Gene CNC03990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC03990 
Symbol 
ID3256675 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1240674 
End bp1242139 
Gene Length1466 bp 
Protein Length359 aa 
Translation table 
GC content50% 
IMG OID638255620 
Productconserved hypothetical protein 
Protein accessionXP_569634 
Protein GI58264956 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTCTCTTCT TTTTGTACAA TATTTGATAA CATAACTCTG CTTCATATCA CGACTGCTTA 
TATCATCCCG ACATGCCTGC CGCTACTATT AGCCCTAAGA CCTTGCCTCC TGGCGTTTAT
TGTCCTACTA TCACCTTTTT CGAACCTACT GCCGAGCAGA ATTTGGATGT CGAGACTCAT
GTGAAGCACA TGGAGTTCCT CGCAAAATCT GGATTAGCTG GTGTCGTCGT CCAAGGATCG
ACTGCGGAGG CTGTAACTCT GGACGACGAA GAGAGAAAGA CTGTGCGTAT TAAGACAATG
GTCCCACCAT GATCCCACTG ACCTTCCAGA CAGCTTATCA GAACTGCGAA AGAGGCTTTC
AAAAGATGTG GGAACCACGG ACCTGTGATT GCGGGTACAG TTGGTGCTCA GTCTTCTCGC
CAAGCTCTTA AACTTTGCCA GGATGCTGCC GAAGCTGGCG CCGATTTCGC ACTCGTGCTC
CCTCCCTCTT ACTACCCAGC TGCCATGTCA GCTGACGCCA TCCAGTCGTT CTTTGAAGAA
GTAAGTAGCT ATATCTAGAT CACTTCGTAT ATATTCGAGG GTGAGCTGAC TTAGCCCCGA
ATCTCTTTAG CTTGCCAGCG CTTCTCCAAT TCCCATCATC ATTTATTCCT ATCCCGGAGT
TTGCAGCGGG ATCAACATGG ACACCGACTT GATTTGTCGA CTTGCTCGAC ACCCTAACAT
TGCTGGCGTA AAGCACACTG ATCATGACGT CGGAAGGATT GGGCGGGAGA CTGCTCAGTC
TATGGGCAAT GCCTTTGGTT GTGAGTATAG TTTACGGAAC TTCGGAAAGT GTAGCTGATT
TTGCCCTCTC TCAGCTCCTT TCACAATTTT GGGTGGTGCC TCAGACTATC TTCTGGGCAC
CGTTGCTGTT GGTGGCCAAG GCGCCATTAC CGGCATGGCC AATGTCGCTC CTCGCGTCTG
CGTCAAAGCT TTTGAGCTCG CACGAGCTGG CCGATACGAG GAAGCTTTGC AGTATGCCAG
GGTGATTTCT ACTGCCGAAT GGGGCATGGG CAAGGGTGCC ATCCTCGGGA CCAAGGTGAG
CATTTCGAAT AGTCGACTTT GACGATAGTT AACATTTCAA TTAGTACATG ACTGCCTGGG
CCAATGATTA CGCCCCTACA GCGGCTCTTG CTAGAAAACC GTTGCCCCTG TGCCCTGAAT
CAACCAAGCA ACATGTCCGA GCGGTTGGGA CCGAGATAGT AGCTCTCGAA CGCTCATTGG
AACAGCAAGG ATGGGCTGGA GCAGCTATGA GGGGAGAAAC GCAAAGCGAG AAAGTACTTG
CTCCTTCGAA GAAGATCAAC GGCATTGTGA ACGGTGCGGA AGAAGTGGCC ATTTGATTAA
TTACTTTAGC CTCAAGGTCC TGGAAGATCT GCGATCACAG TCTGTAGTTT TTATCCGCTT
TCTATATGCA TTTAATACTC CGATGA
 
Protein sequence
MPAATISPKT LPPGVYCPTI TFFEPTAEQN LDVETHVKHM EFLAKSGLAG VVVQGSTAEA 
VTLDDEERKT LIRTAKEAFK RCGNHGPVIA GTVGAQSSRQ ALKLCQDAAE AGADFALVLP
PSYYPAAMSA DAIQSFFEEL ASASPIPIII YSYPGVCSGI NMDTDLICRL ARHPNIAGVK
HTDHDVGRIG RETAQSMGNA FGSPFTILGG ASDYLLGTVA VGGQGAITGM ANVAPRVCVK
AFELARAGRY EEALQYARVI STAEWGMGKG AILGTKYMTA WANDYAPTAA LARKPLPLCP
ESTKQHVRAV GTEIVALERS LEQQGWAGAA MRGETQSEKV LAPSKKINGI VNGAEEVAI