| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00220 |
|---|
| Symbol | |
|---|
| ID | 3256812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 62618 |
|---|
| End bp | 65352 |
|---|
| Gene Length | 2735 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638255242 |
|---|
| Product | CTP synthase, putative |
|---|
| Protein accession | XP_569392 |
|---|
| Protein GI | 58264472 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
|---|
| TIGRFAM ID | [TIGR00337] CTP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATAAATCGTC AAGTCCAAAC TATCTCCGGC ACGTCCACTA GACACGCTCA GATAGACAGA
CATCGATATA CCGGGATACC GACCACCACA AAAAAAAAAC CGAAACTCTT TACATCTTTC
ATCTACGACT TCTTTCAGGC TTCGGAGCTA GGCTATAGAC ACGATGGTCA AATACATTCT
CGTTTGTGGT GGTGTCATCT CGTGAGTATT GATCTGTACA CTGAGTGTAT GCATGTCCTG
ATTAAGCGCG ATGTATAGGG GTATTGGCAA GGGTGTCATT GGTACGCTAC ATTTTCTTCT
TTACAGATCG TTTTGCGAGT TTCGTGTCTT TCCGCGGCAA TGTATAGTTG AACGTTAGGA
TTGGAATAAC GCTGCGCGAC GTGGAAATAC GATGATGAAG ATGTCGGCTG CAGGGAAACT
GACAAACTTG TCTTTGTAGC TTCTAGTACC GGCTTGATCC TTAAGACCGC TGGCTTAAAG
GTCACTTCTA TCAAGATTGA CCCTTATATG AACATTGATG CCGGTACTAT GGCCCCTACC
GAGCACGGCG AAGTCTACGT CCTCAATGAT GGTGGTGAGA CCGATCTTGA CCTCGGTAAC
TACGAGCGAT ACCTCGACGT TTCCCTCAAC AAAGACAATA ATGTGACTAC CGGGAAGGTA
TACCAGCATG TTATTGACCG TGAGGTGGGT TTTTGGAAAA TGGAATTTAG GAAGAAGGGA
AATAGATGTT GATGGAGATG TGATTCAGCG ACGGGGAGAT TACCTGGGAA AAACTGTTCA
GATTGTCCCT CATTTGACCA ACGCCATCCA GGACTGGGTC GAGCGAGTTT CCAAGGTCCC
TGTGGACGAG ACCGGAGAGG AGCCTGACGT CTGTATCATC GAGGTGAGAA TTTTCATGGC
TGTGTTTCTT ATGTGTTTTG CTAATTGCGA CTAGCTCGGT GGTACCGTTG GTGATATTGA
ATCTATGCCT TTCATCGAGG CCATGCGTCA ATTTCAATTC CGAGTCGGCC ACGAAAACTT
TGCTCTTGTC TACGTCTCCC TCATCCCCGT CGTCGGCGGC GAACAAAAGA CAAAGCCTAC
CCAGGCCGGT GTGAGAGACC TCCGAGGTTT GGGCCTTCTC CCCGACTTAA TTGCCTGTCG
ATGCACAGAG AAGCTTCTTA CAGCCACTAT GGAGAAAGTC TCCATGTTCT GCCATGTTTC
TCCCCGTCAA GTCCTTGGTG TCCACAATGT TTCTTCCACT TACCATGTTC CGCTGCTCCT
TCAGGAACAG GGTATGCTGA AGTTCCTTTG GGAGAGGCTC AGTTTGTCTT CCATCAACAT
GAGGCCTGAG TTGAAGGCCA GGGGTGAGAA GATAATGGAG AAGTGGCAGG TGTTGACTAC
TGGGTACGTC GTCTTGGTAG CTGAACGTCA TGTATGGCTG ATTTCTTTCT TTCCTTTAGT
TTGGAGAGAT GTTTCGAGAC TGTGGAGATT GTTTTGGTCG GCAAGTACAT TACTTTGGAA
GACTCGTACA TGAGCGTTGT CAAGTCTCTT GAACACGCTG CTATGCGATG TGGTCGAAAG
CTTATCCTTC ACGTACGTGC TTTGAGTACT TTATATATAC CACATGCTGA CTCAACCATA
GTGGGTTGAC TCTTCCGACC TTGAGCTTAC TATGCAGACT GAAAACCCTA TCAAGTTCCA
TAACGCCTGG CAAGCTGTTT GCTCCGCTAG GTAAGTCATG TATTCGATCA GTTTTTAGTT
GAAACGAGCT GAAGTAAGGA AACAGGGGTA TTATCGTTCC CGGTGGTTTC GGTCTTCGAG
GTACCGAGGG TATGATCGCG GCTGCCAAAT GGGCGCGTGA ACAAAACATT CCCTACCTCG
GTATCTGTCT CGGTTTCCAA GTCGCCGTTA TCGAATGGGC TCGACACGTC TGCGGTCTCG
AGAAGGCCAA CTCTGCCGAG CTCGTTCCCG ACTCTCCTCA CCCTGTCATC TGTTTCATGC
CTGAAATCTC CAAGACCCAT ATGGGCGGAA CCATGCGTCT CGGTCTTAGA CCGACCATCT
TTGAGCCTAA CACGGAGAAG AGCAAGCTTA GGAGGTTGTA CGGGAGCAGG AACATTGCTT
GGGAGAGGCA TAGGCATAGG TACGAGGTTG AGCCGAAGTA TGTCGAGCAG CTCGAGGCCC
CTGGGGGTAT GAGGTTTATT GGTAAGGATG AAAGAGGAGA GCGAATGCAA ATGCTCGAGT
TGGATGGTGA GTCTTTCTTT TAATCACATC ATAAACCTTT TCTGCTTTCG CTGACAGATA
ACGGTTTTAG ATCACCCCTA CTTTGTCGGT CTCCAAGCCC ACCCTGAGTT CTGCTCTCGA
CCACTCAACC CTTCTCCTCC TTTCGTTGGT CTCATCGCCG CCGCTTGCGG TCTCGACGTT
CTTGAAGAAC AACTCGCCAA TAACGAGAAG AACTATGTGG ATCCTCACCC TGAGAGCGAT
AAGGTCATCC CTGAGTCAGA GGCGGCTACG CAGGCCGGTA AGGGGAAGAG CCAGTCTGTG
GAAGGTGTTA GAGTAAAGCA TGAGGATGTG GTGGATGCTT TGGGTAAGAA GTTGGATGAG
GTTGCGGAGA TCTAGATGTG GTAGAAAGGG TGTAATAGAT GATACTTTTT ATGTCGTGTA
ATTTGGATTT TTGGAAAAGG ATTGATAAGT TATGCCTAGT GCTGGTTCAT AATCTTATCG
AATGTCACAT GCATTTCTAT ATATATATAG ACCAA
|
|---|
| Protein sequence | MVKYILVCGG VISGIGKGVI ASSTGLILKT AGLKVTSIKI DPYMNIDAGT MAPTEHGEVY
VLNDGGETDL DLGNYERYLD VSLNKDNNVT TGKVYQHVID RERRGDYLGK TVQIVPHLTN
AIQDWVERVS KVPVDETGEE PDVCIIELGG TVGDIESMPF IEAMRQFQFR VGHENFALVY
VSLIPVVGGE QKTKPTQAGV RDLRGLGLLP DLIACRCTEK LLTATMEKVS MFCHVSPRQV
LGVHNVSSTY HVPLLLQEQG MLKFLWERLS LSSINMRPEL KARGEKIMEK WQVLTTGLER
CFETVEIVLV GKYITLEDSY MSVVKSLEHA AMRCGRKLIL HWVDSSDLEL TMQTENPIKF
HNAWQAVCSA RGIIVPGGFG LRGTEGMIAA AKWAREQNIP YLGICLGFQV AVIEWARHVC
GLEKANSAEL VPDSPHPVIC FMPEISKTHM GGTMRLGLRP TIFEPNTEKS KLRRLYGSRN
IAWERHRHRY EVEPKYVEQL EAPGGMRFIG KDERGERMQM LELDDHPYFV GLQAHPEFCS
RPLNPSPPFV GLIAAACGLD VLEEQLANNE KNYVDPHPES DKVIPESEAA TQAGKGKSQS
VEGVRVKHED VVDALGKKLD EVAEI
|
|---|
| |