCGTTC TATTATGCTT 
ATCCATGCCA ACCTTGGATC CGGTCGAGAA ACTGTTCCCA TTGCGTTTGT CGCTATAGGC 
GGTGCGTTCT CGTTCATATT GTTGTTATCC TCAGTATCCA TACTGAAACA TGATTTGCGG 
TATAGCAATG CTTGTGGGCT CCATCGGATG GTCCAAGAAA CCGGGTGATA AGGTCTGCAA 
AGGTGAAGAG CTAGGCTGGT TTCAGTATGG CGGATCCACT ACCATCACAG TCTTTCCAAA 
ATCAGCCGGA GTAGAATTTG ACAAGGATCT CGTTGAAAAT AGCAAGAAAC AGTTGGAGAC 
CTTTGTAAGG GTTGGAATGG AAATCGGAAA ATGTAGCACC GAGGTTAAAT AGAGAAATAA 
TAGTTCGAAT TAGATTAGAA TTAGGTTACA AGGCGTACAA CAATATCATA CAGATGTGTT 
AACTCTGCAA ACTATTTAGT ACCTGGTTT 

 

Protein sequence

MDPISDPSTQ ESPHPVQALP EELGKPLEDS LDHIVSNSKA VRGARKDQLA PSELRSDAVH 
SHGPEAKHWI AKFFPSEETL DHLFAMEHMG NYVIDRMTGK KFFETMPIYV RVGMHLLFVS 
GNSYMSYASV EKLLREKSIK QGQTYDQTGP DVEEHIRSFI RTYELPLDEL LVKDLSQYPT 
FNSFFSRRLI ASARPITSVG DPTIIVSAAD CRLTVYQTVD QAKKFWIKGQ QFTLPNLLTG 
KDVADMTFKA VQDDREAALS IHRLAPQDYH RFHSPVEGMI VAIKDIDGEL YTVNPQAINE 
DLNVFTLNKR SIMLIHANLG SGRETVPIAF VAIGAMLVGS IGWSKKPGDK VCKGEELGWF 
QYGGSTTITV FPKSAGVEFD KDLVENSKKQ LETFVRVGME IGKCSTEVK