Gene CND04600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND04600 
Symbol 
ID3257475 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand+ 
Start bp1268054 
End bp1269213 
Gene Length1160 bp 
Protein Length307 aa 
Translation table 
GC content49% 
IMG OID638256396 
Productribosomal protein, putative 
Protein accessionXP_570601 
Protein GI58266890 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCC CCATCGGCAC ACCGTTGAGG TCTCTTAGAC CATCTTCAGC AGCCAGATCT 
GGTGAGCACC ATCTCTCCCC TGTAAACCAG CACACACCTA ACTTTTTTAA CAGTCCGATC 
ATTTGCTTCA TCGGTTTCTG TCGCTCATAC AGCGGAGCCA TCATTGAGAC CCAGAAACGG 
ATCAGTTCTC CAAGGAGAGT CTCCCGAGGA CGCTTGGAAG AGAAATTTGC AAGAAGCGAG 
GCAATGGCGA CAACGTAAAG AGTATCAGCG TGAGTTATTT TCCAAGATTG GTACGACAGA 
AGATGTTAAA TTGGGGGCAT CAGGATCCAC TTTGTCAGTT TATATCCCGG AAGGCAGCAC 
TGCGATCCCT AAAGGCCGCT CTGCTCGCTC TCCTCATGAA GCTACTCTCT CTACTCTTCT 
GGCCTCGGGT GCCGCTCTTG GTCATGCTGC CAACATTACC TCGCATGCTT ACACTCCGTA 
CATCTATGGC AAGCGCGCCG GTCTTTCCAT TATCGACCTT GATCAAACTC TTCCTATCCT 
CCGTCGGACG GCAGCCCTTG TGAAGGATAT AGTCAAAGCT GATGGGGTAG TGTTGATCGT 
TGGCACAAGA CCAGGGCACC AAAAAATGAT TCAGAAAGCC AAGGAGAGAT TAGAAGACAA 
TGGCTTTGCT GTAGGGCAGT GGATTCCTGG TCTGTTGACA AACGCTGAGA CTTTGTGAGT 
ATATGGTCTC TATATCTTAT AGTCATTTTT CCTTACACCA GTGATAGCTT CGGCATGAAG 
CCACTGCTTG ACAAGTCTTA CAAGCCAGAT CTTGTCATCT TCCTCAATGC TTCTGAAAAT 
ACCCCTGCCA TTCGAGAATG CACTTCCCGG CATATACCTA CAGTTGGCAT TGTTGACACT 
GACACGGATC CAAGATTGGT CACCTACCCT ATTCCGGCCA ACATGGAGGT AAGATGCGCA 
ATGTTTAATG GCCCTGGTCC CTGTTGCTGA CCTATACCCA GAGTATGCGT ACGGCTGAGC 
TTATCATCAG CACGCTAAGT ATTGCTGGTC AGGAGGGAAG GCGATTGAGA TTAAAAGAGG 
CCGAGAGGAA AGCCTCTCAG GTGAGGGCCA GTAAAGGCCG TCGTGAGAGG AGATAGAAGT 
GCATAACATG TTACAAGTCA
 
Protein sequence
MSIPIGTPLR SLRPSSAARS VRSFASSVSV AHTAEPSLRP RNGSVLQGES PEDAWKRNLQ 
EARQWRQRKE YQRSTLSVYI PEGSTAIPKG RSARSPHEAT LSTLLASGAA LGHAANITSH 
AYTPYIYGKR AGLSIIDLDQ TLPILRRTAA LVKDIVKADG VVLIVGTRPG HQKMIQKAKE 
RLEDNGFAVG QWIPGLLTNA ETFFGMKPLL DKSYKPDLVI FLNASENTPA IRECTSRHIP 
TVGIVDTDTD PRLVTYPIPA NMESMRTAEL IISTLSIAGQ EGRRLRLKEA ERKASQVRAS 
KGRRERR