Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00790 |
Symbol | |
ID | 3253462 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 227301 |
End bp | 228587 |
Gene Length | 1287 bp |
Protein Length | 331 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252412 |
Product | exosome complex exonuclease rrp4, putative |
Protein accession | XP_566505 |
Protein GI | 58258185 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.937014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGCG TAAAAGCAGT AGCGCCGTCC ATTAGTCAAG CGTTCACTGA AATTGTGCCG TCAACACATC GCAAGCACCA AGCGGAACTC GATGCGATGG ATCTCGACGA AGATGAGTTT GGTGGCGCTG GACCTAGCAA AAGGTCTATT GTTAGCCCCG GAGAGGTTAT TACCAGCTCC AAGGAGTATA TGAGGTAAGA GATGTCCAAT GACCATTAAG GATCGTATTA AGCTATTTTT CAGAGGCCAT GGAACTTATG TCGAGGAGAG CAATGTCGTG TCCTCTGTCG CCGGTACGAT TGAGAGAGTA AATAAACTCA TTTCCGTCAG GCCACTTCGT TCAAGGTGGG TACATCCTTG TGAACATCCA TATGGAAAGG ATGGCCTTGT GTCGTGCTAA CATTTTGACT TCGAAAATTC AGATATACTC CAGAAGTTGG AGATCTCGTT ATCGGTCGAA TAGTAGAAGT GGGAGCGCAG CGATGGCGTG TAGATGCCAA CGGGCGTCAA GATGCTGTTC TGATGCTCTC AAGTGTCAAC TTACCGGGCG GTGTGCAAAG GAGGAAGATT GAGTCAGACG CTTTGAAGAT GAGAGAGTTT TTGGCGGAAG GAGATGTGAG CTTCTCAGCT ATGGCCACTG ATTTGTATGC TGTTACAGGA CTGACCGAGA AATAGTTGCT TGTTGCTGAA GTTCAAGCAT TCTTTGGAGA TGGAGCCATG TCATTACATA CGCGATCATT GAAGTACGGC AAAGTAAGTA TTTGTACGAT ATTCCAATAA ATGTACACTT ACACCGCTCT TGGCAGCTTC GTAACGGCTT TCTCTTGACC GTCCCTCCAC AGTTAATCCG TCGACTTAAA TCCCATTTCT ATCACATCCC TCCTCCTTGT GGCCCTACAG GTGTCGACGT TATCCTCGGG TTGAACGGTT ACGTGTGGGT GAGCAATGGA ACGTCACAGG CGCGACGGGA GGGTGGTGAA GGGTTTGACT CAGAAGGTGT TTACAGTAAC CAAAATGACG TGAGTCGCAT AGTATCCCAG TCAGGATTGA CTCTGACGGA TACACTCGCA GGAAATCCCT CCGCAAGGCA GAGAAGCCAT CTCCCTCGTT GCTAACATCA TCAAGGCTCT TGCTAGCGAA GGTGTTCCTC TTACTGAGAC TCTTATCGGC GAATCATACG CATGGGCGGA GAAAAATGTG CCATCCGGGT CAGGACCGTT TGATTCGGAG ACTGAGAGAA AAATGCTTAA CGAGATTGTC GGTTTGGAAT TTCTCGAATT TGCTTGA
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Protein sequence | MFSVKAVAPS ISQAFTEIVP STHRKHQAEL DAMDLDEDEF GGAGPSKRSI VSPGEVITSS KEYMRGHGTY VEESNVVSSV AGTIERVNKL ISVRPLRSRY TPEVGDLVIG RIVEVGAQRW RVDANGRQDA VLMLSSVNLP GGVQRRKIES DALKMREFLA EGDLLVAEVQ AFFGDGAMSL HTRSLKYGKL RNGFLLTVPP QLIRRLKSHF YHIPPPCGPT GVDVILGLNG YVWVSNGTSQ ARREGGEGFD SEGVYSNQND EIPPQGREAI SLVANIIKAL ASEGVPLTET LIGESYAWAE KNVPSGSGPF DSETERKMLN EIVGLEFLEF A
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