Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND03460 |
Symbol | |
ID | 3257374 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 936121 |
End bp | 937291 |
Gene Length | 1171 bp |
Protein Length | 190 aa |
Translation table | |
GC content | 53% |
IMG OID | 638256279 |
Product | conserved hypothetical protein |
Protein accession | XP_570671 |
Protein GI | 58267030 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1727] Ribosomal protein L18E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.595511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTTCCATCAA AAACTGACAA AGTGAGTACT ATTTCACGGC GCATAACGGA CCCATTATTC CAGAAACAAT CAGGCGACCT TTCAATGGAG CAGAAGGAGG GACAGGCAGC AAGATAGGGC GGACCAGATC GGATGTGGTT TGTGGACGCC GCAATGAAGC AGAGCCTGAA GAGGAAGTCG AAGGGGTGGT TTAATGTAGA AGGCGGTTTA TGTGGCGATT GCGCGGATAT GTGGAAGATA TGGAGGGCGA TGGAGGATAG TTCGCTGACA TTTTCGTTTC ACGCAATCCA TCAACTATTC AATTTTTCGA CATATCTTAC TCGCACCAAT CGATATCTTC CGCATCGTTT TTATAGATGG GTATCGACAT CCGCCGCCAC CACGTCAAGA AGGGCAACCG ATCTGCCCCC AAGTCTGAGG ACCCCTATCT CCTCTTGCTT GTCAAGCTCT ACCGATTCTT GGCTAGGAGG ACTGACTCCA AGTTCAACCG AGTTATCCTC AAGAGGTTGT TTATGAGCAA GGTGGGTTGT TAGGCAGTTC GCTGGGACGA ATGAAGGCTG AGCCCTCGTT GTGAATAGAT CAACCGACCC CCCGTTTCTC TCTCTCGAAT CGTCAAGGAG ACCAAGAACT CTAACCCCGA CAACTCCAAG ATCGTCGTCG TCGTTGGCGC CATCCTCGAC GACGAGCGTC TCCCCGAGGT TCCCAAGCTC TCTATCGCCG CTCTTCGATT CTCTACCGCT GCCCGGGAGC GTATCACCGC CGCCGGTGGT GAGGCCCTCA CTCTTGACCA GCTTGCTCTC CGTGCCCCTA CTGGTTCCAA CACTGTCCTT CTCAGGGGTA AGAGGAACGT CCGTGAGGCC GTTCAGCACT TCGGCGGTCC CCTCAAGGGT GGTAAGCCTT ATGTTGCCAG CAAGGGCAGG AAGTTCGAGA TGGCCCGTGG TAGGAGAAAG GTTGGTGCGA TCAACCCCGT ATACTAAAGC TTTACTGACG AGATATTGCG CTACAGTCCA GGGGTTTCAA GATCAAGTCT ACTCACAAGT AAACTTTTCG CGGTCACAGG AGCTAGAGAA GTGTTCTGGG CGCGAGTGGC ATACGTGGTG GATCTGGCAG ACGCAGCGCT ATCTGGTGCT GTTGGGATGT TACGTTTTCC TCATGCACCA TATTCCGATT A
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Protein sequence | MGIDIRRHHV KKGNRSAPKS EDPYLLLLVK LYRFLARRTD SKFNRVILKR LFMSKINRPP VSLSRIVKET KNSNPDNSKI VVVVGAILDD ERLPEVPKLS IAALRFSTAA RERITAAGGE ALTLDQLALR APTGSNTVLL RGKRNVREAV QHFGGPLKGG KPYVASKGRK FEMARGRRKS RGFKIKSTHK
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