Gene CND01660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND01660 
Symbol 
ID3257218 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp448259 
End bp449576 
Gene Length1318 bp 
Protein Length289 aa 
Translation table 
GC content47% 
IMG OID638256101 
Producthypothetical protein 
Protein accessionXP_570276 
Protein GI58266240 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGACATCTTT CCTCACTTAA TTCACTCATA ATGTCTCGCT CTTACGACCG AGGTAAGTAG 
GGGCCAAGCA GGGAATAAGG CTACATCTCT CTCTGGCATC CTGTCGAGCT CTAAACTCAG
AAACATCGCT GACAGTGTTC CTTTAGCTCT TACTGTCTTT TCTCCTGACG GACATGTAAG
TTTGTTAACG TGTCTGCGAT CCCAGAAGGT TCCGCTGATA GAACATATAG CTTTTCCAAG
TAGAATACGC TCTTGAAGCC GTGCGACGAG GAACATGCGC CGTCAGTTAT CTTCAATCTC
CCACTGTAAA CCAACAACTA ACCCCTGGCG ATTTCAGGTT GGTGTCCGTG GTAAATCATG
TGTGGTCCTC GGTGTGGAGA AGAAATCAAC TCTTCAACTT CAAGATCCTC GAACGGTCCG
AAAGGTTGCC ATGCTGGATG ATCATGTTTG CGTGGCTTTT GCTGGTAGGT CGGGTTGTTT
TCAAAACCCT GGTTTAATAA TTAATGACGT CTGTAGGTCT TACTGCGGAT GGTCGTATCT
TGATTGACAA GGCGAGAATT GAGTGTCAAT CACACCGACT GACTGTAGAG GACCCCGTCA
GCATTGAATA CATCACCAAG CACATCGCTG GTATTCAACA GGTGCGCTGT TTGGTTTTGT
TTCGCACATC TCGTCTGATT AGATTCCATA GCGATACACT CAATCAGGTG GTGTCCGACC
ATTCGGTATA TCCGCTTTGA TTGTCGGGTT TGACCCACAT GACACTATTC CCCGACTGTA
CTCTACCGAA CCAAGCGGTA TCTACTCTGC CTGGAAAGCT TGTTCTATCG GAAGAGCATC
CAAGACTGTC AGGGAATTCT TAGAGAAGAA CTATGTGGAA GACCTTGAGA GAGAACAGGC
AATTAAATTA ACAGTGAAGA GTCTGTTAGA AGTTGTGCAA ACTGGTGCGA AGAACATTGA
GATTACTGTG ATGGAGTCAT ATGGTGTTGT TAAAGTGAGT ATTTATTCGA AGCGAACTTA
GCTGGACTAA GCTGATATGA TAATAGGCCC TTGAGCAATC TGATATCGAA AAAATTGTCG
CTGAGATTGA CGCTGAGAAG GAAGCTGAGG CCGAACGTAA ACGTCAACGT CTGGCTGCCA
CACAAGCAGG GCAAGCATCT ATGGCCATGG GTTCTTCCGT GCCTTCTGGT ACAGAGACAC
CGGCCGGCCG CCCTCAAGAA CATGCTTCAG CCCCTGGGGG TGACAGTGGG GTGCAATAGA
TAGTTGATGT ATATGTAGGC TGGGGGGTAT AGCGGAATTA TGCATGATGT AGAATATG
 
Protein sequence
MSRSYDRALT VFSPDGHLFQ VEYALEAVRR GTCAVGVRGK SCVVLGVEKK STLQLQDPRT 
VRKVAMLDDH VCVAFAGLTA DGRILIDKAR IECQSHRLTV EDPVSIEYIT KHIAGIQQRY
TQSGGVRPFG ISALIVGFDP HDTIPRLYST EPSGIYSAWK ACSIGRASKT VREFLEKNYV
EDLEREQAIK LTVKSLLEVV QTGAKNIEIT VMESYGVVKA LEQSDIEKIV AEIDAEKEAE
AERKRQRLAA TQAGQASMAM GSSVPSGTET PAGRPQEHAS APGGDSGVQ