Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB00480 |
Symbol | |
ID | 3255597 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 136391 |
End bp | 139187 |
Gene Length | 2797 bp |
Protein Length | 772 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254700 |
Product | threonine-tRNA ligase, putative |
Protein accession | XP_569057 |
Protein GI | 58263294 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.3781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCCGCA GGCTCATACC GCACGCAGCC CGCTTTTCAC ATAGAACGCC CACTAGATAC ACATACCCCC TCCTCCAAGC AGCACGTACT ATGTCCGCGG AAGCTCACCC CGTCTCTTCC ACTTCAAAAC CCGCTCCCCC AGCCGAGGGT GTTAACCCCA TCACCCCTGC TGCTCATGAA GGCAAGAAGA AGGAGAAGAA GGAAAAGAAG GACAAGAAGG GCGGTGGCGT TTCCGGTCCT TTAGAACTCA GTCCTCCACC CGAGTTTTTC GCTGAGCGAC TCAAGATCTA TGACGAGTGG AAGGCAAAGT ACGACAAATT CGTTGCTGGT AAGTGTCCCG ATCTATGTCT ATACCTCTCA GTCGTGTGCA AAATGTATTG CCGAGTCCGG GGCTATCTTG TACAAGTTTG CCACCCACGG GCTGCAGCTC CAAGCCCAAG TGATCATTCG CAGAGCTGGA TTTGATGGAC TTCATAATGT TCTTTTAGAA ACAGTAAACG AACTGACATT GCGTAGAACA ACCTCGTGAA CCCATCACCA TCACCTTCCC CGACGGCAAG ACGGTACAGG CCACCTCGTG GGAGACCACC CCTCTTCAGC TTGCCAAAGA CATATCACCT TCTCTCGCTG ACCGAGTGAT CATCGCCAAG GTCAACAACC AGCAATTATG GGACTTGACC CGTCCTCTTG AAGCTTCTTG CTCTCTTGCT TTACTCGATT TTGACTCTCC CGACAACAAC TACGAAGCCA GACAAGTCTT CTGGCATTCT TCTGCCCATG TTCTCGGTGA AGCTTGTGAG AGACGATATG AAGGTTGCTG TCTCGGCTAC GGCCCTCCCC TTGAGGAAGG TGGTTTCTTC TACGACATGA GTCTCGCCAA TGGCCGCACG ATCTCCCAAG ATGACTACAA GCCTATTGAA GACGTCTGCA AGGCTGCTGT CAAGGAGAAG CAACCCTTTG AGAGACTCGA GTTGCCCAAG GAAGTCTTGC TCGAGATGTT CAAATACAAC AAGTATAAGC AACACTATAT CCAGGACAAG GTCCCTGATG GAACCTCTTC TACTGTCTAC CGATGTGGTC CCTTGATTGA CTTGTGTCTT GGTCCCCACG TTCCTCACAC CGGCCGTATC AAGTCCTTGG CTGTTACCAA GGTGAGAGTG GCGAGCCGGA TATCGGGCGT CTGCTGATGA TATCATACTA GAACTCTTCT TCTTATTTCC TTGGTGACGC CAAGAACGAC ACTTTCCAGC GAGTGTACGG CATGTCTTTC CCCGACAACG CCCAAATGAA GGAGTACAAG AAGTACCTCG AGGAAGCCGC CAAGCGAGAC CACCGAAAGA TCGGCAAGGA CCAGGAGTTG TTTATCTTTA ACGACCTTTC TCCCGGAAGT GCCTTCTTCT TGCCTATGGG TATGAGGATC TACAACACCT TGATGTCATT TATCAAGGAC GAATATTTCA AGCGTGGTTT CTCCGAGGTC GGATCTCCCA ACATCTTCAA CGCCAACCTC TGGAAGACTT CTGGTCATTG GCAAAACTAT GCCGAAGACA TGTTCCAACT TAAGGCTGAC GAAGAGCAGC TCGCTCTCAA GCCTATGAAC TGCCCCGGTC ATTGTTTGAT CTTTGATGCG AGGGAGAGGA GTTACAAGGA ATTACCTTTG AGGTTTGCCG AGTTTGGTGT GTTGCATCGA AATGAGGCTA GCGGTGCTCT TTCAGGTTTG ACCCGTGTCA GGCGATTCGT CCAGGATGAC GGCAAGTCTT ACAAGGTCCC ATTGTTTGAT GCATCGTGCG CTGACCTTCT CAATCCCTAG CCCACATCTT CTGTACCCCC GACCAAGTCG AAGCCGAGCT TTACTCTGCC TTTGAGTTCC TCGACGCCGT GTACAAGCCT TTCGGTTTCA CCTACAAAGT CGGTCTCTCT ACGCGTAATC CCAAGAAATG GATGGGCGAC CTTGAACTGT GGAACAAGGC TGAAGGCACC CTCCGAGAGG TTCTCGAGCA AAAAGTCCCT GGTAACTGGC ACGTCAATGA GGAGGATGCC GCGTTCTACG GTCCCAAGTT GGACTTCCAA TTGACGGATG CCTTGAAGAG GAGCTGGCAA TGTGGTACCA TCCAGGTGTG TCCGATCTCT CCCATTACAT CAAGCATCAC CATAATATTG TACTCATACC CATACTTAAT GTAGCTCGAC TTTAACCTCC CCGAGCGATT TAACCTCAAG TACCACTCTC CCGAACAAAA TCCCGACGGC ACCCAATTCG CTCGACCAGT CATGATCCAT CGTGCCATTC TCGGTTCCCT CGAGCGATTC ATCGCCATTA TCACTGAATC TACCGGTGGC AAGTGGCCTC TCTGGCTTTC CCCCCGACAG GTCGTCGTCA TCCCCGTCGC CAAGCCCTTC ACCGAGTATG CCCAAAAAGT GGCCAAAACT TTCCAGGAAG CTGGTTTGTA TGCCGAGGTG GACTTGACGG ATAACACTTT GAATAAGAAG ATTAGAAATG CCCAGACTGC TCAGTGGAAC TTTATCATGG GTAAGTCTCT TCTTTCTCAT TTCTGTACTT CTTTTTTTAG TAAAATGCTA ATCAAACTAT GCAGTTGTGG GGCAGGATGA ACTCGACGCC CAAGCTGTCA ACATCCGTAA CCGTGACGAT GAAGTACAAG GTCGAGAGGA GACTGTCGCG CTTAGCCGTG CTGTTGAGCA GATTGTCAAG TTGAAAGAAA GCAAGGCCGC TGTCAGCAAG TTTGAGTAAA AGTAGTCTAG ATAGTTTCGT TTTCTACAGC GAGATCAGTT CTTATCC
|
Protein sequence | MLRRLIPHAA RFSHRTPTRY TYPLLQAART MSAEAHPVSS TSKPAPPAEG VNPITPAAHE GKKKEKKEKK DKKGGGVSGP LELSPPPEFF AERLKIYDEW KAKYDKFVAE QPREPITITF PDGKTVQATS WETTPLQLAK DISPSLADRV IIAKVNNQQL WDLTRPLEAS CSLALLDFDS PDNNYEARQV FWHSSAHVLG EACERRYEGC CLGYGPPLEE GGFFYDMSLA NGRTISQDDY KPIEDVCKAA VKEKQPFERL ELPKEVLLEM FKYNKYKQHY IQDKVPDGTS STVYRCGPLI DLCLGPHVPH TGRIKSLAVT KNSSSYFLGD AKNDTFQRVY GMSFPDNAQM KEYKKYLEEA AKRDHRKIGK DQELFIFNDL SPGSAFFLPM GMRIYNTLMS FIKDEYFKRG FSEVGSPNIF NANLWKTSGH WQNYAEDMFQ LKADEEQLAL KPMNCPGHCL IFDARERSYK ELPLRFAEFG VLHRNEASGA LSGLTRVRRF VQDDAHIFCT PDQVEAELYS AFEFLDAVYK PFGFTYKVGL STRNPKKWMG DLELWNKAEG TLREVLEQKV PGNWHVNEED AAFYGPKLDF QLTDALKRSW QCGTIQLDFN LPERFNLKYH SPEQNPDGTQ FARPVMIHRA ILGSLERFIA IITESTGGKW PLWLSPRQVV VIPVAKPFTE YAQKVAKTFQ EAGLYAEVDL TDNTLNKKIR NAQTAQWNFI MVVGQDELDA QAVNIRNRDD EVQGREETVA LSRAVEQIVK LKESKAAVSK FE
|
| |