Gene CNC00180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00180 
Symbol 
ID3256576 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp55549 
End bp57274 
Gene Length1726 bp 
Protein Length424 aa 
Translation table 
GC content50% 
IMG OID638255238 
Producthistone lysine N-methyltransferase, putative 
Protein accessionXP_569384 
Protein GI58264456 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TATTCCCATC GATTTGCACG ATACGATCAC GAAGCCATTT CTAGAAGTAA CAATTGAAAA 
TGGATACTCC TGGCGCCGGT CCTTCGCGTC AATCCAGCTC TGCCCCGGCT GCAAACAACA
AACTTGACCC CAACGTGAAG CCTGGCACTG TTCTCCTCAC TTCTGACCTT CTCGTACGTC
CCGATACCTT TTGCTATATA TGTCAGGAGA GTATGCTTAC CTGGGATGGG ATGCCACCTG
CCAAAACCAT AGTCCTCTTT CCAACCAGCA AAACGCTTCA AAGACGCCGT TTTGGAACCT
ACTTCCACAC CTTCTGGACC CAAGACGCAT AGCGTCACAA CTCTTACTTT TGATGATACA
GGAGATAGAT TGATCAGTGC GGGAGATGAT AATCAGTTCA TCCTATGGGA TGCGAGAAAG
GGCAAGTGAG TCATCGGGTC TCAGTTTATC ATGAAAAGTG GATGGGACAA AGAAGCTGAG
AGGGGGAACA GGAAAATCAA GTCGTTCTAT TCTAAAAAGT ACGGTATCGA TCATGTCCGA
TCAACTCATA AAACTGGCAC TATCCTTCAC GCTTCTACAC AGGGAGGAGA CCACGCAGTG
CGATACCACT CGACACATGA TAATGCGTAT CTTGCGTACT TTAAAGGGCA TACTGCGCGT
GTACGGTCGA TCGATATGTC GCCTGCGGAT GACTCATTCG TGACTGCTGG AGATGATGGC
ACGGTTCGGC TATGGGATCT GAGGGCGAAT GCGTGTAAAG GGTTGGTGAA TGATGTTGGA
GGCTCAGCGA TAGCTGCGAT GGATAATACG GGAGTTGTGT TTGCTGTGGC GTGCTCGGAT
ACACAGACAA TCATGATGTA TGCCACGAAA ACTGCAGATG TGGTGAGTTC TTTTTAGATG
ATTTGTCAAA TGAGTAAGCT GAGACGATTA TTAGCACCCA TTCATCCACC AAGGTCTTAT
CGATATTGCT CTGGAAGATA TATCGACTCC TCCTCCCAAA CCCATCTTCA CTTCATTGCA
CTTTTCGAAC AATGGCCAGT ACCTCCTCGT CGGTACATCT TCTGACGTAC ACTACGTTCT
CGATGCAATC TACCTTACTC CTCTCAGACG CCTTGTCGGT CACGTAGGCT TGGAACGCGA
TGCCCAAGGT AATAAAGGCG TCGAGCCCCG GCGAGGGATC AGCGGTGAAG AGCTTTGTTG
GACAGCCGAC TCCAACTGGG TGATATCTGG GTCTGCGAAC GGGGAAGTGG TCGCGTGGGA
CCTCCGTCCT GAACCGGGGC AGAGCCAGTT GACGCGGTCG GATGTAGCTG GCGGGAATTG
GCATACGGCG AATCCGCCTG ATTGGACGAC TCTGAGGATA CCGGATTTGA AGCCAAAGGT
AGTGCTGCAT GGGGACGGGG CAGGGTCTGG ACCGACCAGG GCGGTCAAGT TTAACCCAAG
ATATAATTTG ATGGCGGTTG GTGGATATGA CCTGGTGAGT CACTCTACTC CACTGCTTGG
GGCGACAGCT GACGAGTGGA AAGACATTGT GGATGCCGAT AAAGGACGAA GAGGCGAGGT
TGGCCGCCGA GGGGTGGTAG ATGCTAGATT ATACATTTCA TTGCAACTTT ATGTGCTCTT
TTCTATTATC ATGTCATCTG CGCAAATGAA ACCTCGCGAC GAGCGACGAT TTATATAGGA
TGTGGTGTTG TGTGGTGCCT GAGAGCGAAT TGCCGATTTC GCAAGA
 
Protein sequence
MDTPGAGPSR QSSSAPAANN KLDPNVKPGT VLLTSDLLSS FQPAKRFKDA VLEPTSTPSG 
PKTHSVTTLT FDDTGDRLIS AGDDNQFILW DARKGKKIKS FYSKKYGIDH VRSTHKTGTI
LHASTQGGDH AVRYHSTHDN AYLAYFKGHT ARVRSIDMSP ADDSFVTAGD DGTVRLWDLR
ANACKGLVND VGGSAIAAMD NTGVVFAVAC SDTQTIMMYA TKTADVHPFI HQGLIDIALE
DISTPPPKPI FTSLHFSNNG QYLLVGTSSD VHYVLDAIYL TPLRRLVGHV GLERDAQGNK
GVEPRRGISG EELCWTADSN WVISGSANGE VVAWDLRPEP GQSQLTRSDV AGGNWHTANP
PDWTTLRIPD LKPKVVLHGD GAGSGPTRAV KFNPRYNLMA VGGYDLTLWM PIKDEEARLA
AEGW