Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00300 |
Symbol | |
ID | 3257308 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 89050 |
End bp | 91481 |
Gene Length | 2432 bp |
Protein Length | 625 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255967 |
Product | ATP-binding cassette (ABC) transporter, putative |
Protein accession | XP_570375 |
Protein GI | 58266438 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.681189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACCTGAAAA ACTCTTTTTT ACTTATAAAA ATGGCCCCCT CCGCATCCAA ACAGAAGCGA CTAGCAGAAA AGGCCGCCAA GGCCGCGAGC AAGACTGGCT CCTCCAAGTC CTCCGTCACT GGTGCCAGCA CCCCCCTCAC GAGCGTTTCC GACGACCCTA CTGATGCCGC GGAGCAGATG AAGAAGCTCA ACTTGGCTAC CGACAGGAGT GCTGTATGTC GAATGCTGTT TTCTGGGTGT AAAAATGGCG CTAATAATTT AATAGAGTGG TGTTTTGGTT TCCGATCCCA AGGGACGAGA CATCAAGATC GATCAGTATA TGCTTTCTTT CCACGGTCGA CTGTTGATTG AGGGTGCGGA GATTGCTCTT AACTACGGCC AGCGGTAAGT CGATTTCCTT TCGGGTATTT AATAGCGCTG AGGCATCGTA GGTACGGTCT TTTAGGTGAG AACGGTTCCG GAAAGTCCAC TTTCCTCCAA TCCATTGCCG ACCGAGACAT TGAGATTCCC GACCACATCG ACATCTATCT CGTCTCAGGC GCCGTCGACC CTTCCGATGT CAATGCCCTC GATTACATTG TTTCCTCCGC TAGAGAGAAG GTCGAGAGGC TCGAGAAGCT TGCAGAGGAC ATGTCTACCG CCGACGACGT TGACGAGCTT GCTCTCGACG CCATCTATGA GGAGCTCGAG GAAATGGACC CTTCGACGTT CGAGGCCAAG GCCGGTGCAA TCTTGAACGG TCTCGGTTTC TCTCAACAAA TGATGGCCAA GCCTACCAAG GACATGTCTG GTGGTTGGCG AATGCGGGTC GCTCTTGCCC GTGCTTTGTT CATTAAGCCT CACGTCTTGT TGTTGGACGA ACCTACGTCC CACTTGGATT TGGGTGCTGT CGTCTGGCTC GAAGCGTACC TTTCCACTTA CAACCACATC TTGATTTTGA CCTCTCACTC TGCCGACTTT ATGGACACTG TCTGTACCAA CATCATGGAC TTGACCACCA AGAAGAAGCT TGTCTACTAC GGTGGTAACT ACACCACTTA CGTTCGAACC AAGAGCGAAA ACGAGGTTAA CCAGATGAAG GCTTACGCCA AGCAACAGGA AGAAATCGCA CACATTAAGA GTGAGTCGAA TTTTGTGTAT ATCGGTATTT TACTGATAAT GTGACAGAGT TTATTGCTAG TGCTGGTACT TATGCCAACT TGGTCAAGCA GGCCAAGTCC AAGCAAAAGA TTATCGACAA GATGGAGGCT GCTGGTTTGA TTGAGAAGGT CGAGCAACCT CGTCAGCTTA GATTCAACTT TGAGGACGTC AAGAAGCTTC CTCCTCCTAT CATCGCCTTC TCAGACGTTG CTTTCTCTTA CTCTGGTAAG AAGGAGGACT ACTTGTATCA GGATTTGTCT TTCGGTATCG ACATGGACTC TAGAATCGCC ATTGTCGGTG ACAATGGTAC CGGTAAATCC ACCCTTCTTA ATCTTATCAC CGGCGCCCTC CAACCTGTCG AGGGTACCAT CAACAAGCAC ACTCAACTCA AGCTCGCCAA GTACTCTCAG CACTCTGCCG ATCAACTCCC TTACGACAAG TCTCCCGTCG AGCACATTGC TTCTCTCTAC AGCGAAAAGT TCCCCGACAA GGACATTCAG TTCTGGAGGC AGCAGATTGG TCGATTCGGT ATCACTGGTG CTCACCAGAC CAGCCCCATC AACCAGTTGT CTGATGGTTT GAGGAACCGA GTAGTGTTTG CTATCCTTGC CATGGAGCAC CCCCACATCA TCTTGCTCGA TGAGCCTACT AACCATTTGG ATATGGTGAG TTTCCCTTGG TCAGCTCTTT AGATTATTTA CTAATCATTT GAAAGGCTTC TATTGACGCT CTCGCCGCTG CTATCAAGGA GTTCGAGGGC GGTGTTGTGA TCGTCTCCCA CGACTTCCGT ACGCTTCTGC CCTTTTCGTA TACCAGTTTG ATGCTAACTT CCTATCTGCA GGACTTATCT CTCAAGTTGC CGAAGATCTT TGGGAAGTCA AAGACAAGAA GGTTATCAAC CTTACCAAGC AGGACATCTC CATCGTTGAC TACAAGAAGG CTCTTGCCAA GCGAAGTACG TCCCATTTTC TATGCAGCCT AATCAACTAT CGATTAACAA TACCCTCACA GGTCAAGCCC AGATTGAGAA GGCTAGACTC ATTTCCAAGA GTGCTACCAA GGGTGTTGCG TAAATCCTGT TCATATCCCA CAAAACTTTC CGTCCTCCGA TGCGTCCCTA CCACCTCGCC ATCTTTATTT CCGCGCCATA CCAATTCCTT TTGTCTTCTT CGAACGTCGA GATATATAGC ACTGTGTCAA CTAGTTTTAA AAGGCTACTT ACTTTTCCGT GAAGGCTTGT TCATTTTATC AAAAATAGAA AGCATCTGCA TGCTATACCC GTTAAAAAAA TT
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Protein sequence | MAPSASKQKR LAEKAAKAAS KTGSSKSSVT GASTPLTSVS DDPTDAAEQM KKLNLATDRS ASGVLVSDPK GRDIKIDQYM LSFHGRLLIE GAEIALNYGQ RYGLLGENGS GKSTFLQSIA DRDIEIPDHI DIYLVSGAVD PSDVNALDYI VSSAREKVER LEKLAEDMST ADDVDELALD AIYEELEEMD PSTFEAKAGA ILNGLGFSQQ MMAKPTKDMS GGWRMRVALA RALFIKPHVL LLDEPTSHLD LGAVVWLEAY LSTYNHILIL TSHSADFMDT VCTNIMDLTT KKKLVYYGGN YTTYVRTKSE NEVNQMKAYA KQQEEIAHIK KFIASAGTYA NLVKQAKSKQ KIIDKMEAAG LIEKVEQPRQ LRFNFEDVKK LPPPIIAFSD VAFSYSGKKE DYLYQDLSFG IDMDSRIAIV GDNGTGKSTL LNLITGALQP VEGTINKHTQ LKLAKYSQHS ADQLPYDKSP VEHIASLYSE KFPDKDIQFW RQQIGRFGIT GAHQTSPINQ LSDGLRNRVV FAILAMEHPH IILLDEPTNH LDMASIDALA AAIKEFEGGV VIVSHDFRLI SQVAEDLWEV KDKKVINLTK QDISIVDYKK ALAKRSQAQI EKARLISKSA TKGVA
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