Gene CNB00550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00550 
Symbol 
ID3255640 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand- 
Start bp161413 
End bp162120 
Gene Length708 bp 
Protein Length131 aa 
Translation table 
GC content53% 
IMG OID638254708 
Producthistone H2A-1, putative 
Protein accessionXP_569065 
Protein GI58263310 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5262] Histone H2A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.331035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCCAACAAC CCTTCTACTA CTTTACCCAC TACCCAACCA ACACCCAACA CTTATTCACA 
ATGTCTTCTG GTGGCAAAGG CAAGGCTTCT TCCGAGACCA AGTCCTCTTC CCGATCTTCC 
AAGGCCGGTC TTCAGTGTGA GTCTAGTTGG TCTGCCATGC CCTTGATTAT GCGCTTACTG 
GGCTCTCCAG TCCCCGTCGG TCGTATCCAC CGTCTTTTGA AGAAGGGTAA CTACGCCCAG 
CGAATCGGTT CCGGTGCTCC CGTCTACCTC GCTGCCGTCC TTGAGTGTAA GTCGCGTCTT 
GTACTCGGTG GCCACTGGGA CAGTACACTG ACGCCACCCT TTTAGACCTT GCCGCTGAAA 
TCCTCGAGTT GGCCGGTAAC GCTGCCCGAG ACAACAAGAA GTCCCGTATC GTCCCCCGAC 
ACCTTCAGCT TGCCGTCCGA AACGACGAAG AGCTCAACAA GCTCCTCGGA TCTGTTGTCA 
TCTCTCAGGG TGGTGTCCTT CCCCACATTA TGGCCGAGCT CCTTCCCGTC AAGGTGAGTT 
ACCACTCTTC TCGTGGTTTG ATCAGCAGCT GATGATTATC GTAGACCAAG GGCAAGGCCA 
AGGCTTCTCA GGAGGTGTAA GGGGGTTGCT TCTTGTAGTG TTAGCTTTTT ATACTTCGTT 
TTCGCTATAC TTCTTTGACT CTGCGACGAT GCAGTGATGT TCCACATA
 
Protein sequence
MSSGGKGKAS SETKSSSRSS KAGLQFPVGR IHRLLKKGNY AQRIGSGAPV YLAAVLEYLA 
AEILELAGNA ARDNKKSRIV PRHLQLAVRN DEELNKLLGS VVISQGGVLP HIMAELLPVK 
TKGKAKASQE V