Gene CNC00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00580 
Symbol 
ID3256662 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp162245 
End bp163302 
Gene Length1058 bp 
Protein Length295 aa 
Translation table 
GC content48% 
IMG OID638255276 
ProductN-acetylglucosaminylphosphatidylinositol deacetylase, putative 
Protein accessionXP_569842 
Protein GI58265372 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAGATGCCT CCAGCTCAAG GCCCCGGCCA ACCTCGCCCT TTAGCATTCC CATTCGTTTT 
TGCCGTCATT TTTCCTCTAT TCCGCCTCCT CTTTTCTCTG ACGCCGATAA CGCAACCTCA
AGACTTTAAC CTTCTCACTC CAAAATCGAT CGATACTTTG GGAGACAAGC CATCAGCACT
CATAGTTACT GCGCACCCGG ATGACGAAGT CATGTTCTTT AGCCCCACTA TCCTGGGCCT
GATTGGTGCA GGATGGGATG TAAAGGGATT ATGTCTCTCC ACTGGCAAGT TTTATTCCTG
TACTCTGGTG AAAGCTGAAG CATTTTTCTG CAGGAAATTC AGAAGGACTA GGGCAAAAAA
GGAAAGAAGA GTTCATCAAG AGCTATGAAG CATTGGGTAT TCCAGCAGAA AATCTTGAAA
TTACTGATCA CCCGTACGTT ACTCCATCTT ATAGGGTGGT CATTACTGAT GGCTTTTCAA
GTGATCTTCC AGATGGCTTG ACAACCAAAT GGAATACTAC ACTCGTCTCC ACGATCATCC
AAGACAGCCT TTTCTCTCAT CCTGTGGATA TCGTGAGTCT TTTAATGATT CACCGTCCGA
TGGACCGTCC TCTGAATCCC TGATTGACGT GGAATCTGCA GATTGTCACA TTCGACCCGA
AAGGTATCAC CTCTCACCCC AATCACGTTA CCCTTCCATC TTCACTCGCC CTTATCCCGG
CCGAGCGCCG TCCACGGGTA CTAGCCCTTC AATCTCCTGA CATCTTGCCC AAGTTCACCG
GCCCTCTATA CATCATATAC CTCCACATTC GAACCCTCTT CTTCTCTCCA CAGTTCCAGC
GAGCATTCCA ATTCCTCTTC CCTAGCTTCA ACACCTTCTT CGGGACCGAA AATGCTAAAG
GGACGCAGAC GCATGTGATG ATCAATGATT TGAGAGGATG GGCCATCGGT CTGAAGGCGA
TGATGGCGCA TAATTCGCAA CTTGTCTGGT ACAGGTACCT TTACCTTGCT TTCTCAAGAC
TGATGTGGGT AAACGAGCTT GTTGAGGTTA CTTATTAA
 
Protein sequence
MPPAQGPGQP RPLAFPFVFA VIFPLFRLLF SLTPITQPQD FNLLTPKSID TLGDKPSALI 
VTAHPDDEVM FFSPTILGLI GAGWDVKGLC LSTGNSEGLG QKRKEEFIKS YEALGIPAEN
LEITDHPDLP DGLTTKWNTT LVSTIIQDSL FSHPVDIIVT FDPKGITSHP NHVTLPSSLA
LIPAERRPRV LALQSPDILP KFTGPLYIIY LHIRTLFFSP QFQRAFQFLF PSFNTFFGTE
NAKGTQTHVM INDLRGWAIG LKAMMAHNSQ LVWYRYLYLA FSRLMWVNEL VEVTY