Gene CNC01730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC01730 
Symbol 
ID3256399 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp478229 
End bp479775 
Gene Length1547 bp 
Protein Length386 aa 
Translation table 
GC content50% 
IMG OID638255393 
Producthypothetical protein 
Protein accessionXP_569965 
Protein GI58265618 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.199105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATG TCGCAAGTCC CCAGGAGTAT CCCGATACTC CCAGCCAATC CTCGACCTCG 
GCCAGAATTC CTTCTCCAAG AGCTTTCGAT GTTGTGACAG CGTACAGACG AGCTTTGGAG
GATGACAAGG TGTGTATTCG ATCTGATTTG TAAACCTTTT TAGTGGTGGT GCTGACTGCA
TAAATACAAG GTTCCCCACC CTATCGCTGC CATCTTGGCC CTCGTTGAGC TCATGGAGGC
TTCCACGGGT ATGACTATTT TCCACCATGT ACGATACCGA TCAAGATACT GACCATGTCG
CATATTCCAG CTTCCACTGT AACTGGTCTC GCTTCCGAAC TCACCGTTGG TCGACAGGCT
TTGATCAATA CCCAAGCGAG TCTTGGTGTT CGAGCAGGCT GCCAGCTGTG GGAAAGATTC
TTTGCTCTTT TTCCTGGTGT CGGCGAGGTA GGTCTATATA TATTTTTTGG GGGCGTTGGT
GGGAGTTGGA TCAAAGCATA CAGGGCTGAC GTTTGTCTAT TTTAGGATTT CCCCGCTTAT
AAAAAATCAC TGATTTCACA AGGCCGTTCG TTCTGTGCCA TTACGGCTCC TCAATGTCGA
GAGAAGATTG CAGAGCTGGC CGTTGGTTTC CTTCGTGACG ATTGTGTGGT ATGTGTCTCC
CGAGTCATTT CTCCCAACAA GGCGGCGGCC TGCATGCTTG CTAACCAGGA CACAGATTCT
TACCCACAGC TACTCAAGGA CAGTCATTCA GACAATCTTG AGAGCACACA AGCAACACAA
GAGAATACGT GTCTATGTCA CAGAAGCCCG TCCTGGGTGT CTTGGGTAAA GCATTATCGG
CTTACCTTGT ATGTGACAGA TGGCTGACAA ATGGCCCCAG GATGAAAACA CACCAATTCC
TTACTGCTAA CGGCATTCCT TGTACTGTTG TACTTGACAG CGCTGTTGCC TATGTGATGG
AGCGTGTCGA TATGGTGCTT GTTGGATCAG AAGCTGTTGT CGAGAGTGGT GTATGTCGTT
TTTTATAAAA ACCCATGCTT TCATCGCAAA CCGCCGCTGA TTCTTTTTGG TAGGGCCTCG
TTTCTTCTGT GGGGACCTAC CAAGTGGCTC TCGTAGCCAA AGTCATGCAA AAGCCCTTTT
ACGCCCTCGC AGAATCATAT AAATTCCTTC GTCACTACCC TCTTTCGCAA ACCGACTTGC
CTATACCAGC TTCCTCTGAC CGGCCCGCTA TCCCTCTCGA GTTCCCGTCC ACCATTCCTG
ATACCCAGTT CATCCCTGGT TTCCTCTCGC GAGGCAGCAG CTTGACTCCT CAGTCAAGAA
GTCCTCAAGC ACCGGCGACA CCCCCACACG CCGTCGGTGG TGGTGGTGTT GGTGTAGACG
GAGGAAAGAA ATATGAGAGG ATGGAGATGA CGAAAGAGAT GGAAGAGATT AACCCGATGG
TGGATGTGAC GACCCCAGAC TTGATTGACT TTATTATTAC CGATCTGGGA GAGCCTTTAA
GCCCTACGTC TGTCAGTCAG TACCTCGTCG CGCAGTTCTC TTCATGA
 
Protein sequence
MQYVASPQEY PDTPSQSSTS ARIPSPRAFD VVTAYRRALE DDKVPHPIAA ILALVELMEA 
STASTVTGLA SELTVGRQAL INTQASLGVR AGCQLWERFF ALFPGVGEDF PAYKKSLISQ
GRSFCAITAP QCREKIAELA VGFLRDDCVI LTHSYSRTVI QTILRAHKQH KRIRVYVTEA
RPGCLGMKTH QFLTANGIPC TVVLDSAVAY VMERVDMVLV GSEAVVESGG LVSSVGTYQV
ALVAKVMQKP FYALAESYKF LRHYPLSQTD LPIPASSDRP AIPLEFPSTI PDTQFIPGFL
SRGSSLTPQS RSPQAPATPP HAVGGGGVGV DGGKKYERME MTKEMEEINP MVDVTTPDLI
DFIITDLGEP LSPTSVSQYL VAQFSS