| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00050 |
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| Symbol | |
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| ID | 3256313 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 19049 |
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| End bp | 23574 |
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| Gene Length | 4526 bp |
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| Protein Length | 1024 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638255225 |
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| Product | chitin synthase, putative |
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| Protein accession | XP_569357 |
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| Protein GI | 58264402 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.881569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGG GCGACATATA CCAGCCACCA GGCGGCTACA GCCCCGCCCG CCAGAACCAG
CGTCCCCCGC AGCCGCAGCC TTTCCCGCAG CAACCGTATC CTCCACCGCC TGCAGTCCAA
TATGGCGATC CCTTCAGCGC CCCCCCACAG CGGCCGCCTG CTGCTTCCCT CCAGAACATG
TCCCCCGCGT GGCACGAGCC CCCCCACGCG TCTCACCCTC TCCAGCCGAC GTCGCCGACC
GGCCCTCCAG CTCCCCGGTA CTCGCTTCCG ACGCAGTCAT TGTCCCCCTT CAACGGCTCC
CCGGCGTCTG CGCCCGCCCC AGCACCATAT ACGATGGGCT CACCGCCCAA TTCTCATCCG
CCTATGCATG CATCTCCGCC CCAGCACATT CGTTTCCACG CGAACCCGTC ACATCTTCCG
CCCCAGCAAC AGCCTGCCCC GTCATACTCG TATCCAAACG GCATTGATGA CCGTCTCACC
TCGCCGCCTC CTTTGTTGCC CCACCATTCA TCCCAGTCGT CCATGTCTGC CATGCCCGCT
CCAGTCCCAG ATAACATCAA CTACGGCCCC CCGTCTTATC CTCCTCAAGG GTATGGCAAC
GCCGCAGACG ACGATATGAA TGACTCCCGC CCTCTTCTTG CACACGCGGC GCCTGATTCT
CGGTTTGGTA TTCCTCAGTC AACAAGCGCA ATGTCCATGA CAGCTCCGGC CGTACGATAT
CAATTGAGCG ATGCAGGTGC TGGAGATATG GGCGTCACGA TGTACACGGG GAACGGTGAT
GCTGAAGGGC AGAATGGGTT TGGAACTGGT GACGGCGTAG GTGCGGGCGG TGAGGACGAG
GTCAATATGC ACTATGGACC CGTTCCAGCG AGGATCGTCA GGCGAAATAG GACGCAAAAA
CGCGTCCAGT GAGTTGGGTA TTCCTCTCGC ATTAGCCCAA CTAACCGTTC GCAGACTCTT
CCAGGGCCAT CTCGTACTTG ATATCGAAGT CCCTACAATG CTGCTCGAGC AGTGTCCAAT
TCGCCAGGGA AACGAATTCA CCAAACTGAG ATATACAGCG GTTACCTGTG ACCCAAATGA
CTTTGTTGAG GACATGTATA CTCTCAGACA ACGATTATAC GATCCACCCC GACAAACGGA
GCTTTTCATT GTCATTACAA TGTATAATGT TCGTCCTTCA CGTCTATTAT AATAACTCGG
TGCTAATGGC AGGCGTAGGA GGACGATATT TTGTTTTGTC GAACAATGCG AGGCGTGATG
CAGAATATTG CTCATCTTTG TACGAGGTCA AAAAGTAAGA CCTGGGGAGT GAACGGCTGG
AAAAAGGTAG ACTCTTTTTT TTTTTTTTTC AGATTCGCTC TCGAACTTTT GTATTCATGG
CCATGATAGG TGGTGGTGTG CATCGTTGCA GATGGTCGAA AAAAGATCAA CCCCCGAACT
CGATCTGTCC TCGCCGCGCT CGGTGTATAC CAAGAAGGTG TAGGTAAGAA CATGGTCAAT
GGAAAGCCTG TCACAGCACA CGTATACGAG TATACTACAC AATGTGAGTA GGACGCCCTG
CAGCAGTCAA GTTGGACGCT CATAAAGGTT AGTGTCGATA AACTCTAGTG GAAAGATTGG
GCCTGCCGGT TCAAATACGG TGCCAATCCA AATGTTGTTC TGCCTCAAGG TTCGTCGTCG
CGCAAGAGTC GTGTCTTTTG TCTTCTGATG CTGACCCGAC ACTGTAGGAG AAGAATCAGA
AGAAGATCAA CAGTCATCGA TGGTTCTTCA AGTAAGGCTG CCTCCTTGCA TTCGTTCTTC
TGGAGCTGAA GAATTACTTT CTAGCGCTTT TGGTGCTTGC CTTCGGCCAA ACGTTTGCGT
CCTTCTTGAC GTCGGTACGC AACCTGGACC CGATTCGATC TATCATCTTT GGAAGGCATT
TGATATTAAT TCGAGTGTTG GGGGTGCTTG TGGTGAGATT GTTGCGTTGA AGGGAATGTT
CTGGAAAAAT CTACTGAACC CTTTGTGCGT CTGGCGGGAC CTGGCCAATG TTGGATTGAT
GAACTGATGA CGATGGTAGA GTGGCAGCGC AAAACTTTGA GTACAAGATG AGTAACATTT
TGGATAAACC TCTCGAGTCG GTTTTTGGAT ATATCACCGT CTTGTTAGTC TCGTTATCAC
TGAACAACTC GACCATGAGC GGCACTGACA TGATTCATAT AGGCCGGGCG CTTTTTCCGC
GTATCGATAT ATCGCACTAC TCAACGACGA GAAAGGAAAC GGTCCCCTAA AGCAGTATTT
TGTTGGAGAG ACGATGCATG GTTCTGGTGC CGGTATCTTG TAAGTTTAAT ATCCCGTGAG
CTTTGGTGAC CTTCAAATTA ATGCCATCCT TGCAGCTCGT CCAATATGTA TCTCGCCGAA
GGTTTGTTTT CGTTTTTGAC TGGAAGATTC CCATTTCTTG CAATGACGAG CTGATCTCTC
GATAGATCGT ATCCTTTGTT GGGAGCTTGT GAGCAAGAGA CAATGTAAAT GGAAGCTGCA
TTATGTCAAG TCGGCCTATG CTATTACAGA CGTGCCGGAC ACGGTTGCTG AGCTGGTTTC
TCAAAGACGA AGGTGGGTGA AGCCCACGGT CGTTACAGTG ATCGGTGAGG CTGATACTCA
TGTTGCGCAG ATGGCTTAAT GGGTCTTTCT TTGCGGCCAT TCATTCTATC GTCCATTTCG
GCTATCTTTA TCGATCTTCG TGAGTGTATT CTGATTTAAT CTCACGCTTT TGCTGAAGCC
TGCAAAGCCA TTCATTTACT CGGAAATTCT TCCTGCACAT AGAGCTGGTC TATCGTAAGT
TGATTATGAG GGCTACCCTT GCGGAAAGGA GAATTAGTGA CAATCTATTT CAGAAACATT
GAACATGGTT TTCGCCTGGT TCGCTTTAGG GAATTATTTC ATTGCTTTCG TATGAGACCA
TCTTCAGTTA CGCCCACCGT CAGCTGATTT AAAGTATAGT TTGTTCTTAC CGAATCTCTC
AACTCCCTCG GCACTGCTTG GAAATACGTC AACACGCCCT TGCATTATAT CTATATTGCG
CTTTTGCTAT GGTGTTTCCT ATTAAGTTTG GGTAACAGGC CTGCTGGGTA AGTCTCATCT
TTTGAGTAGG AAATAGTTGC GATCAAAGAC TTTAACTAAT GAGCGGTACA GTTCTAAAAT
TGGCTACACT TCAAGTATGG TCGGATTCGC TTTGATCACA ATATATATGC TCTTTGCTGC
CAGTGAGTCC TTCATTACCC TTGGTTTACT TTTGGAGTCT GGCCGCTAAA CCCAGTCAGT
TTATTTGACG GTAAAAGGTG TAGAAGACAT CCAGGCGGCA GGCGAGGTAA CAGCGAGCAC
TGTACTTGGG AACAAAATCT TTAGGAATAT CGTAATATCG TTGTTGGCGA CATATGGTCT
GTATATTATC AGTTCGCTAA TGGCTCTTGA ACCCTGGCAT ATGAGTGAGT TGGTCTCACA
CCAGCTTACA GGCGATGGCG GTGTGTTGCT AATAGGTTGG GTAGTTACTT CTTTCTTTCA
ATATCTTTTA CTCGCCCCGT CGTACATTAA CGTACTCAAG TACGTGCTCA TATACCTGCT
TTTCTTCTAG AATCCCCTTA CTTACTGTTC CACAGCGTAT ATGCGTTTTG CAACGTGCAC
GATGTGGTAT GTTCAACTCT GCAATCCTTT TTTGTTCAGT GTCATTTGCT GACCCCGCCA
TTAGTCTTGG GGTACTAAAG GATCCGACAA AGTTTCTGAC GATCTTGGTG CCGTCAAGTC
CTCAGACGAC AACAAAGACG AAGTCACTGT TGATGTACCG ATTGAACAAA AGGATATCAA
TGCTGTATAC GCGGCAGAGT TGCAAATATT GGGAAACAAG GCTCCGAAAG AGGTGCGGGT
GGTTAACGAT GATCAGAAAC AAGAGGATTA TTATAAAAAC GTTAGGACGA ATGTGAGTTT
TCCCTTTTTT TTTTCGGTAA CTTGAAGAGG AAAATCCTGA TGTTGCGACC AGGTGTTGCT
GGCTTGGACA ATGACCAACG GGGCTTTGGT GGCTGCGATC TTGTGGGTAC TTTATTTGGC
AATAAGCAAA CGCTGACGGC CGTTTCAGGC AAGTTAGCGG TGGTGATAGT GCAGTAGCGA
CGACGTATAT GGGTGTCTTG TTGTAGTATG TCCATTGCTC TCTTATTCTC TTTTGGTTAA
AGCTTACGCT ACGTATTCTT CTACAGCACT GTAGCTGGTC TTGCCTGTAT GTCGCTCTCC
ACATTATGAC TGTCAAGCAC AATGCTGACG CCTTTCGTTG CAGTCTTCCG ATTCCTTGGA
TCTTCAGCAT ATCTTCTCGT TCGTCTGTTC GTGGGAGAGT AGGGGATAAT GAAATTTGAT
ACATGCTCTT GACTTGCATA TAATTTCACG TTACAAGTAA GTAATGCCCG ATATCTGGAG
ATTGGAAATT CCTTGATGGT TTATTGCCAG TTGTACGTCT GTTTGAGAGG AGGCGATGAT
GTTATGGTGT GTATAATGGG ATGACA
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| Protein sequence | MNPGDIYQPP GGYSPARQNQ RPPQPQPFPQ QPYPPPPAVQ YGDPFSAPPQ RPPAASLQNM
SPAWHEPPHA SHPLQPTSPT GPPAPRYSLP TQSLSPFNGS PASAPAPAPY TMGSPPNSHP
PMHASPPQHI RFHANPSHLP PQQQPAPSYS YPNGIDDRLT SPPPLLPHHS SQSSMSAMPA
PVPDNINYGP PSYPPQGYGN AADDDMNDSR PLLAHAAPDS RFGIPQSTSA MSMTAPAVRY
QLSDAGAGDM GVTMYTGNGD AEGQNGFGTG DGVGAGGEDE VNMHYGPVPA RIVRRNRTQK
RVQLFQGHLV LDIEVPTMLL EQCPIRQGNE FTKLRYTAVT CDPNDFVEDM YTLRQRLYDP
PRQTELFIVI TMYNEDDILF CRTMRGVMQN IAHLCTRSKS KTWGVNGWKK VVVCIVADGR
KKINPRTRSV LAALGVYQEG VGKNMVNGKP VTAHVYEYTT QLSINSSGKI GPAGSNTVPI
QMLFCLKEKN QKKINSHRWF FNAFGACLRP NVCVLLDVGT QPGPDSIYHL WKAFDINSSV
GGACGEIVAL KGMFWKNLLN PLVAAQNFEY KMSNILDKPL ESVFGYITVL PGAFSAYRYI
ALLNDEKGNG PLKQYFVGET MHGSGAGIFS SNMYLAEDRI LCWELVSKRQ CKWKLHYVKS
AYAITDVPDT VAELVSQRRR WLNGSFFAAI HSIVHFGYLY RSSHSFTRKF FLHIELVYQT
LNMVFAWFAL GNYFIAFFVL TESLNSLGTA WKYVNTPLHY IYIALLLWCF LLSLGNRPAG
SKIGYTSSMV GFALITIYML FAAIYLTVKG VEDIQAAGEV TASTVLGNKI FRNIVISLLA
TYGLYIISSL MALEPWHMIT SFFQYLLLAP SYINVLNVYA FCNVHDVSWG TKGSDKVSDD
LGAVKSSDDN KDEVTVDVPI EQKDINAVYA AELQILGNKA PKEVRVVNDD QKQEDYYKNV
RTNVLLAWTM TNGALVAAIL QVSGGDSAVA TTYMGVLLYT VAGLAFFRFL GSSAYLLVRL
FVGE
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