Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA03560 |
Symbol | |
ID | 3253755 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 920683 |
End bp | 925951 |
Gene Length | 5269 bp |
Protein Length | 1450 aa |
Translation table | |
GC content | 49% |
IMG OID | 638252686 |
Product | conserved hypothetical protein |
Protein accession | XP_566696 |
Protein GI | 58258567 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00609757 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCCCGCCAC TCCGCCGCCC TTGCCCATGG CGAAGAAAAA GCTCTCCCTC AAGCGTAAGC CACACCCCGG CGTCCCCCGC TGACCGCCAG CCCAGAACAG GGGCTTTGCA ACCACTTCCC TCCCCAAAAA GGCGGCCCCG CCACCTGCTC CACCACCCGC GGACTCCCCG CCCGCCCCGC CACCCCAGGC CCCCCCGTCC TCCTCGCCAC CTCCCGCCGA CTGGGAGCAC GAGGAAGGTG CGGAGGAAGC CGCCCTCCAG AGTCTCGTCG ACAGGCTGCA GGACAAGGCT GAAAAGGAAG TCGCCCGCAT AGTAAAGGTA CGATCATGCC CTCCACCAAA AATGCAGATC TTACAGCCAT GATGTTCAGG CCATTGAATA CGACTCTCGT CTGGCAGCCT CGTTCCCCAA GCTTGATATC AACCAGGCCA TCCGAGATAC CGCCCTTGAG TTGGCATTGG AGGAAGAGAA AGCAGCCTGC CAAGGTGAAT GGCATCCAAG ACACGCAGAA AGAATCTCAC TGAACGACCT TTCGCAGATA CCGATCATCC TCCCGTCGTG ACCTTTCCAT CGACCACCGT TTCAGACTCA GATAAAGGAC TGTTGCGGTA CTTTGTCGCT TATCACGTTC TTCAAAATCT CGGCTTCCGA CAAGAGAGGA TTGAGCAATG CCTCCTACAA GGTATAAAAG AGGGAGAGGG CTGGGAAGAA GCTCTTGAAT GGGTGTGTCT GGTCGGCAAA AGGCTTTCAT TACTGACAAA TGTTACAGAT GTGGTTGCAT CTCAGCGAGG ATGAGTGCCT CCAACGAGGA GAGTATGAAA GGACAACCGG TACGCTTTGC TAGGTGAAGG AATGGACTGA CCTTGATTTT CAATTTTTTA GAGCCCAGTA TAACTGAGAA TCAGGAATCA CTCGTTCCCG CCATTGAACC GGACGTTGAA CCTATCGCTC AGCCCGCGCA GTCTTCAAGA CCCACACGAA CCGCACTGCA GGCCACTGAC GCCAGCACCG AAGCTCGCAC CACGGCCCAC AAATCACTAT TTCAAAGTCA AGATACATCG GATACCGAGT CTGACTCTGG AACTGAAGAC GAATACCACA TCAACGAGCA ATGGGCAAAA TTGCAGTTGG AACTTGATAC CCTTCGTATG GCGTCTGGAG AAGGGAAAAA AGGTAAAAAG GGAAAGGGTA ACCAAGTCAT ACTGGAAACG CCGGAGATAA GAAGGCTCAA GGACAAGATT GGCAAAGTGG AAAAGGAGTA CATGTTTACT CGCAAGAATG CCGGTGCGTT CCTTACAAAC CTTTATGTGC ATCCATTCTA ACTTACATGT AGATGCTATA CTCAAAGTTT TGAGAAATCA AAGAGATGTC GCAGCCATTG CCGCCAAGTT CAAGGGCGCT TCCATTCAGG ACGCTGATCA GACCGAAACC GATTCTCCTT CGGGAAATAC TCAAGGTGAT TCGATTGTAG AGGAAAAGAC TAACCTTATG GATGGGTCGT CTGACGAGGA GGGAGATCTT TTTGGTGGTA TGCTGGACGA GCCCACTACT CTCCCCGGTA CACCGGCTGA AACATCGACT TCAACACACA TTACAGTCCG ATCCATGCCC ATCCCAAAGC AAATGTCATT TGCTGGTACC ATTCCGAAAA ACGTTCTCAA AGCAGCCCTC GCCAAACAGA CAAAGCAGGT TGTCATATCG TATGTCAACT TATCTGGTGC CAGTCGCGCC GCAAGGGCTG GCCTGGAAAT TGGTTGGCAA GGAGGTGGAA GGAAGGTCTG GAAGATGGAT GATATTGCTT GTGATGATAT GGTTGAGGCG GAGAACTATG TGTCGACACT CGCACTCTCG GATTTAGAGG CAGAAAAAAC CGTTGCAGGA GTTAACTGGA GGACAATGCC GCCCTCATAC AGAGAATTAT GGGAAGAGCT GAAGGTGAAG AGGCAAGAAA GAGAGGACGA AAGTAGAAGG GGCATTTGGA AGATGATTAA GGGCATATGG GATAAGAAGG CCGTTGAAGC GACTGCAGAG AAGAACGACA CGTCAAAACC TAGCACTAGC AATACTCCGA TTGACCCACC TGCGAGGCCG GCGAAAGAGA AGGAAGACGT CATTATTCAA AAGCTTCAAG ATGATTTTGC CAAACGAAAA GAGTCATCAG CGTACCAGAC AATGCTTACT CAGCGCAACA CACTTCCGAT CGCTTCATTC CGTGATCAAA TCATTTCCAC TTTGGACACC AATCAGATCT TGGTGTTTAG CGGTGAGACT GGTTGCGGTA AATCTACTCA ACTACCGTCC TTCATCCTCG AAGACCAACT GGCCAGGGGA AAGCCTTGTA AAATAGTCGT GACCGAGCCT CGACGTATCA GTGCTATTTC CTTGGCTCAA CGAGTATCCC AGGAACTGGG CGATGCCCCA GGTGCGGTTG GCACCTCATC CTCGCTTGTT GGCTACAGCA TTCGTCTGGA ATCGAAAACT TCGGCCAATA CTCGTCTGTC ATTCGTGACG AATGGTATTG CACTTCGTAT GCTTGAGTCT GGTTCCAGCG GTAGTTCCAG AGGCACCGCA TTTGACGAAG TCACACATAT CATCGTGGAC GAAGTCCATG AACGTTCAAT CGAGTCAGAC TTTTTGCTCA TCGTTTTGAA GAATCTTTGT GAAGCAAGGA AAGATCTCAA GGTTGTTTTA ATGTCAGCCA CCGTAGATGC TGAGAAAATT TCGGCCTTTT TCGGAGGTTG CCCTTTCATG TCCGTACCTG GAAGAACGTT CCCTGTCACT GTGCAATATC TTGAAGACGC TGTTGAGCTC GCTGGGTGGC ACATCGACGG ATCTTCTCCA TATGCCATTC GAGGCAAGAA ATTCAAGCCA GCGAGTCAAA TGGTGGAGTG GAACGAAGAA GGGGCTAAAT CTGATTCGGA TCCAGACGAT GAAGACGAGG AAACAGCGTT TAACCCTGCA AAGCTGTCGT CAAACAAGTA CTCTGCTCAG ACAGTCGACA CTATCAATAT TCTGGATTCT CGATTAATTC CATATGATCT CATCGTCTTG CTGCTCGAGA AGATTTGCTT TGAAGCTGCC GATTATGTGC CCTTTTCTCA GGCAACTTTG GTATTCATGC CGGGCCTGGC TGAAATTAGA AAGCTGAACG ACATGCTGCT CGCCCATCCA AAATTCGGCA GTACGGACTT TGTGGTGTGG CCTTTACATT CCAGTATTTC TTCCGAGGGG CAGAGTGCGG TATTCAAGAG GCCTCCGGAA GGAGTGAGGA AGATTGTAAT CTGTGAGTCA TAGTTGTGAA TTGTTGAATT TCACTAACTT TTCTGATCTA GCTACCAACA TTGCAGGTGA GGACAACAAA AAGTCTCCAA TGACAAGCGC ATTCTAACCT GATTCTTTTC CCAGAAACTG GTGTTACCAT CCCAGATATC ACATGCGTTA TCGACACAGG AAAGCAGCGT GAAATGCGGT GAGTTTTATC CACAACCGTT TCTTCCCAGA AATTCATTAT GATGTTCTTT AGCTATGACG AGAAGCGACA GCTTTCGCGA TTTGTCGAAT CGTATGTTGC AAGAAGCAAC GCTAAACAAC GTCGCGGACG AGCCGGTCGT GTTCAGGAAG GCCTTGCGTT CCATTTGTTC ACCAAGGCCA GACATGATAC GCAGGCAGGT TTATTTGAAA TTACTATCAG GAAAATTCGG CTTATTCATT GTAGCTTCCT GATCATCCTA TTCCCGAGAT GCTTAGGCTC TCTCTCCAAG ACCTTGCTCT TCGTATCAAA ATTCTCAAAG TACCTCTCGG CAAGACTGTT GAATCTGTCT TGTTGCAGGC GCTTGATCCG CCTTCGTCGA TCAACATTCA ACGTGCTATC GCTTCTCTAG TTGAGGTCAA AGCGCTCACG CCAAATGAGG AGATCACACC CTTAGGACGG CTACTTTCCA AACTCCCCAT GGACGTCCAT CTCGGAAAGT TTCTACTTGT GGCCGCTATG CTTGGATGCC TAGACCCGGC TTTGACAATT GCAGCAACGT TAAACTCCAA AAGCCCATTT GTGACTCCGT TTGGCTTTGA GTCGCAGGCC AGAGCTGCTA AGCGGAGTTT TGCCATTGGT AGGTCTGGAT GTGTTAAGCA TGTAAATTTT CGTAGCTCAG TCGAGACTTT TCTTTTTAGG AAATAACGAC TTTTTCACTA TTGCAAACGT CTTTGCAAGC TGGAGAAGAG CTTCTGACAA TCCCCACTTT GTGAGAACTT TTTGTAAGAA AAACTTTGTA TCTCATCAGG TCTGTCATAT ATCTCTCAAT CTATGACTTT TATGTTGAAA TACTGATTTT GCGGATATAG AACCTGCAAC AAATTGAGGA ACTCAGACAG CAACTTCTTG CGTAAGTTTA CTCGGCTAGT ATTGATATGA AGTCCCGACA CTCATGGGTG CATATAGATA CCTCATTGAT ACATCTTTTG TCGATGCTAC GCCTGCTCAG AGGCAGGCGA TCAGCCAGTG AGTGCCAAGT GATGACTTCC AGTGCGAGCA TAAGATTAAT CGAAGTCGGA TTTCAGGGGC CGCTTCTCTC GTGGCGTGCG AACCAAATTT GTTCCTGTGC CTCCGGAATT GAACATCAAT GGAGAGGATC TGAAAGTAGT TGGAGCGGCC CTGGTTTCCG GTCTGTACCC CAAACTGCTA GCTCTCGATG CTTCTGGCGG CATGAAAACC ATAACAAACC AGCAACCAGT CGCAATTGTA CGTTGTTTGT GCACTTCACG TGGACTGCAA AAATCTGACA GCAATCACAG CACCCAAGTT CCGTCAACTT TAAAGTTCAC AAGGGCGAGT TTGGTTCAAA TTATCTGGCA TACTTTACCA TCATGCATTC CAAGAGATTG TATGCCTGGG AAACGGGACC AGTGGACGAC GCGGCGCTGG CGTTGCTATG TGGTGATATT GCAGACTTCA AGGTATGTCA TGGTCCGTTG TTGTTGTAAT AGAGGACTGA CTTTTAGCCA CGGACAGGTA TCAGCGTCCT CATTCATTCT TGACAGGAAG ATCAAATACA GCTTGTCGCC CAAGACGTCC ATCGCTATCA AACTGATTCG AGAGCAATTT TATCAGGTAA TGTCATTGCG CTTTAGAGGA AAGAAACTGT CAGACAACCA ACAAAGATGG TTTGAGCTTG GTCTCAAGTG TCTCGCAGCT GGACTGCAAG ACGAGGAGGC GGCGAAAATT TGTGTGGTAT AGAATATGTA GCACGTTTTT CACAGTTCCG CAATACAAC
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Protein sequence | MAKKKLSLKP QNRGFATTSL PKKAAPPPAP PPADSPPAPP PQAPPSSSPP PADWEHEEGA EEAALQSLVD RLQDKAEKEV ARIVKAIEYD SRLAASFPKL DINQAIRDTA LELALEEEKA ACQDTDHPPV VTFPSTTVSD SDKGLLRYFV AYHVLQNLGF RQERIEQCLL QGIKEGEGWE EALEWMWLHL SEDECLQRGE YERTTEPSIT ENQESLVPAI EPDVEPIAQP AQSSRPTRTA LQATDASTEA RTTAHKSLFQ SQDTSDTESD SGTEDEYHIN EQWAKLQLEL DTLRMASGEG KKGKKGKGNQ VILETPEIRR LKDKIGKVEK EYMFTRKNAD AILKVLRNQR DVAAIAAKFK GASIQDADQT ETDSPSGNTQ GDSIVEEKTN LMDGSSDEEG DLFGGMLDEP TTLPGTPAET STSTHITVRS MPIPKQMSFA GTIPKNVLKA ALAKQTKQVV ISYVNLSGAS RAARAGLEIG WQGGGRKVWK MDDIACDDMV EAENYVSTLA LSDLEAEKTV AGVNWRTMPP SYRELWEELK VKRQEREDES RRGIWKMIKG IWDKKAVEAT AEKNDTSKPS TSNTPIDPPA RPAKEKEDVI IQKLQDDFAK RKESSAYQTM LTQRNTLPIA SFRDQIISTL DTNQILVFSG ETGCGKSTQL PSFILEDQLA RGKPCKIVVT EPRRISAISL AQRVSQELGD APGAVGTSSS LVGYSIRLES KTSANTRLSF VTNGIALRML ESGSSGSSRG TAFDEVTHII VDEVHERSIE SDFLLIVLKN LCEARKDLKV VLMSATVDAE KISAFFGGCP FMSVPGRTFP VTVQYLEDAV ELAGWHIDGS SPYAIRGKKF KPASQMVEWN EEGAKSDSDP DDEDEETAFN PAKLSSNKYS AQTVDTINIL DSRLIPYDLI VLLLEKICFE AADYVPFSQA TLVFMPGLAE IRKLNDMLLA HPKFGSTDFV VWPLHSSISS EGQSAVFKRP PEGVRKIVIS TNIAETGVTI PDITCVIDTG KQREMRDSFR DLSNRMLQEA TLNNVADEPV VFRKALRSIC SPRPDMIRRQ LPDHPIPEML RLSLQDLALR IKILKVPLGK TVESVLLQAL DPPSSINIQR AIASLVEVKA LTPNEEITPL GRLLSKLPMD VHLGKFLLVA AMLGCLDPAL TIAATLNSKS PFVTPFGFES QARAAKRSFA IGNNDFFTIA NVFASWRRAS DNPHFVRTFC KKNFVSHQNL QQIEELRQQL LAYLIDTSFV DATPAQRQAI SQGRFSRGVR TKFVPVPPEL NINGEDLKVV GAALVSGLYP KLLALDASGG MKTITNQQPV AIHPSSVNFK VHKGEFGSNY LAYFTIMHSK RLYAWETGPV DDAALALLCG DIADFKVSAS SFILDRKIKY SLSPKTSIAI KLIREQFYQV MSLRFRGKKL SDNQQRWFEL GLKCLAAGLQ DEEAAKICVV
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