Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND01660 |
Symbol | |
ID | 3257218 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 448259 |
End bp | 449576 |
Gene Length | 1318 bp |
Protein Length | 289 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256101 |
Product | hypothetical protein |
Protein accession | XP_570276 |
Protein GI | 58266240 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGACATCTTT CCTCACTTAA TTCACTCATA ATGTCTCGCT CTTACGACCG AGGTAAGTAG GGGCCAAGCA GGGAATAAGG CTACATCTCT CTCTGGCATC CTGTCGAGCT CTAAACTCAG AAACATCGCT GACAGTGTTC CTTTAGCTCT TACTGTCTTT TCTCCTGACG GACATGTAAG TTTGTTAACG TGTCTGCGAT CCCAGAAGGT TCCGCTGATA GAACATATAG CTTTTCCAAG TAGAATACGC TCTTGAAGCC GTGCGACGAG GAACATGCGC CGTCAGTTAT CTTCAATCTC CCACTGTAAA CCAACAACTA ACCCCTGGCG ATTTCAGGTT GGTGTCCGTG GTAAATCATG TGTGGTCCTC GGTGTGGAGA AGAAATCAAC TCTTCAACTT CAAGATCCTC GAACGGTCCG AAAGGTTGCC ATGCTGGATG ATCATGTTTG CGTGGCTTTT GCTGGTAGGT CGGGTTGTTT TCAAAACCCT GGTTTAATAA TTAATGACGT CTGTAGGTCT TACTGCGGAT GGTCGTATCT TGATTGACAA GGCGAGAATT GAGTGTCAAT CACACCGACT GACTGTAGAG GACCCCGTCA GCATTGAATA CATCACCAAG CACATCGCTG GTATTCAACA GGTGCGCTGT TTGGTTTTGT TTCGCACATC TCGTCTGATT AGATTCCATA GCGATACACT CAATCAGGTG GTGTCCGACC ATTCGGTATA TCCGCTTTGA TTGTCGGGTT TGACCCACAT GACACTATTC CCCGACTGTA CTCTACCGAA CCAAGCGGTA TCTACTCTGC CTGGAAAGCT TGTTCTATCG GAAGAGCATC CAAGACTGTC AGGGAATTCT TAGAGAAGAA CTATGTGGAA GACCTTGAGA GAGAACAGGC AATTAAATTA ACAGTGAAGA GTCTGTTAGA AGTTGTGCAA ACTGGTGCGA AGAACATTGA GATTACTGTG ATGGAGTCAT ATGGTGTTGT TAAAGTGAGT ATTTATTCGA AGCGAACTTA GCTGGACTAA GCTGATATGA TAATAGGCCC TTGAGCAATC TGATATCGAA AAAATTGTCG CTGAGATTGA CGCTGAGAAG GAAGCTGAGG CCGAACGTAA ACGTCAACGT CTGGCTGCCA CACAAGCAGG GCAAGCATCT ATGGCCATGG GTTCTTCCGT GCCTTCTGGT ACAGAGACAC CGGCCGGCCG CCCTCAAGAA CATGCTTCAG CCCCTGGGGG TGACAGTGGG GTGCAATAGA TAGTTGATGT ATATGTAGGC TGGGGGGTAT AGCGGAATTA TGCATGATGT AGAATATG
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Protein sequence | MSRSYDRALT VFSPDGHLFQ VEYALEAVRR GTCAVGVRGK SCVVLGVEKK STLQLQDPRT VRKVAMLDDH VCVAFAGLTA DGRILIDKAR IECQSHRLTV EDPVSIEYIT KHIAGIQQRY TQSGGVRPFG ISALIVGFDP HDTIPRLYST EPSGIYSAWK ACSIGRASKT VREFLEKNYV EDLEREQAIK LTVKSLLEVV QTGAKNIEIT VMESYGVVKA LEQSDIEKIV AEIDAEKEAE AERKRQRLAA TQAGQASMAM GSSVPSGTET PAGRPQEHAS APGGDSGVQ
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