Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA04140 |
Symbol | |
ID | 3253369 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 1110685 |
End bp | 1112818 |
Gene Length | 2134 bp |
Protein Length | 610 aa |
Translation table | |
GC content | 54% |
IMG OID | 638252734 |
Product | tRNA dihydrouridine synthase, putative |
Protein accession | XP_566775 |
Protein GI | 58258725 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.663253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGTCGGTCCC AACCAGCGCC CATATAGGCG TACATATACG AGCAGCCTTA CGCCCCAATA TCAACTGTAC AGCTCGCGGA AACGGTTATT TCCGGAACAA CATGTCTGTA GCTGCTCAAG TCGTCAGCAG CGAGGGGCCA CAGAGTGTGG GGGACGAGTT ACAGACAAAG AAGCAGTTTC CTACTTTTCC AGCCCCGGGA AAACCGACGC ATGAAAAGCT GGGCGGATAT GATTTCTACA GATCGATCGG TAGTCCGAAA TTTGTGGTGG CTCCTATGGT TGACCAAAGC GAGCTTGTAC GTCGTCATTT TGATTGAAAA TGCACTGGCT CAAAACGTGG GGGGCTGACG CGCTATTTAC CAGGCCTGGC GTCTTCTCTC ACGGTCTCCT CTTCCTCCAG CTCTGGCCGG CCCATCTGAG ACAGTGACGA CGCCGCAAGG CAAGGCATAT ATCCGCCACC CCGGTGGTGC CCACGTCTGC TATACGCCAA TGATTCACGC AAAAGTGTTT GTGGATGCAA AAGGAGAAGG CGGACGTAAC GGAGATGGTC AATTTTGTCT GAGCCTAGAT GAAGAAGGCG GGGAGGGGAC TATTGGAGGG GTGGAGGGGG GTGACAGGCC TCTCATTGTG CAGTTTTGTG CCAATGATCC CGATATTTTG CTGGCAGCTG CGAAGAAGGT GGAGCATAGG TGTGATGCGG TGGATATCAA CTTGTACGGG CAACTTCATT GGCTGTATAG GATGCTTTTT TAGCTAACAA GGGAAAATCT AGTGGATGTC CCCAGGGCAT TGCCAAACGA GGTCACTATG GCTCTTTCCT CCAAGACGAA TGGGAGCTTA TACATAAACT CAGTAAGTCG CTTTTATTTT ATTTTTCAGC GTCTCCAGTC TCTGATCCTT GCTAGTCTCT ACACTTCACG AGAACCTGTC TGTCCCTGTG ACTGCAAAGT TCCGCATCTT CCCCGACCTC GACAAGACGA TCGCATATGC TCGTATGATG GAAGCCGCCG GCGCTCAAAT CCTTACTTGT CACGGCCGTA CTCGGGAGAT GAAGGGCCAG AACACTGGTC TTGCCGATTG GGAATATATC CGCGAGGTGA AGAAAGCTGT CAAGGTGCCT GTTTTCGCGA ATGGAAACAT ACTGTACAGG GAAGACGTGG ACCGGTGTAT GGAGGTGACA GGTTGCGATG GGGTGATGAC TGCAGAAGGC AACTTGTCCA ACCCTGCTAT TTTTATGCCG CCCGAACACC CTCACGCCCA TCCGCCTATA ACGGTGCTCG CCCACCGATA CCTCGATATT GTGGAAGCGC TTGATACGCC TACCGCAGGA AGCGCTATCA AGGCGCATCT TTTCCGACTT CTCAAACCTG TGCTCGACAC GGACGAGGAG CTACGGGTGC AGATTGCTAC CTGCCGATGG TCTGACGGTA TGGACGGTTT CCGTGAGATT ATCAGAGATA TTGAAAGACG GTGTGCACCT GTTCGTGAAG CTCTCGGAGC TGATTGGAGA CCGCCCACTG TTGATCCCAA GACGGGCTAT CGATCCCTCC CGATGTTTGC CGCTCAGCCC CAGATCCGTG CGAAACCCGT GTCGACCGAG ATTGGAGGTC ATGAAGATAT GGTATCGCGT CCCGTATCCC CCGGGAAAGA GGGTGAAGGC CGTATGTTTG ACACGCCCAA TATCACCACT GCGCCGGCGT CTTCCGTCCC CGGTACCGTC CTCTTTTCCC GATCACACCG CCACACCAGC TTAGGCCAGA CGGAGCGTTG CGTCCATTCG GACTGTACGG GTGTTGCGGC TACGCGATGT CCTACACGGG CATGTATTAC GCATTGCAGG ATATTGCGTG CGGTGGAAGC TGGGTATACG AGGGAAGAGG CTGAAGCGGA GGGTGCAAAG GGCGGGCTGG TTGGGATGGG CTGTGATGCG CATGAGGAGA AAGTGAGGGC GAGGAAGGAG AGGGAGGCGA GGAAGCGCAA GGGGAGAGAG ATGGCAAAGG AAAAGGCAAA GGAGAGGAAG AAGGAGGAAA AGGCAAAGGA GGAGAGAGAG AAGAGCAAGG AAAAGGTGGG GATGACGGAG GAGGAAGTAT CGTTTGCAGC CGGGTTGGCG TAGGTTGTGT AGCATGGTTT CTTT
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Protein sequence | MSVAAQVVSS EGPQSVGDEL QTKKQFPTFP APGKPTHEKL GGYDFYRSIG SPKFVVAPMV DQSELAWRLL SRSPLPPALA GPSETVTTPQ GKAYIRHPGG AHVCYTPMIH AKVFVDAKGE GGRNGDGQFC LSLDEEGGEG TIGGVEGGDR PLIVQFCAND PDILLAAAKK VEHRCDAVDI NFGCPQGIAK RGHYGSFLQD EWELIHKLIS TLHENLSVPV TAKFRIFPDL DKTIAYARMM EAAGAQILTC HGRTREMKGQ NTGLADWEYI REVKKAVKVP VFANGNILYR EDVDRCMEVT GCDGVMTAEG NLSNPAIFMP PEHPHAHPPI TVLAHRYLDI VEALDTPTAG SAIKAHLFRL LKPVLDTDEE LRVQIATCRW SDGMDGFREI IRDIERRCAP VREALGADWR PPTVDPKTGY RSLPMFAAQP QIRAKPVSTE IGGHEDMVSR PVSPGKEGEG RMFDTPNITT APASSVPGTV LFSRSHRHTS LGQTERCVHS DCTGVAATRC PTRACITHCR ILRAVEAGYT REEAEAEGAK GGLVGMGCDA HEEKVRARKE REARKRKGRE MAKEKAKERK KEEKAKEERE KSKEKVGMTE EEVSFAAGLA
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