| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00810 |
|---|
| Symbol | |
|---|
| ID | 3256318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 228432 |
|---|
| End bp | 231525 |
|---|
| Gene Length | 3094 bp |
|---|
| Protein Length | 856 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255299 |
|---|
| Product | gamma-tubulin complex component 3 (gcp-3), putative |
|---|
| Protein accession | XP_569385 |
|---|
| Protein GI | 58264458 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATG CCTACACTAG CTCTGGAGCG AAAGAAGGGG GCGCTGAGAA GGCCCTCAAA
TTCAATGCGA TTTGGAACAA GCTCGAGCGA GGTGTGAGTC TGGGCGCAAC CCGTGATTAC
AGAAGTAACT CATCACTCGG TTGCCAGAAA TTATTGTCAT CACCCAATCC TCATTTGGAA
TTATTAGCAG CTCTCTCCCC TATCAATCCA AACAACGCTT CCAGATCGAC TGTTGCCGGA
TCTTCTAAAT CGCCCAAAAA TATGCCGCCA CCAACCTTCC CATCCACAAA GCCCAGCTCG
TCAAGACAAC CATTGGTCGA CGCCGTGCCA AACATTTCCC TATTAGGTTT CGACGCCAAA
GGCAAGGCTA AGGCGGATAT TATCAATCAA TGGCGTGCTA ATCGCTGTGA GTTGCCGATT
ATAATCTCTA TTCCCTCGAC TGATTGAATG TTTCTAGCTC AACCACCGTT TCCTCAGCAT
TTGCTCTTGC GGGATACACT TTACCTCCTT CAAGGGATAG ACGGGCGTTA TGTACACTTT
GCCGTTTCAC CACCGAAAGA ACAGAATCCA TATCTTACCG AAAGAGGTCG TGAAGGCGAG
GGAACCGGAT TCCCATTAGG CAAGGAAGGG CCCATTATTG AGGAGGGATA TGATGACGAA
GTAGTCGGTA TTGAAATCGT TGCTGATGAG GAAAAGGTGA AATCTACTGA TTATGTATGG
AGGGAAGACC ATGCTGACAA GCATTAGGAT GGAGTGATAT CTCAACCCAC CAGGACATTG
TTGATGCAGC TGTCAGAGAT GGGAATGCTT TATCGACGTG TAACAAACTT TGTAAACTCC
AGACAAGCTG GGGATAGCAA AGGAGGGATG ATTGAACAGG TCAGTCACAA TGCATGATCC
GCGCAAAATG AAGTTGACGA TTTCTTATAC TGTCATCTTA AGAGTCTGTG CCATTTTCTT
CATCATGAGC TTTCGGAATA CCACCGACTA CTGGCTGTAC TTGAATCCCA GATGAACACG
GCGTCTTCCA GTGGAGAGCA GCCTGACAGC GGTCTCACAT TACTGAGACT CAGACTATGG
ACCGAGGATA TGAAGTTGAA GTTGAAGCAG ATGAGTACTA TTGTGGATGA GGCGAAGAGT
GAGTCAATCG TGTGGATGAC TATGAAGGAA CTGACATGCC CGGTCGTCAG ACACCCATGG
TGGAGCTTTA GTATCCAAAC TACATTCACA CACAAGTAAT GGTGATCCTC TGATCCGGAA
TTTCACCACC CAGATTCTTG AAGAGGTAAA TCAGGAATAG TTTTCTCACA TTTGTGCTAA
GCGCTCCCGT AGGTCTCAAA ACCATTTTTC CTAACTCTCC AGCGCTGGAT ATTCTCGGGC
GAGCTCCATG ATCCCTTCAA AGAATTCTTC GTGCAGCTCA ACCCTGAAAA CGTTTCATTT
CGAGAGGGCC AAATTTCACC GACTGGTGAT GTAGGCTTTG AGATGGGCAT GGACGCAGAT
GGTGGAGAAG AGGAGGCGTA TAAGCTGTGG GAAAAGAAGT ATGTGTTTGT GAAAAAGATG
GTGCCTGGGT TTGTGGGCGA GGACTTTGCA AAAAAGGTAG GTCGTCTAAT ATGAATCGCG
AAACCATGTG TCGATTGAAA AATTGATTTT CTCTTATTTA GATTTTCTCC ACTGGTCGGA
GCTTGAACTT TATCAGGTAT AGCTGCCATG ATAGCGACTG GATCGAGACG CAAGCCAAGA
TAGCCAATGC AGGACGAGGT GAGTTCATGG GATGTAAAAG AGGGTCAATG TCTGACAGAG
TTGTAGCACT CAAGTATAGC GATTTGGCCG GCTTGGAACG ATCCATCGAC GATGCCTATT
CAATAGCTTC TCAGCGTTTA TTAGAGATCT TCTTTGACAA ATTCAGATTG CTTGATCACC
TTCGAGCGCT CAAATCGTAC CTGATGTTAG GAGCTGGTGA TTTCACTGAG CTACTAATGG
AAGCTATGGC GTGAGTTTTG TGCTGAACCA AGGTCACTTT TCTCATGCTG ATCATTTCTA
GCCCTCGACT CTCCAAGCCC GCCATCAACC TCTACCGCCA CCACCTCACC TCCGATCTCG
AGTCCGCCAT CCGCGGCTCC AATGCCCAAT ACGACTCTCC CGATATCCTC CGCCGTCTGG
ACGCTCGTAT CCTCGAATAC TCTCACGGCG AAACAGGGTG GGACTGCTTT GCGCTTCAAT
ACAAGGTCGA GGCTCCTCTC AACGCCGTGT TGGATCATCG TGCGATGGGT GATTACGATC
GATTGTTCAA CCATCTCTGG AGGTTGAAAC GTGTAGAGGT AGTTTTGACC CAAAATTGGA
TGAGGGTTAC GAGCGGGTCT AAAGTGTATG AGCGGGTACC CGGTTTGAAC AATGATTGGC
ACCATTGTCG CATCGTCCAG GCTGAGATGG TCCACTTTCT TCGTCAACTA CAAGCTTTCT
GTCAGCTGGA GGTTATAGAA TGCTCATGGG CAGATTTGAT CGAATTTACA ACGAAAAGGG
AAGGGGATTT GGATGCGCTT ATCACAGCTC ATCGAAAGTA CCTAAGTAGG GTTGTGAGAA
AAGTGCTGTT ATTGAGTGCG AAGAGAGATA AGGAAGTGGG TGCCCTCAAA TGCTAATCCA
TTTCCATTAA CGCAGCTGAT GGTTATCATA GGAGATACTT TTGGATCTTG TGAGAGATGC
ATTGGAGCTT ATATTACAAT TCAAAGATGC CATGGTAAGT TTGCTCTTTC CAACGACTAG
CGCGTTCATT TACCATAGTC TACAGGATGA CCTCTACGCG TGGTCACTTG GGGAAGCAAC
CCGCCTCGAC CGACAACGTG ACGCCTCACG AGGTCTCTAC ACCCCATCCA CCTCGTCTGA
CGATCCTACT CGTTCTGAGG AGCAACTACA GTCCATCCGA ATTCGAATTC GAGAGTGTTC
AAACAGTTTC CAACACAGAG TGGTTAGCAT TGTGCACATG GCTGGGGCGC ACGCGGATCT
CGATGTAAGG TTTTTGGCTA TTAGGATCGC GTTTAATGGG CATTATTCAT TGCGAAAGAA
GGATAAAGGG TCATCGAGAT CGACAAGGGC TTAA
|
|---|
| Protein sequence | MIYAYTSSGA KEGGAEKALK FNAIWNKLER GVSLGATRDY RSNSSLGCQK LLSSPNPHLE
LLAALSPINP NNASRSTVAG SSKSPKNMPP PTFPSTKPSS SRQPLVDAVP NISLLGFDAK
GKAKADIINQ WRANRSQPPF PQHLLLRDTL YLLQGIDGRY VHFAVSPPKE QNPYLTERGR
EGEGTGFPLG KEGPIIEEGY DDEVVVISQP TRTLLMQLSE MGMLYRRVTN FVNSRQAGDS
KGGMIEQSLC HFLHHELSEY HRLLAVLESQ MNTASSSGEQ PDSGLTLLRL RLWTEDMKLK
LKQMSTIVDE AKNTHGGALV SKLHSHTSNG DPLIRNFTTQ ILEEVSKPFF LTLQRWIFSG
ELHDPFKEFF VQLNPENVSF REGQISPTGD VGFEMGMDAD GGEEEAYKLW EKKYVFVKKM
VPGFVGEDFA KKIFSTGRSL NFIRYSCHDS DWIETQAKIA NAGRGEFMGC KRGSMSDRVV
ALKYSDLAGL ERSIDDAYSI ASQRLLEIFF DKFRLLDHLR ALKSYLMLGA GDFTELLMEA
MAPRLSKPAI NLYRHHLTSD LESAIRGSNA QYDSPDILRR LDARILEYSH GETGWDCFAL
QYKVEAPLNA VLDHRAMGDY DRLFNHLWRL KRVEVVLTQN WMRVTSGSKV YERVPGLNND
WHHCRIVQAE MVHFLRQLQA FCQLEVIECS WADLIEFTTK REGDLDALIT AHRKYLSRVV
RKVLLLSAKR DKEEILLDLV RDALELILQF KDAMDDLYAW SLGEATRLDR QRDASRGLYT
PSTSSDDPTR SEEQLQSIRI RIRECSNSFQ HRVVSIVHMA GAHADLDVRF LAIRIAFNGH
YSLRKKDKGS SRSTRA
|
|---|
| |