| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05560 |
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| Symbol | |
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| ID | 3256333 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 1658517 |
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| End bp | 1660376 |
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| Gene Length | 1860 bp |
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| Protein Length | 479 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638255775 |
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| Product | ribosomal large subunit biogenesis-related protein, putative |
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| Protein accession | XP_569763 |
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| Protein GI | 58265214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCATCACTT GCTCACAAGA TACTTTGAGA TGGCCCCTAA ACGATCCGCT CCCACGCCCA
AATCCGGCGC TGCCGTTAAG AAGGCCAAGC CCGCCTCCAA AGGCGCTAAA CCAAAGTCTA
CCGACTCCCC TCTCGACACT GTCAAGAACG TTGCTTCCTC TGTCCTCAAC ACTGTCTCTG
ACGCTGTCGA CGTTGCTGGT GATCTCGTTC TCGACGATGG AGAGCCAGCT GCCGCTTCCG
AGGCCCTGGA AGAGACTGTC GATGTCCCTG CTTTGAAGAA GAAGGGCAAG GCTGCTAAAG
GCAAAGCTGG AGAAACCGCT GCTCAGGTCG CGGACAAGGT GCAGGAGAGC ACAAAGCCCA
TCAGGGGTAA AGCTGCCAAG GCTTTGAAGG ATGCTCAGGA GGTGGATGCG AAGGCTGTTG
CTGACAGGGC TACCAAGGCG GCCAAGGACA CTGCGGATGC TGTCGGAAAA GCTGCCAAGG
ACCCGGAGAA CAGGAAGAAG GCCGAGGATT TTATGGAGCA AGCTGAAAAC GCCATGAAGA
AGGTTGCGGA CAAGGTTGGA GAAGTCTTGG AAGATACTCT TGAACAGTTT GGCGAAGCGA
GCGGTATCAC TGAGGTCGCT GAAAACCTCT CCAAGAAGGG CAAAAAGCAA GCCGCGAAGA
AGGGCAAGGA GGTCGCTGAA AAGGCTGAGG ACGTCAAGGA GACTGGCAAA CGCAAGGCTC
AAAAAGTTGC TGAAGATGCT GAGCCCGTTT CTAAAAAGAC GCGATCCAAG ACCAAGAAGA
TTGTCGAGCC CGAGTCCGAA TCCGAACAGG AGCAGGACGA CGGGGACGAG GATGTCTACA
TTCACGGCTT TTCCTCTTCT GATGGCGAAG CCGATTCTTC CGACGATGAA TCTGATGCAG
AGGACCTTGC GGTAGCCGAA GCTGCTAGAA CCGTCGACAT GGGATCTTTA CCTATGGTCG
CCAAGGATGA CAAGTCTGTC CAGCAGAGGC TGAAAAAGGC TTCTAAGAAG AAGGCAGGTT
GAATCCCATG CTTCTTTTTT ATATTGGCTT GAATTGACAA TGCGATACAG GATGACAAGA
AGGGAACCCT TTACCTCGGC AGGATACCTC ACGGTTTCTA CGAAGACCAA ATGAAGGAGT
ACTTTTCTCA ATTTGGTGAC GTTACGCGAG TGCGATTGGC TCGTAACCGC AAGGCAAGTT
ATCTCTCTCA TTTGTTTGGC TGCCGCGGTT TGCTAACAGA TACAATCTAG ACTGGTGCTT
CAAAACACTA CGCTTACATC GAGATGTCAT CCGAGTCTGT TGCTGAGATT GTTGCCGACA
CCATGAACAA CTATCTTCTC ATGGGCCACC TCCTTAGATG TCACGTACGT TTTATCCTCT
ACCCCCCTCC CTATATATCC GTCTTACACA AAGCCCCCGC TGATTTTTTT TCCCCTTTCT
TTGTCGTGAA TAGGTCATTC CCTCAGACAA AGTTCACCCC CAACTTTGGG TGGGCGCCAA
CAAAAAGTTC CGTAAAGTGC CACGTGCTCG AATGGAGAAG ATGAAGCATG AAAAAGAACG
TACTGAAGAG GAAAAGTCCA AGGCGGACAA GAAATTGTTG AAGAAGGAGA GGCAGAGGAA
GAAGAAGTTG GAGGCTGCCG GTATCGATTA CGAGTTTGAC GGCCATGTAA GTTTCTGTTT
TCTGTTTCTG TTGTGGGAAC AGATTGGGCG TGAATGCTGA CCATTGTGAT GCATAACAAC
AGGCGTAACC CTGTGGTAGT GTTTGGATAT TGGATGTGAA GATATACCCA CAGTCGCCAT
GTAATGCGGA AATGTAACTA TTCTTGGTTT ACTTTTTCTC CGGCTTTAGA GAATAACAAT
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| Protein sequence | MAPKRSAPTP KSGAAVKKAK PASKGAKPKS TDSPLDTVKN VASSVLNTVS DAVDVAGDLV
LDDGEPAAAS EALEETVDVP ALKKKGKAAK GKAGETAAQV ADKVQESTKP IRGKAAKALK
DAQEVDAKAV ADRATKAAKD TADAVGKAAK DPENRKKAED FMEQAENAMK KVADKVGEVL
EDTLEQFGEA SGITEVAENL SKKGKKQAAK KGKEVAEKAE DVKETGKRKA QKVAEDAEPV
SKKTRSKTKK IVEPESESEQ EQDDGDEDVY IHGFSSSDGE ADSSDDESDA EDLAVAEAAR
TVDMGSLPMV AKDDKSVQQR LKKASKKKDD KKGTLYLGRI PHGFYEDQMK EYFSQFGDVT
RVRLARNRKT GASKHYAYIE MSSESVAEIV ADTMNNYLLM GHLLRCHVIP SDKVHPQLWV
GANKKFRKVP RARMEKMKHE KERTEEEKSK ADKKLLKKER QRKKKLEAAG IDYEFDGHA
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