Gene CND03460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND03460 
Symbol 
ID3257374 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp936121 
End bp937291 
Gene Length1171 bp 
Protein Length190 aa 
Translation table 
GC content53% 
IMG OID638256279 
Productconserved hypothetical protein 
Protein accessionXP_570671 
Protein GI58267030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.595511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTCCATCAA AAACTGACAA AGTGAGTACT ATTTCACGGC GCATAACGGA CCCATTATTC 
CAGAAACAAT CAGGCGACCT TTCAATGGAG CAGAAGGAGG GACAGGCAGC AAGATAGGGC
GGACCAGATC GGATGTGGTT TGTGGACGCC GCAATGAAGC AGAGCCTGAA GAGGAAGTCG
AAGGGGTGGT TTAATGTAGA AGGCGGTTTA TGTGGCGATT GCGCGGATAT GTGGAAGATA
TGGAGGGCGA TGGAGGATAG TTCGCTGACA TTTTCGTTTC ACGCAATCCA TCAACTATTC
AATTTTTCGA CATATCTTAC TCGCACCAAT CGATATCTTC CGCATCGTTT TTATAGATGG
GTATCGACAT CCGCCGCCAC CACGTCAAGA AGGGCAACCG ATCTGCCCCC AAGTCTGAGG
ACCCCTATCT CCTCTTGCTT GTCAAGCTCT ACCGATTCTT GGCTAGGAGG ACTGACTCCA
AGTTCAACCG AGTTATCCTC AAGAGGTTGT TTATGAGCAA GGTGGGTTGT TAGGCAGTTC
GCTGGGACGA ATGAAGGCTG AGCCCTCGTT GTGAATAGAT CAACCGACCC CCCGTTTCTC
TCTCTCGAAT CGTCAAGGAG ACCAAGAACT CTAACCCCGA CAACTCCAAG ATCGTCGTCG
TCGTTGGCGC CATCCTCGAC GACGAGCGTC TCCCCGAGGT TCCCAAGCTC TCTATCGCCG
CTCTTCGATT CTCTACCGCT GCCCGGGAGC GTATCACCGC CGCCGGTGGT GAGGCCCTCA
CTCTTGACCA GCTTGCTCTC CGTGCCCCTA CTGGTTCCAA CACTGTCCTT CTCAGGGGTA
AGAGGAACGT CCGTGAGGCC GTTCAGCACT TCGGCGGTCC CCTCAAGGGT GGTAAGCCTT
ATGTTGCCAG CAAGGGCAGG AAGTTCGAGA TGGCCCGTGG TAGGAGAAAG GTTGGTGCGA
TCAACCCCGT ATACTAAAGC TTTACTGACG AGATATTGCG CTACAGTCCA GGGGTTTCAA
GATCAAGTCT ACTCACAAGT AAACTTTTCG CGGTCACAGG AGCTAGAGAA GTGTTCTGGG
CGCGAGTGGC ATACGTGGTG GATCTGGCAG ACGCAGCGCT ATCTGGTGCT GTTGGGATGT
TACGTTTTCC TCATGCACCA TATTCCGATT A
 
Protein sequence
MGIDIRRHHV KKGNRSAPKS EDPYLLLLVK LYRFLARRTD SKFNRVILKR LFMSKINRPP 
VSLSRIVKET KNSNPDNSKI VVVVGAILDD ERLPEVPKLS IAALRFSTAA RERITAAGGE
ALTLDQLALR APTGSNTVLL RGKRNVREAV QHFGGPLKGG KPYVASKGRK FEMARGRRKS
RGFKIKSTHK