Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00720 |
Symbol | |
ID | 3256244 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 205111 |
End bp | 209504 |
Gene Length | 4394 bp |
Protein Length | 961 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255289 |
Product | conserved hypothetical protein |
Protein accession | XP_569954 |
Protein GI | 58265596 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00727] small oligopeptide transporter, OPT family [TIGR00728] oligopeptide transporters, OPT superfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00839319 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CCACAACTGC ACGGTATCCA TTATCCATCC ATCACCCATC ACGATCGCAT TAACTTTATT ATTTTTGGTC CACAGCAATC TTCGACCATC AGCTTAAGCA CATTGACGCA CATCATCTAC CATCTCAAAG TGATCCGTGA TCAGGGCCCT CCGGCATTAT TTACTGTTGT ATCTGTTTCA CAGTCACACG CCCACGACAC ACCACCACCA AGTCGTCACC AGCTGTCAGC CAATTTGGGC CACAAAAGCA GGGGAATCAC GGTTGGACGT AGAAGTTGCG GGTAATCGTT CAGCAGCTTC GAAGTGTCCC CAGTATCGCA CGCTCTCGAG AGTACACGAT CGATCTTGTA CAGCCGACCA CTATATTTTC GCAAGCAATT CGACACTCAA CATCCTTTCG CTTCAGCACA GTTCAATATC TGGTGTGACA ATCTCCAGTC GCTGTCAGTT CATTGGAGCT GGACTTAGGC AGTCTTCGTA TATTCATATA ACCCAACAAC AATTTTATTC TGGCAGCTGG CAATCGCCCA GTTACAACCA GAGAAACTGT ATTGGAACAA GAGATAGTAT CTCAGATTTC TATTCCTGCA TCGCGCCTTT CAACCTCCAG CCAACACGCT CCATCCGACT ATTAGACATC ATCTCTCTCG ATCTTTCACT TGCCAGGAGC TTAGCATCCA CCGTGAAGTC CGAAGCTCGA TAAAATTAAA GAAGCGCAGA ACGCGCAGCA TATCTCGTGA GCCTCTACGA TCATCGCATA AGCATCTCTT GCACTGCCAG CTCTGACCGG CTCGTACCTC TCATAGATTC CCATAATGCC CCATACAACC AACGTCTCTT TATCGCCTCG GCCCACGACA CCATCTGGCT CTCTGCCGCG TACGGATCGT TCTCGCCGAC CTCTTCCTCC AGACACTGCA GCGTCTGGTA TCAACGATTT ACCCCGTCGG GAATTCTTTT CAGAAGGTAG TGATGGTGAA GACTATGATG ATGAAGAAGA TGAGGAAGAG GAGGATGACG TTTTTGCATT CAATCGACCA GCAACCGCTG CTCAACCTAA TGGAGCGAGT TCATCAGGCT ATGGGACCGC GCCAACGTCT GGTAGGCCAA CGACAGCTGG TATTAGCTGG ACGCAGACGA CTGCTGAAGA AAGAGGTCCA GCACACGTCG GTACAAGCAC AGGTCCTGGT ACTCTGTCTT ACGATGGTCC AACACCTTTG CGAGATCAGC CACAATCTGT CAACAGCAAT AATAAAGATG CTGTGCCTAC ACCAACTGGT GTCATCGATG TCGGCGGGCA TTTACCAGAT ACCACATACG ATGTCAACAA TCCCCCGCCA TTCAGTGGTA AGAATAACCC CAATAATTCT AGTTTTGCGT ATAACATAAC GGGACGGTCA TATCGTCCAA GAACCGGGCA ATCTTTGCTT GATCGAATAC ATAGGCGGAG AACACCAGAG ACTGGAAAGT CAAGTGTGAC CACCATGACC GCTCTGACAA GTGCGCACAC GGACGACTCT GCAGTATCAG ACTTCGCATC GACAAGCGAT GTGGATCACT ACTCGCACAC CCCTCGTCGA CGAATTAGTC AGGGCAAGCG ACCAATCAGT TCTGCTCCCC CAATTTCAGA AGACGGGGTG TATAGTGAGG ACGGCAATTT CGGCAGACGT AGGAGACGAA GCCGAGGAAG TATTGGGATG ACAGAGTTAA CAGGAGATAT GACAGTTCCA GATGGGATGA CTACCTGGGG AGATGGAATG GGCGGTTTGG CCAAAGGCGG AAGTGATGGG GAGGTGCAGA GTGCTATGGA TGTGGATTTC GATGAGGAAG ATAGTCCGTA TCCGGAAGTC CGAGCTTCGG TGTCTAACAT TGACGATCCT GACATGCCTG GTAAGCGCAA AACTATGGTT ATAAAATTAT CATTGACACA TCTCAGCTAT GACCATCCGA GCTTGGGTCC TTGGTATATT CCTGACTATT CTCGCCTCTG GCTGTAACAC CTATTTTCAC TTTCGTACGC CTGCTCCTTA CATCTCTCCT CTCATTGTAC AGTAAGTGTT TCATCCTGCC GGGCGCGCCA GGTCTAACAA TAGATTGTAG AGTTGTAGCA TACCCCCTGG GTAAGTTTGC TGCATGGATT CTCCCTATCG ACACGTATAA GCTCCCTTTA TGGCTTGGTG GGCGTGAGTT CAGTTTCAAT CCCGGCCCGT TCAACATCAA AGAACACACC GTCATCGTCA TGATGGCCAA CGTGGCTATT GGGCCCGCTT ATGCCCTTTA CGCCACTGTA TCAAGCGAAC TCTATTACAA TCACCCGATG GGCTTTGGTT TCTCTATCAT GTTCCTGTTC GCCACACAGA TGACAGGCTT CACACTAGCT GGTATTTGTC GACGATTTGT CGTTTGGCCA GCTTCAATGA TTTGGCCCGG TAATTTAGTG GTTGCTACCA ACTTGAACAC CTTCCATGCG GAGGAGGATG GTTTTACGGG TGGTATGAGC AGGTTCAAAT TCCTCATCGT GTGTATGGCA GGATCATTCG CATGGTACTT TTTCCCAGGT AAGTATTGTG GATCGATGGA ATAGGCAAAT ACGCTGATGC ACCATCCAGG CTTTGTTTTC ACGGCTTTGT CGTATTTCTC ATGGGTTTGC TGGATTGCAC CAAGGAACAA CGTCGTCAAC CAACTGTTTG GTGTGTCGAC TGGTCTCGGT ATGGGATTAT TGACATTCGA TTGGACCCAA ATCACTTGGA TCGGCAACCC TCTTACTACC CCTTGGTGGG CTGAAGTGAA TGTTGGAATT GGATTTGTGA TCTTCTACTG GATACTTACT CCGATTCTCT ATTACACCAA TGTACGCTTG AAATTCGCTG GATTATGATC ATCAAAACAC TGACATTCTT CACAGGTGTG GCATACTGCA TTCCTTCCTA TCAGTGTCAT CCAAGCTGCT GATCGGTTCG GAAGTACCTA CGATGTTTTC AACATCCTCA CTCCTGAGAT CACCCTTAAC AAGACCGCAT ACGCCGAATA TTCCCCGATA TACCTCTCTG CATCGTACTG CGTCACATAC ATGGTGGCTT TCGCTCTCTC AACTGCCTTG CTCGTACACA CCGCTCTATA TCATGGTCCG CGAATCTACC GCGCCATCCT CAACATCAAG ACTGAAGCGG ACGACATCCA CTACAAGCTC ATGAAAATGT ACCCCGAGGT GCCCGATTGG TGGTTCCTTG CACTTTTTGC TGTCGTCTTC GTCTTTGCTG TCGTATCAAT AGAGGTGTAT CATACAGAAC TGCCAGTTTG GGGATACCTT ATCAGTGTCC TTCTTCCATT CATCTATATC ATCCCGACAG CGTTCATTTA CGCGATGACC TCTCAGCAAA TCACTATTAA CCTTTTGGCG GAGCTTATCC CTGGATACAT CTTTCAAGGA CAGCCTCTTC CTGGCATGGT ATGTTTGTCA GCGTCAGACC TTATACTGTT GCTGACAATG TCTTAGATCT TCAAAGTTTT CTCTGTGCAG ACAATCGTAG AAGCACTATC ATTCGTCCAA GACCAGAAGC TTGGCCATTA TATGAAAGTC CCGCCTCGCG CAACATTTGT TGCTCAGCTT TCAGCTACGA CTGTGGCGTG CTTTGTGCAA AGTGGAACCA AAGAGCTCTT GTTCCATGTA GTCAAGGACA TTTGCACGGC CACTCAAAAG AGTCTGTTAA TTTGTTCATC GACCAAAGTT TTCTTTACTT CGTCGATTAT CTGGTACGTG GCTTTGAAGG TGTAAGCGGA ACCGCCGACT GACCATGTCT GACCACAGGG GACTTATAGG ACCGAATCGG CTTTTCAGCA AAGGGGCTTT CTACTACCCG CAACTCTTCG CACTCGTCTT TGGTGCCGTT CTTCCTATAC CTCTTTGGTT CTGGGTCCGA CGCAACCCTC GCTCTATCTT CCGCAACCTC AATTTCCCGG TCATGTTCAA CGGCGCATTG TCTATCCCCC CGGCGAGTGG CGTGAACTAT GCGAGCTGGT TGTCCACGGG CTTTATATTT CAATTCTGGT TGAGAAGGAA GAGATTTGCT TGGTGGTCCA AGGTGCGTAC TGTGCAAATC GTGTGACAAG GATGACTTGC TAATTCTGGT GTACAGTATA ATTACGTTCT CTCCGCTGCC CTCGATGTCG GAACTGCCCT CTCTGCTGTC GCCCTTTTCC TGTTTATTGA TTTACCAGGC GCTTCCCTTT CTTGGTGGGG AAACAACGTG TATAAGCAAA GTAGGTCTTC TCCTCATTCT CACGCATCAC TAGGCACTGA CAAGACGTCG ATAGCGGTTG ATTGGGATGG TGTCGGTGCT ACGTACTACA AGCCTCCACC AGAGGGCTTT GGCCCGGATA CATGGAAGGT TTAA
|
Protein sequence | MPHTTNVSLS PRPTTPSGSL PRTDRSRRPL PPDTAASGIN DLPRREFFSE GSDGEDYDDE EDEEEEDDVF AFNRPATAAQ PNGASSSGYG TAPTSGRPTT AGISWTQTTA EERGPAHVGT STGPGTLSYD GPTPLRDQPQ SVNSNNKDAV PTPTGVIDVG GHLPDTTYDV NNPPPFSEDG VYSEDGNFGR RRRRSRGSIG MTELTGDMTV PDGMTTWGDG MGGLAKGGSD GEVQSAMDVD FDEEDSPYPE VRASVSNIDD PDMPAMTIRA WVLGIFLTIL ASGCNTYFHF RTPAPYISPL IVQVVAYPLG KFAAWILPID TYKLPLWLGG REFSFNPGPF NIKEHTVIVM MANVAIGPAY ALYATVSSEL YYNHPMGFGF SIMFLFATQM TGFTLAGICR RFVVWPASMI WPGNLVVATN LNTFHAEEDG FTGGMSRFKF LIVCMAGSFA WYFFPGFVFT ALSYFSWVCW IAPRNNVVNQ LFGVSTGLGM GLLTFDWTQI TWIGNPLTTP WWAEVNVGIG FVIFYWILTP ILYYTNVWHT AFLPISVIQA ADRFGSTYDV FNILTPEITL NKTAYAEYSP IYLSASYCVT YMVAFALSTA LLVHTALYHG PRIYRAILNI KTEADDIHYK LMKMYPEVPD WWFLALFAVV FVFAVVSIEV YHTELPVWGY LISVLLPFIY IIPTAFIYAM TSQQITINLL AELIPGYIFQ GQPLPGMIFK VFSVQTIVEA LSFVQDQKLG HYMKVPPRAT FVAQLSATTV ACFVQSGTKE LLFHVVKDIC TATQKSLLIC SSTKVFFTSS IIWGLIGPNR LFSKGAFYYP QLFALVFGAV LPIPLWFWVR RNPRSIFRNL NFPVMFNGAL SIPPASGVNY ASWLSTGFIF QFWLRRKRFA WWSKYNYVLS AALDVGTALS AVALFLFIDL PGASLSWWGN NVYKQTVDWD GVGATYYKPP PEGFGPDTWK V
|
| |