Gene CNC05100 details

Gene Information

• Locus tag: CNC05100
• ID: 3256464
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 1532052
• End bp: 1532901
• Gene Length: 850 bp
• Protein Length: 123 aa
• GC content: 47%
• IMG OID: 638255728
• Product: RNA binding protein, putative
• Protein accession: XP_569809
• Protein GI: 58265306
• COG category: [R] General function prediction only
• COG ID: [COG0724] RNA-binding proteins (RRM domain)

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.247745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTATATTGCC AGAGTCAGAC TCTCTATACC CCAAGAAAGC TCCTATTCAA TTACACACGA 
AAAACGATCG AGTTCGCCTA CCAAATCTCT TTGTTGACCT CACTTAAAAC CTAATACACC 
TGTCACTATG GCCGACGTTG AAATGAACGG CAAGAGCAAG GACCTTTCTT GGGCCGCCAA 
GTGTGCGTAA TCTTGACGCT ACACCCAGCA TCTCTATGAA TTCAATAGGT GTTATTCGCT 
GACTTTGTTT TGTTGGTGAT AATAGCTGTC GAAGGATGGA ATATCTTTGT CACTGGGCTA 
CATGAAGAAG CTACCGAGGA GGACGTTCAG GATTTTTTTG CGGACTTTGG ATCTATAAAG 
CAGGTCAACA TGCCATTGAA CAGACGGACG GGTTACGTTA TGGTGGGTCT ATTCCATTGA 
AACGCCGCAT GGTTGTTTTG CATCCTGCGG CCATGACACC ATCAGGCGAA ATGAGCTTTT 
ACAAGTAGGC GGAAGGGTTG GCTGACATGA GTGAATACAG GGCTATGCCA TCATTGAATA 
TAATGACCGG GAAAATGCGG AGAGGGCAAT TGCGGAGGCC GATGGCACCA CCTTCCTTGA 
ACAAACAATC CACGTGTGCG TAACTTCGCC GTGCTGGTTT TGCATAAGTT TGTGCAGACT 
AACGGAGATA ACAGCACCTT TGCATTCGCC AAGGCTCCTC AAGGAGGTGC TCAACGGAGA 
GAAGGCAAGG CACGAGAGTT GTCACCAACC AGAAGATAAC AGGTGGATTG CTACATTGAT 
GGAGGATCGG GCAATGTGTA GACTTACAGG AAAGAAGCAG CTATAACTCA TGCATCATTG 
TAACAGCAGA 

 

Protein sequence

MADVEMNGKS KDLSWAAKSV EGWNIFVTGL HEEATEEDVQ DFFADFGSIK QVNMPLNRRT 
GYVMGYAIIE YNDRENAERA IAEADGTTFL EQTIHVTFAF AKAPQGGAQR REGKARELSP 
TRR