| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA07030 |
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| Symbol | |
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| ID | 3253863 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 1905901 |
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| End bp | 1908927 |
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| Gene Length | 3027 bp |
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| Protein Length | 814 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638253025 |
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| Product | ATP-dependent RNA helicase prh1, putative |
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| Protein accession | XP_567020 |
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| Protein GI | 58259215 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGGATTTCTG GCATTAAAAC ACCGTACAGA AGCCTTGGCA GCGTCCAAAA AATTACAAAT
CATCGACATG ACTGTAGCCG CAAGCACTAG CAGCCAACTA CCGAGCTCCG TTAAGCCTCA
GCCTAGGGTG TCAAATTTCA ATGACTCTTC AGATGAGGAC GAAGCTGAAT CCACACCTAA
AGCCGAAAAA AAGAAGAAGA AGGTCAACAA TCTCGATGTC AATGGGGTAT ATTCACCGAA
AAGCCCAAAG AAGCGAAAGA TTGGCCAGGC GAATGGAGAT TTGGGCAAGG GGAAGAAGGA
CGGCGCTGAA GCAAGAAGAA GGGAAGCAGA AAGACTATTG GTGAAGCGTA AGGAACTCCC
ATTTTACCAA GGTATGTCGA AGGAATGCTC TTAGATTCCT ATCAATGCTA AAGTACTATT
AGGGAGACGG ATGATCTTGG AAGAAATCAT GGCAAATGAT ACTACAATCG TTGGTCCACA
TTCTGACTTT TACTGTTAAC TCTGACACCC TAAAGATCCT AGGCGAAACG GGTTGTGGTA
AATCCACCCA ACTTCCGCAG CTTCTGCGCA CCCACCCTGT CTCTGTCAAC CATTTCTCGC
CGTCTTCATC AAATCGTTTC CGAGGACCAT CCATTGCCAT TACCCAACCT CGACGCTTGC
CGGCTATAGC ATTGGCCAAC AGAGTATCCC AGGAGATGGG CTGTCAAATA GGGGGAGAAG
TAGGGTACAG TGTGAGGTTT GAGGATGTCA CAAGTCGAGA GACTCGGGTG CGGTACTTGA
CGGAAGGTGT GTTGATGAGG GAGTTGGCTG GGTCGGACCC CAAGATTTGC CCTCCCGAAA
AAGGAGCCAA TGGGACGGCG AACGGAGAAG ATGAAAATGA CTCCCACATG TCTGAGGGAC
AAGGTCTTAA CCTTCTACTC AACTACGACG TCGTCATAAT CGATGAAGCT CATGAACGTA
CACTCAATAC TGACTTCCTC TGTGGTGCTT TGAAGAGGGT TCAGCGGATA CGTAAAGACA
TTGCTCGCCG GCAAGCCGAA GAAGAATTCC AAGGGAAGGA GAAGATACCA GGCAAGAAAA
AGGTCAAGGA GTTGAAGCTA GTGATCATGA GTGCGACTCT TGATCCTACC AAGTTCAAGA
CATTCTTCGG AACGTAAGTA GCTCTACACA TCATACTGGG CACAGCTGAA TCAAATTAGT
GGCCGAGATG CGCTCTTAGT CAAAGGCCGA ATGTATGAAG TGGCTACACA GCACGTATTG
GAGCCTGTAG ACGATTTTAT CGAAGCAGCT GCTCGACAAG TCATGACAAT ACATTGTTCT
CCCGATAGTC CTGGTGACGT GCTGGTCTTC ATGCCGGGTC AGTTCTTGCC GCGAACCAGA
GTAAGGTTGT CGCTGATTCA TTACAGGCTC TGAGGAGATT GAGAATTGCG TAGAGCTTCT
TAAAAGAGTT TCCAAGCAGC TTGCTCCTGG ATCTCCCGCT CTTCAGGTTC TTCCCCTTTA
CGCCGCTTTG CCCCCCACTG CCCAATCCAA GATCTTCATT CCCACACCAG ACAACACCAG
ACGTGTCATC GTAGCGACCA ATATTGCCGA GACATCTATG ACCATACCGG GTGTGGCGTT
TGTGGTTGAC AGCGGTTTTA AGAAGGAAAA AGAATATGTG TTTAGGAATG CTGGGGCTTT
GGAACACTTG AGAAAGAAAG GAATCAGTAA AGCGTCAGCG TGGCAGAGGA CTGGTCGAGC
GGGACGAGAA GTTGGTTCGC TACGTCAGTT TGTCAGATAT ATGCTAACGA AGGTTTTTAG
AGAGCGGGAC ATTGTTATCG TCTTTTCACC CAGGATTTCT TCGACAAGAT GCCTGAATTC
GACGCCCCCG AGATTCAAAG ATGTAACCTT TCATCGGCTG TTTTGCAACT CATAGCGATG
GGACAAAACC CCTTTGAATT TGAGTACATT GATAACCCCG GTCGTGATTC AAGTGAGTTC
CGTCAACTCG ACCACGATAT GATCAACATC TAATAGCCAA CACAGTCCTT GCGGCATTCC
AAGAGCTTGT CGGTCTCTCC GCTCTTTCTT CTCCCACAAC CATTACGCCC CTCGGCCTCC
AAATGCTCCG ATTTCCTCTC GATCCTCCTC ACGCTCGTAT CCTCCTTGCT GCCTTTGAGT
ATGGATGTGC CAACGAAATC ATTGACATCA TCTCCCTTGT GAATGCTGGC GGTAATGTAT
TCATCGACCG ACCTAACGAT AGGGAAGAAG CTGCTCAGGC GCGACAAAAG TTTATTCATC
GCGAAGGCGA TCATTTGACG ATGATGAACG TTTTCAGGGC GTACACTGAG TTGAAGGAAT
CCAAGTCTTC TTCTCACAGC AACTCTTCCT CGCAGAGTTT GGTTGGCTGG TGCAAGGACA
ATCATGTCAA CTCAAAAACC CTCGCTCAGG CACTCAAGGT TCGCGAACAG CTTCGAGAGT
TGTCTGAGAG GCTAGGAAAG GATTGGAAGG CGAGTTGTGG GAGTGAATGG GGGATGGTTG
GGAGGTCTTT GCTGCAGGGT TTGTTCATGA ACACGGCGGT AATCCAAGCC GATGGCAGCT
ACAGACAGAC GGCCGGTAGC TTGGTAAGCT AGAGGTTCCT TTTTCTGAAG AGCTAAAAAC
TCATTCCTCG TACCGTAGAC CGTCAAGATC CACCCTTCAA GTGTATTGAT GAGCAAAAAA
GTACCTGCAA TCTTGTATGA TGAACTCGTA AGTCTTTATA GGACTTTCGG AAGGCCCACA
GCTTACTGGT ATGAATAGAC CATCACCACC GCGTTTTACG CTCGAAACGT CTCTGCTTTT
GAACAACATT GGCTTACAGA GGTACCATGG TTCGCGAAAG CTGGTACTAG TGTAGCTGCG
CCCGTCGGAA AGGGTAATTT ATAATATTCA GCACGAGAGA AAAGATGGGG TTTTTTGGGT
AAACTGGTCA ATAGCATAAT TTGTTACACA ACTGCAAATT TATCTTGGGT TAAATGCATA
TTTGGCATAC AATGAACAGA GATATCT
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| Protein sequence | MTVAASTSSQ LPSSVKPQPR VSNFNDSSDE DEAESTPKAE KKKKKVNNLD VNGVYSPKSP
KKRKIGQANG DLGKGKKDGA EARRREAERL LVKRKELPFY QGRRMILEEI MANDTTIILG
ETGCGKSTQL PQLLRTHPVS VNHFSPSSSN RFRGPSIAIT QPRRLPAIAL ANRVSQEMGC
QIGGEVGYSV RFEDVTSRET RVRYLTEGVL MRELAGSDPK ICPPEKGANG TANGEDENDS
HMSEGQGLNL LLNYDVVIID EAHERTLNTD FLCGALKRVQ RIRKDIARRQ AEEEFQGKEK
IPGKKKVKEL KLVIMSATLD PTKFKTFFGT GRDALLVKGR MYEVATQHVL EPVDDFIEAA
ARQVMTIHCS PDSPGDVLVF MPGSEEIENC VELLKRVSKQ LAPGSPALQV LPLYAALPPT
AQSKIFIPTP DNTRRVIVAT NIAETSMTIP GVAFVVDSGF KKEKEYVFRN AGALEHLRKK
GISKASAWQR TGRAGRERAG HCYRLFTQDF FDKMPEFDAP EIQRCNLSSA VLQLIAMGQN
PFEFEYIDNP GRDSTNTVLA AFQELVGLSA LSSPTTITPL GLQMLRFPLD PPHARILLAA
FEYGCANEII DIISLVNAGG NVFIDRPNDR EEAAQARQKF IHREGDHLTM MNVFRAYTEL
KESKSSSHSN SSSQSLVGWC KDNHVNSKTL AQALKVREQL RELSERLGKD WKASCGSEWG
MVGRSLLQGL FMNTAVIQAD GSYRQTAGSL TVKIHPSSVL MSKKVPAILY DELTITTAFY
ARNVSAFEQH WLTEVPWFAK AGTSVAAPVG KGNL
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