| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00430 |
|---|
| Symbol | |
|---|
| ID | 3255563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 123282 |
|---|
| End bp | 125881 |
|---|
| Gene Length | 2600 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 638254696 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569053 |
|---|
| Protein GI | 58263286 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.972638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAATTTATCT TCACCATGAT GCTGTCCTAT TAGCTCATCG TTCTCGCCTT TGCCACTCGC
AAATTTACAT TTCTCCAAAA ACCAGAAGCT ATAAAGCGGT TTCTGGGGTG ATTTTTCCTA
TTCTTATATA ATACACCTTC TTGCTTTTCT CTTTCATTTG TATTCGCTTT ACTATCTTCT
TGGGGCTTTT ATATTGACAG CATCCAGCTG GTTTTCCGAT AGATCCTGTC TGGACCGACA
AAATCAGGCC TGTAACATAT AAAAACCAAA CTCCTATTTT AGTACCTCTT TCACCATCTT
AGCACCAGCA TTAAGCAATC CGCTACGATG ACTGGTATCA TTTCGGAAGA GAAATACCTC
TACCTCCCGT CTTCCTCATC TACCGCCGCC AACACTCCAG CGGCAACTGA AGACAAGCAA
TTTGTCTTCC CTGCAAGTGG TCTTTCTCGT GCCACTAGCA AAATCTCGGA AACGTCAACG
GATGACAAGG AAAAAGAGAA AGATGAGTTA CAGTCTGGTC AGCAGACTCC AGTTGAAAAC
TACTTGCCGA CCTTGGAGTA TGTTCCTTCC CAGAAGGTGG TTTTATCCAA AAGCAAGAGG
ATCTTGCTGG GCACCGTCAT GATGAGTACC ACATTCGTTG CAGTAAGTTT GATGAAGAAA
TTGCCAAAGA ATCAGTGCTG ATTATTTCCA CAGTCTGCCA CTTTGTCTTC ATCTCTTCTT
TGTATCCCGA ACTCTGCAAA GGATTTGGGT ATCACCGAAT TGCAAGCCCA GTGGGTAAGC
CATTTTCTTT TAAGCGCAAG TAAAGCATGT AGAACTAATG TCCTCACAGA TCAGTTCAGC
CTACTCATTG GCCAATGGCT GTGGTCTTTT GGTATCTGGG CGATTGGCTG ATTTGTATGG
GAGGAAGTGG CTCTATTTGC TCGGTATGGC TGCTTTCTTG ATCTTGAATG TCATTTCTGG
TGTTGTTCGA GTGAGTCCTG GAGATAATTT CCTTTGAATC CGGTAATAAT GAGGTGCATA
GAACTATATC GGTATTTGTG TTCTTCGTGC CTTCGCTGGT CTTGCTATAT CTGTTGCCTT
GCCTGCCGCG TTCGGTATCA TCGGTGTCAC TTTCGACAGT GAACCCGGAA GGACCATCGC
TTTTGCCACT TTGGCCTTAG GCTACCCTGT CGGCTCTGGA CCAGGCATGA TCATTGCTGG
TGTGATTTCA AGTATAAGCG CGTAAGTTTA CATTTTACCA TTTCCGACTT TCACTGACTA
ATTTTATCGA CAGTCGCGCC TGGCAATATG TCTTTTTTAT TCTTGCTGGT CTTTCCTTAT
TCCCTGTTGT TGGCGGTGTG TTCTCCATAC CTCCGGAGCC TTCAAAAAAA CACAACGGAA
ACCGACAAGT CGACTGGATG GGCGCATTCC TCATCACTGC TGGTTTGAGT TTGTTCAGTT
TCGCACTCAC TCAGAGTGGT CTGGTCGAGA AGGGGTGGAG AACACCCTGT ACGTCATCAT
ATAACTCAAT TATGCGACTG GCATCTAATA TTCTCTCAGA TATTCCTGTC GTGCTTGTCA
TTTCCATTCT TTTGATCGTA CTCTACGGTT TCTGGGAGCA CTTCGTCGAA AAGAAGACCT
CTATCCCTCC ACTTTCAAGG CTAGCCATTT TCTCTCGCCG GCAATGGAAG GTCACTGCCA
TCTTGGTCGT CTCTTTCTTT GCCTATGTTC CCATTGCTGT AAGTCACCGT TCTAGCTCCA
AGCCAGCCCT CTGACGTTTC TCCCAGGGAT GGATGTACCT CACAACTATC TGGTTCCAGA
ACTACAAACA AGAGAGCGCT CTTATGAACG CTGTCCACAT CTTACCTGCT CCCATCGTTG
GTGTCATAGC TTGTGTGCTT GTTCCCCTCC TCGCCCCCAA GATTCGAGCA CCATATCTCT
TGATGTTCGG TGGTTTTTCG ACTGCTGCCG CCAATTGGCT CCTTGCCATT AGACCTGAGG
GTGAAATTTA TTGGGCTCAC GAATTCTTAT CTTGTGTGTT CAACCCCTTT GGTGCCGACT
TCACTGTCGG TATTGGCTCC GTTTTGATCT CTAACCTCGT TTCTGAGTAA GTATTTTTTA
TGCTACGTAC TGTTGCTAGC CTATGATACT AATCTCCGCT GTAGGGATGA ACAATCTCTC
GCGGGAGCTC TTTTCCAGAC CGCACTTCAA ATCGCCTCCA CTGTTGGCGT TTGCATCTGC
AGCCTTATGC AGACTGAAGT TACTTCCCAG TCAGGCTCCC TTCTCACAGG TCTGCGAGAC
ACGTTCTGGA TGTCTGCTGC TTTCTCTTGG ACTTGTAAGT ATTTCTCGTC ATGAAATTCT
GAGTTTCTTT GTGCTGACGG TGTAACAATA GCTGCTATCA TTGCGTTCAT CACCCTCAGG
AAGGTTGGCC TCGCTAAAGA TGTTGGAAAA AAAGAGTAGT ACATCTGGAA GATAAGCTTT
ATAATACCCC TATAGGGGAA AATATATCAT ATTAGAGTTA ACGGAACGGT GGTTTACGAC
GCTCAAGGAC AATCAATTTC GAAACAACAA TTTTTAGATC AATCAATAGA CTCAATATGT
GTTCCCAAAT CCTCAATAGA
|
|---|
| Protein sequence | MTGIISEEKY LYLPSSSSTA ANTPAATEDK QFVFPASGLS RATSKISETS TDDKEKEKDE
LQSGQQTPVE NYLPTLEYVP SQKVVLSKSK RILLGTVMMS TTFVASATLS SSLLCIPNSA
KDLGITELQA QWISSAYSLA NGCGLLVSGR LADLYGRKWL YLLGMAAFLI LNVISGVVRN
YIGICVLRAF AGLAISVALP AAFGIIGVTF DSEPGRTIAF ATLALGYPVG SGPGMIIAGV
ISSISARAWQ YVFFILAGLS LFPVVGGVFS IPPEPSKKHN GNRQVDWMGA FLITAGLSLF
SFALTQSGLV EKGWRTPYIP VVLVISILLI VLYGFWEHFV EKKTSIPPLS RLAIFSRRQW
KVTAILVVSF FAYVPIAGWM YLTTIWFQNY KQESALMNAV HILPAPIVGV IACVLVPLLA
PKIRAPYLLM FGGFSTAAAN WLLAIRPEGE IYWAHEFLSC VFNPFGADFT VGIGSVLISN
LVSEDEQSLA GALFQTALQI ASTVGVCICS LMQTEVTSQS GSLLTGLRDT FWMSAAFSWT
SAIIAFITLR KVGLAKDVGK KE
|
|---|
| |